Dictyostelium discoideum cDNA Contig-U11646-1

Assembled

Chromosomal Location of Contig-U11646-1

Sequence Contig-U11646-1

TTTTAAAAAT AAAATTTNTA ATAATAATAA NAAATTNGAA ACNCATTTTT
TTTAATAACA NCCAANCAAN CAANCAANCA AAACANCCAA AAAAAAGTAA
AAAAAAAAAC ---------- NNNNNNNNNA TTTTCAATTT AAAAAAAAAA
GAATCAAATA TATATATATA ATTTAAAGAT GTCAAACAAA GACCAAGAAA
TCAAAGAAGA AGCACCAGTT GCTATTGAAG ATCTTTCAAA CCCAGTTGTT
GTTGATTCAT ACAATGCTGC TGGTATTATT GCAAATAATG CAATTAAACA
TGTAATTTCA AAATGTGTTG TTGGAGCATT AGTTGTTGAT ATTTGTCAAT
ATGGTGATGA TTTCATTGAA GCAGAAGCAG CAAAAACATT TACAAAGAGA
AAGAATTTAG AAAAGGGTAT TGCATTCCCA ACATGTGTTT CAGTTAATAA
TTGTGTTGGT CATTTTTCAC CATTAAAAGG TAATACACGT ACATTGAAAC
AAGGTGATGT TGTAAAGATT GATTTAGGTT GTCATATTGA TGGTTACATT
GCAGTAGGTG CACACACCCA TTATCATTGG TAACACATCC AGCTGAATCA
ATGACTGGTA AGGTTGCCGA TGCAATTTGT GCTGCCCACT ACGGCATTGG
AAGCAGCATT AAGAATGATT CGTCCAGGTA AAACATCAAA ATGAAGTCAC
TCAAAGTCAT TGAAAAGATT TCCGATATGT ATGGCGTCAC CTAGTGTTTC
AGGTATTTTA TCACACGAAT TAAAACGTTT CATTATCGAT GGTGAAAAAG
TAATCTTCTC AAAGAATGAA CCATCACAAA AGATTCAAAC CTATGAATTC
CAAGAGAATG AAGTTTACTG CATCGATATC GTCATGAGCA CTGGTGAAGG
TAAAGCTCGT GAAGAAGCTG ATCGTCCAAC CATTTACAGA AGAAATTTAG
ATAGCACTTA CAAATTAAAA TCAAAGGCCT CTCGTGATTT CAAAGATCAA
ATCGTTAAAC GTTACTCTGC CCTTCCATTC CCATTAAGAA ACTTTGATGA
AAAAGTTAGC AAACTCGGTT TGGTCGAACT CGTTGAACAT CAAGTTTTAG
CCGCTTACCC AGTACTCTTT GATAGATCCG GTTGTGAAGT CGTTCAATTC
AAAACTACCG TTTTAGTCTT ACCAAATGGT AACCATAAAC TCATTGGTAC
TGAATTCCCA TTACCATTCG TTAGATCAGA ATTCTCTGTC ACTGATGATG
CCATCAAAGC TTTAATCGCT TCACCATTGA AAATTAATAA AAAAGCTGCC
AAAAAAGCTT ACCGCCACTA CCACTGATGT TAAAATGCAA TAAATTAATA
AATTAATAAA TTTTTAAAAA ATTTATGTAT AAAAAAAAAA AAATAAAAAA
TAAATAATAA TAATTGGGTN AAAAA

