Homology Contig-U11714-1 vs DNA
Query= Contig-U11714-1 (Contig-U11714-1Q) /CSM_Contig/Contig-U11714-1Q.Seq.d
(950 letters)
Database: ddbj_A
108,600,042 sequences; 106,710,029,556 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ378583) Dictyostelium discoideum cDNA clone:ddc32n06, 3' ... 337 0.0 3
(BJ350488) Dictyostelium discoideum cDNA clone:dda40d03, 3' ... 323 0.0 4
(BJ350096) Dictyostelium discoideum cDNA clone:dda38n13, 3' ... 323 0.0 4
(BJ406771) Dictyostelium discoideum cDNA clone:dds36k08, 3' ... 323 0.0 4
(BJ379761) Dictyostelium discoideum cDNA clone:ddc35l22, 3' ... 323 0.0 4
(BJ353098) Dictyostelium discoideum cDNA clone:dda49a05, 3' ... 323 0.0 5
(BJ373026) Dictyostelium discoideum cDNA clone:ddc15l12, 3' ... 323 e-176 4
(BJ398300) Dictyostelium discoideum cDNA clone:dds11k23, 3' ... 317 e-170 5
(BJ398478) Dictyostelium discoideum cDNA clone:dds12h14, 3' ... 178 e-153 4
(BJ352829) Dictyostelium discoideum cDNA clone:dda48f01, 3' ... 323 e-151 4
(BJ351096) Dictyostelium discoideum cDNA clone:dda42d06, 3' ... 323 e-147 3
(BJ444197) Dictyostelium discoideum cDNA clone:ddv55g18, 3' ... 311 e-145 3
(BJ377231) Dictyostelium discoideum cDNA clone:ddc22i01, 3' ... 274 e-145 3
(BJ372868) Dictyostelium discoideum cDNA clone:ddc14l14, 3' ... 323 e-144 5
(AU052310) Dictyostelium discoideum slug cDNA, clone SLD126. 234 e-133 3
(BJ342772) Dictyostelium discoideum cDNA clone:dda1c18, 3' e... 323 e-121 3
(BJ437975) Dictyostelium discoideum cDNA clone:ddv35p23, 3' ... 323 e-118 2
(BJ345006) Dictyostelium discoideum cDNA clone:dda21e09, 3' ... 244 e-108 4
(BJ382715) Dictyostelium discoideum cDNA clone:ddc45l16, 3' ... 170 e-104 3
(BJ346548) Dictyostelium discoideum cDNA clone:dda24e07, 3' ... 163 e-104 5
(BJ377919) Dictyostelium discoideum cDNA clone:ddc26m10, 3' ... 170 9e-72 2
(BJ341201) Dictyostelium discoideum cDNA clone:dda5j18, 3' e... 170 2e-69 2
(BJ363649) Dictyostelium discoideum cDNA clone:ddc27a20, 5' ... 204 5e-48 1
(BJ362698) Dictyostelium discoideum cDNA clone:ddc23i01, 5' ... 204 5e-48 1
(BJ360589) Dictyostelium discoideum cDNA clone:ddc6j19, 5' e... 204 5e-48 1
(BJ325589) Dictyostelium discoideum cDNA clone:dda1c18, 5' e... 204 5e-48 1
(BJ324289) Dictyostelium discoideum cDNA clone:dda5j18, 5' e... 137 9e-28 1
(BJ374178) Dictyostelium discoideum cDNA clone:ddc6j19, 3' e... 88 8e-13 1
(AB055060) Catharanthus roseus gene for alternative oxidase,... 48 0.12 2
(AB009395) Catharanthus roseus mRNA for alternative oxidase,... 48 0.65 1
(EG560280) CR03002A02 Root CR03 cDNA library Catharanthus ro... 48 0.65 1
(GO292434) CAXN9926.fwd CAXN Teleopsis dalmanni Late larval ... 44 2.0 2
(AC079558) Mus musculus clone RP23-44P12, WORKING DRAFT SEQU... 46 2.6 1
(FH876923) OSB_523003xe14r1.ab1 OSB_523 Nicotiana tabacum ge... 46 2.6 1
(EJ854496) 1093017910250 Global-Ocean-Sampling_GS-30-02-01-1... 46 2.6 1
(EJ333858) 1092963461364 Global-Ocean-Sampling_GS-28-01-01-1... 46 2.6 1
(DU684824) Bst017360 lambda03 Boechera stricta genomic clone... 46 2.6 1
