<Clone: Contig-U11729-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>
Dictyostelium discoideum cDNA Contig-U11729-1
Dictyostelium discoideum cDNA Project Home
Assembled
Chromosomal Location of Contig-U11729-1
<
more Chromosomal info
>
| Chromosome Number |
3 |
| Length |
6358359 |
| Start Poin |
1,976,731 |
| End Point |
1,977,583 |
| Strand |
PLUS |
Sequence Contig-U11729-1
CAAATTTAAA AAATCACTCT TCAATACAAT TCACATTAAT TTGTTTTTTG
TATCGTTTTT TTTTTTAAAT TAATCAATTT TTATTTTTAT TTTTAATAAT
TAAATATTTA AATAATAAAA AAAAAA---- ------AATT CGATGATGAC
GATGATGATA CCTATATGGA TGGTGATGGT TTAACAGGTG AAGATGAAAA
TCAAATTGAA GAGGATGAAG AAGAGGAAGA CGTTGATTTA ACAGAAGGTG
GTTTAGAAAT GAAAAAAATG ATTAAAAAAC AACAACAACA AAATGATTCA
GAGGATGATC TTGCTGATGA TGACGATAAA AAAGATAACA ATGGTGGTAC
TGGTGGTGGT GATGATGAGG ATGATGATGA AGATGATGAA GATCCAGATC
AAGATGATCT TTCAAATCTT CCAAAAGTAT TTGGAAAATC CAATGCAGAT
GGTACAACCA ATTCTTCGGT TAAAAAGGAG GATGACGGTG GTAAAGATTC
AAAATCCTCT AAAAAGAGTA AGAAAAAGGA TAAAGATAGC TCACCAAAAT
CAAAGGAAAA GAAATCTAAA AAGAATAAAT CCGATTCATC AGTCGATAAT
AGAGAATCTA AAAAGATTAA AAAAGAACCA TCTTCACCTC AAGCAGTCCA
GCCAAATTCT CCATCACAAC AACAACAACA ACAACAACAA AATATCGATC
CAAATGATCC TCCATTCACT GAAGAATATA TTAAAATCGT CTTACAAAAA
AGTAAAAAGG TTAAATCCTT AGATTTAATC AATATCTTTA AAGGTCCACT
AAAAAATCCA GATAACAAAC CAATTTTCCT TGCAATGGTT CATAATGTTG
CTCGTGTTGT TG
Translated Amino Acid Sequence Contig-U11729-1
<All Frames>
nlknhssiqftlicflyrfff*INQFLFLFLIIKYLNNKKK---
---FDDDDDDTYMDGDGLTGEDENQIEEDEEEEDVDLTEGGLEMKKMIKKQQQQNDSEDD
LADDDDKKDNNGGTGGGDDEDDDEDDEDPDQDDLSNLPKVFGKSNADGTTNSSVKKEDDG
GKDSKSSKKSKKKDKDSSPKSKEKKSKKNKSDSSVDNRESKKIKKEPSSPQAVQPNSPSQ
QQQQQQQNIDPNDPPFTEEYIKIVLQKSKKVKSLDLINIFKGPLKNPDNKPIFLAMVHNV
ARVV
Homology Contig-U11729-1 vs CSM-Contig
<more CONTIG info>
Sequences producing significant alignments: (bits) Value
Contig-U11729-1 (Contig-U11729-1Q) /CSM_Contig/Conti... 236 3e-62
Contig-U13049-1 (Contig-U13049-1Q) /CSM_Contig/Conti... 206 3e-53
Contig-U10073-1 (Contig-U10073-1Q) /CSM_Contig/Conti... 42 0.001
Contig-U04171-1 (Contig-U04171-1Q) /CSM_Contig/Conti... 42 0.001
Contig-U12531-1 (Contig-U12531-1Q) /CSM_Contig/Conti... 38 0.015
Contig-U12060-1 (Contig-U12060-1Q) /CSM_Contig/Conti... 38 0.015
Contig-U11893-1 (Contig-U11893-1Q) /CSM_Contig/Conti... 38 0.015
Contig-U11247-1 (Contig-U11247-1Q) /CSM_Contig/Conti... 38 0.015
Contig-U11196-1 (Contig-U11196-1Q) /CSM_Contig/Conti... 38 0.015
Contig-U06620-1 (Contig-U06620-1Q) /CSM_Contig/Conti... 38 0.015
Homology Contig-U11729-1 vs DNA
<more DNA info>
Sequences producing significant alignments: (bits) Value N
(BJ379142) Dictyostelium discoideum cDNA clone:ddc33l24, 3' ... 238 0.0 5
(BJ438684) Dictyostelium discoideum cDNA clone:ddv38m02, 3' ... 206 e-159 4
(BJ382164) Dictyostelium discoideum cDNA clone:ddc43h05, 3' ... 206 2e-75 2
(BJ420077) Dictyostelium discoideum cDNA clone:ddv38m02, 5' ... 78 7e-10 1
(GH581788) CCAS736.b1_c Aiptasia pallida clone CC7 holobiont... 44 7e-08 3
(BJ419698) Dictyostelium discoideum cDNA clone:ddv36l23, 5' ... 40 9e-05 3
(BJ419314) Dictyostelium discoideum cDNA clone:ddv35p15, 5' ... 40 9e-05 3
(Z37981) D.discoideum gene for protein kinase. 40 0.002 3
(FC226565) CAGF9226.fwd CAGF Nematostella vectensis Nemve Ea... 34 0.015 3
(BM169710) EST572233 PyBS Plasmodium yoelii yoelii cDNA clon... 40 0.018 2
Homology Contig-U11729-1 vs Protein
<more Protein info>
Sequences producing significant alignments: (bits) Value
(Q9SU25) RecName: Full=Transcription initiation factor IIF subun... 35 3.2
<Clone: Contig-U11729-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>
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