Dictyostelium discoideum cDNA Contig-U11642-1

Assembled

Chromosomal Location of Contig-U11642-1

Sequence Contig-U11642-1

ATTTTTTATT TTTTATTTTT TAAACACATA AACATATAAA AATAATTAAT
ATTTATATCT ATATAAGAGA TATAGTAAAA TAAATTAAAC AATGCAAGAT
AACGTATCAC AAAGAAAATG GAATGTTGAA TCATCAAAAT CTGCAAACAA
TGCATTTAAC CCAATTAGAA GAATTGTTGA TAAGGGTGGA TTTAAACCAA
ACCCAAATAA ATCCACTATT TCATTATCAA TTGGTGATCC ATGTGTTTTT
GGTAATTTAA ATATTTTAGA TTATGCAAAT GATTTATTAA TTGAAAATAT
TAAATCAAGT AAATTTAATG GTTATCCACC TTCAACAGGA TACGAAATTG
CAAGAGAAGC AGTAGCAAAA TATGTTGAAA CACCAACATC AAAATTAACA
TCAAAAGATA TCATAGTTGC ATCAGGAGCA TCAGGTGCAA TTGAATTAGC
AATTGGAGTA CTTTTAAATG AAGGTGATAA TATTTTAGTT CCAAAACCAG
GTTTCCCATT GTATGAATGT ACAAGTAAAA CCAAATTTAT TAATGTCAAA
CATTATAATT TATTGGAGAA ACAAGGGTTT AATGTTGATT TAGAGCATTT
GAGATCATTA ATCGATGATA AAACCAAAGC AATCTTGGTT AATAATCCAT
CAAATCCATG TGGTATTGTT TATAGTAAGC AACATTTACT CGATATTATC
CAAGTTGCAA GAGAATATTG TTTACCAATT ATCGCCGATG AAATTTATAG
TGACTTGACA TTTGGTGAAC ATAAATTCTA TCCAATGGCA TCATTAACTG
ATAAAGTACC AATCTTGTCA ATTGGTGGTA TTGCAAAGAG ATTTTTAGTG
CCAGGTTGGA GATTGGGTTG GGTTGCAATT CATGATCGTG ATAATATTTT
CTCAAATGGT AGAATCATTG AAGGTTTGAT ATCTTTATCT CAAGTGATTT
TAGGTCCAAA TTCATTGGTT CAATCAATTT TACCAAAACT TTTAGATCCA
CAAAATACTC AAGTTAAAGA ATGGTGTTCA ACAATCACTA AAACTTTGGA
ATCTCATTCA AAATTAACCG TTGATATGTT ATCAAAAGCT AATGGTTTAA
AACCTGTTTG TTCCTCTGGT ACAATGTATC AAATGATTGA AATCGATTGT
TCAAAATATG AAGACATCGC TGATGATAAT GAATTTGTTG GTAAATTACT
CGAAGAACAA TCTGTTTTCC TTTTACAAGG TACCGTTTTT TCACTTCCAA
ATTTCTTTAG AATTGTTTTT TGTGCTCCAA TTGATAAATT AACTGAAGCT
TATGAAAGAA TTATTGAATT TTGTGAAACT CATAAAAAGA AATAAAAAAA
ATAAAAAAAA AGGTAATAAT AAAATATAA- ---------A CACTTTACAT
ATTCACACAC TCATATATAT AAACATTAAT AAATAAATAT TTAAATATGT
CTAAAATACA AAAAAAAGAT ACAGAACCAT GGGTAGCAAA ATATAGACCA
AAAACAGTTG ATGATGTTTC ATATCAAGAA GATGTTATTT CAGCATTAAA
GAAATCATTA AATACAGGAA ATTTACCACA TTTATTATTT TATGGACCAC
CAGGTACAGG TAAAACATCA ACAATTTTAG CTATTGCAAT GGATATATAT
GGACCAGAAT TAATGAAACA AAGAGTATTA GAATTGAATG CATCAGATGA
AAGAGGTATA GAAGTTGTAC GTACAAAGAT TAAAAATTTT GCAGGATATG
CAGTGAATAA AACTACAACG GGTACAAGTA ACCCAGGTGC AACTTTTAAA
TTGATTATAT TGGATGAGGC AGATAGTATG ACAACGGACG CTCAAGCAGC
ATTACGTAGA ACCATTGAAA CCACATCTAA AACCACACGT TTTTGTTTAC
TTTGTAATTA TATTTCACGT ATTATCGATC CATTAGCATC GAGATGCGCT
AAATTTCGTT TCAAACCATT GGACACAGTG GCAACCATTG AGCGTTTAAA
ATTCATTAGT CAACAAGAGG GTATAAAATG TGAAGAATCA GTCTACCAAG
CAATTCAAGT GGTTTCCAAT GGTGATATGC GTAAAGCTAT CACCTATCTT
CAATCAGCTT TTCGTTTCTT TGCTAATAAA ATCTCTGAAG ATGTCATCTA
TAATATAGCT GGTTCTCTAC CACCACAACT TATCAAACAG TTGGTAGATT
GTTGTAAAAA GAATTCTTTC GATAGATTAC AATCAATGGT ACAATCTATC
ATTGCTCAAG GTTATCCAGT ATCTCAAGTT ATCTCTCAAC TCTTTGATTA
CGTTTTAACA ACTAAAGATT TAAATCAATC TCAAAAATCT CATATCACCA
TGAAAATTGG TAATGTTGAT AGAAATCTAA TTGATGGTTC TGAAGAATTT
CTTCAATTAT TCGATTTATC TTCTTATATA ATGAAACAAT TAAATAATAA
TAGTACTTCA ACAAATGGTG ATGATATGTT AATTG