(DU678553) Bst011089 lambda03 Boechera stricta genomic clone... 46 2.6 1
(EY323661) CAWX9128.rev CAWX Helobdella robusta Primary Earl... 46 2.6 1
(EY308838) CAWX21252.fwd CAWX Helobdella robusta Primary Ear... 46 2.6 1
(EY293757) CAWX11304.fwd CAWX Helobdella robusta Primary Ear... 46 2.6 1
(CP001130) Hydrogenobaculum sp. Y04AAS1, complete genome. 46 2.6 1
(AC145576) Mus musculus chromosome Y clone RP24-103N13, *** ... 38 5.4 2
(AL358152) Human DNA sequence from clone RP4-768P8 on chromo... 38 5.5 2
(DY893177) CeleSEQ12447 Cunninghamella elegans pBluescript (... 32 6.6 2
(AJ314911) Dictyostelium discoideum DrnA gene for putative R... 38 8.4 2
>(BJ378583) Dictyostelium discoideum cDNA clone:ddc32n06, 3' end,
single read.
Length = 525
Score = 337 bits (170), Expect(3) = 0.0
Identities = 188/188 (100%)
Strand = Plus / Minus
Query: 130 aaactcaatcattatggactttattattatntgntcaaaagaattcatctttattaaatc 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 aaactcaatcattatggactttattattatntgntcaaaagaattcatctttattaaatc 466
Query: 190 cattatttaatcancaattatcaaatgaaacttnttntaccaccaatcttactgccanta 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 cattatttaatcancaattatcaaatgaaacttnttntaccaccaatcttactgccanta 406
Query: 250 caacacttacaaacacttcaactacacctagaaataccacaacacttacaaatgcctcta 309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 caacacttacaaacacttcaactacacctagaaataccacaacacttacaaatgcctcta 346
Query: 310 ctacacct 317
||||||||
Sbjct: 345 ctacacct 338
Score = 323 bits (163), Expect(3) = 0.0
Identities = 163/163 (100%)
Strand = Plus / Minus
Query: 341 tactaccacaccaacaaaagatgaaactataaatgaatcagttcaagttaataatgataa 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 tactaccacaccaacaaaagatgaaactataaatgaatcagttcaagttaataatgataa 255
Query: 401 attgaaatctccaagtggtgatgatattaaacaagaacaagatgaaatgaatcaatttac 460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 attgaaatctccaagtggtgatgatattaaacaagaacaagatgaaatgaatcaatttac 195
Query: 461 atcacaacatccaaataatcaaatggaatcaagttcagaaatt 503
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 atcacaacatccaaataatcaaatggaatcaagttcagaaatt 152
Score = 133 bits (67), Expect(3) = 0.0
Identities = 67/67 (100%)
Strand = Plus / Minus
Query: 676 atgaaactataacttatagtatggaatcagattctcaatcttcaatttctcaaaatcaaa 735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 atgaaactataacttatagtatggaatcagattctcaatcttcaatttctcaaaatcaaa 40
Query: 736 accaatt 742
|||||||
Sbjct: 39 accaatt 33
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 108600042
Number of Hits to DB: 626,735,710
Number of extensions: 39387662
Number of successful extensions: 3056802
Number of sequences better than 10.0: 46
Length of query: 950
Length of database: 106,710,029,556
Length adjustment: 24
Effective length of query: 926
Effective length of database: 104,103,628,548
Effective search space: 96399960035448
Effective search space used: 96399960035448
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
Dictyostelium discoideum cDNA Project Home