Translated Amino Acid Sequence Contig-U11646-1

LKIKFXIIIXNXKXIFFNNXQXXXQXKXPKKSKKKNXXX---

---FQFKKKRIKYIYII*rcqtktkkskkkhqlllkifqtqlllihtmllvllqimqlnm
*fqnvlleh*llifvnmvmislkqkqqkhlqreri*krvlhsqhvfqliivlvifhh*kv
ihvh*nkvml*rli*vvilmvtlq*vhtpiiigntss*indw*gcrcnlccplrhwkqh*
e*fvqvkhqnevtqsh*kdfryvwrhlvfqvfyhtn*nvslsmvkk*ssqrmnhhkrfkp
mnskrmkftasiss*alvkvklvkklivqpfteei*ialtn*nqrplviskikslnvtlp
fhsh*etlmkklansvwsnslnikf*pltqyslidpvvksfnsklpf*syqmvtinslvl
nshyhsldqnslslmmpskl*slhh*klikklpkkltatttdvkmq*inklinf*kiyv*
kkknkk*iiiigxk

Homology Contig-U11646-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U11646-1 (Contig-U11646-1Q) /CSM_Contig/Conti...  2296  0.0
Contig-U14422-1 (Contig-U14422-1Q) /CSM_Contig/Conti...    44  4e-04
Contig-U13936-1 (Contig-U13936-1Q) /CSM_Contig/Conti...    38  0.026
Contig-U11097-1 (Contig-U11097-1Q) /CSM_Contig/Conti...    38  0.026
Contig-U12741-1 (Contig-U12741-1Q) /CSM_Contig/Conti...    36  0.10
Contig-U12633-1 (Contig-U12633-1Q) /CSM_Contig/Conti...    36  0.10
Contig-U11727-1 (Contig-U11727-1Q) /CSM_Contig/Conti...    36  0.10
Contig-U11195-1 (Contig-U11195-1Q) /CSM_Contig/Conti...    36  0.10
Contig-U11103-1 (Contig-U11103-1Q) /CSM_Contig/Conti...    36  0.10
Contig-U10521-1 (Contig-U10521-1Q) /CSM_Contig/Conti...    36  0.10

Homology Contig-U11646-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AU270211) Dictyostelium discoideum vegetative cDNA clone:VS...  1130   0.0    6
(AU039500) Dictyostelium discoideum slug cDNA, clone SLA750.     1130   0.0    6
(BJ433685) Dictyostelium discoideum cDNA clone:ddv22k17, 3' ...  1130   0.0    3
(BJ432413) Dictyostelium discoideum cDNA clone:ddv18i18, 3' ...  1130   0.0    4
(BJ431305) Dictyostelium discoideum cDNA clone:ddv13n18, 3' ...  1130   0.0    5
(BJ430480) Dictyostelium discoideum cDNA clone:ddv7l09, 3' e...  1130   0.0    5
(BJ430346) Dictyostelium discoideum cDNA clone:ddv6n24, 3' e...  1130   0.0    4
(BJ377780) Dictyostelium discoideum cDNA clone:ddc25k22, 3' ...  1130   0.0    5
(BJ377531) Dictyostelium discoideum cDNA clone:ddc24o23, 3' ...  1130   0.0    6
(BJ377380) Dictyostelium discoideum cDNA clone:ddc24h12, 3' ...  1130   0.0    6

Homology Contig-U11646-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q1ZXG4) RecName: Full=Proliferation-associated protein A;            591   e-167
AF281652_1(AF281652|pid:none) Atriplex hortensis putative DNA bi...   265   2e-69
DQ519359_1(DQ519359|pid:none) Ammopiptanthus mongolicus cold-ind...   259   1e-67
EF146979_1(EF146979|pid:none) Populus trichocarpa clone WS01225_...   257   8e-67
EF085029_1(EF085029|pid:none) Picea sitchensis clone WS0291_E07 ...   253   1e-65
AF020787_1(AF020787|pid:none) Oryza sativa DNA-binding protein G...   252   2e-65
DQ995336_1(DQ995336|pid:none) Solanum tuberosum EBP1 mRNA, compl...   249   2e-64
AF049236_5(AF049236|pid:none) Arabidopsis thaliana putative tran...   246   1e-63
AK316789_1(AK316789|pid:none) Arabidopsis thaliana AT3G51800 mRN...   246   1e-63
AF360226_1(AF360226|pid:none) Arabidopsis thaliana putative nucl...   245   3e-63