Translated Amino Acid Sequence Contig-U11642-1

ifyflffkhini*k*lifisi*ei**nklnnar*ritkkmec*iikickqci*pn*knc*
*gwi*tkpk*ihyfiinw*smcfw*fkyfrlck*fin*ky*ik*i*wlstfnrirnckrs
sskic*ntnikinikryhscirsircn*isnwstfk*r**yfssktrfpiv*myk*nqiy
*cqtl*figetrv*c*frafeiinr**nqsnlg**siksmwycl**atftryypsckril
ftnyrr*nl**ldiw*t*ilsngiin**stnlvnwwyckeifsarleiglgcns*s**yf
lkw*nh*rfdifissdfrskfigsinftktfrstkyss*rmvfnnh*nfgisfkinr*yv
iks*wfktclflwynvsnd*nrlfki*rhr****icw*itrrticfpftryrfftskfl*
ncflcsn**in*sl*kny*il*ns*KEIKKIKKKVIIKY---

---TLHIHTLIYININK*ifkyv*ntkkryrtmgski*tkns**cfisrrcyfsikeiik
yrkfttfiilwttryr*ninnfsycngyiwtrinetksiriecir*kryrsctykd*kfc
ricse*nyngyk*prcnf*idyig*gr*ydngrsssit*nh*nhi*nhtflftl*lyfty
yrsisiemr*isfqtighsgnh*afkih*strgykm*rislpsnssgfqw*ya*syhlss
isfsflc**nl*rchl*yswfsttttyqtvgrll*keffr*itingtiyhcsrlssissy
lstl*lrfnn*rfksiskisyhhenw*c**ksn*wf*rissiirfiflynetik***yfn
kw**yvn

Homology Contig-U11642-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U11642-1 (Contig-U11642-1Q) /CSM_Contig/Conti...  2478  0.0
Contig-U10033-1 (Contig-U10033-1Q) /CSM_Contig/Conti...    86  2e-16
Contig-U11744-1 (Contig-U11744-1Q) /CSM_Contig/Conti...    48  5e-05
Contig-U06536-1 (Contig-U06536-1Q) /CSM_Contig/Conti...    46  2e-04
Contig-U06544-1 (Contig-U06544-1Q) /CSM_Contig/Conti...    44  7e-04
Contig-U02608-1 (Contig-U02608-1Q) /CSM_Contig/Conti...    44  7e-04
Contig-U13240-1 (Contig-U13240-1Q) /CSM_Contig/Conti...    42  0.003
Contig-U12424-1 (Contig-U12424-1Q) /CSM_Contig/Conti...    42  0.003
Contig-U10713-1 (Contig-U10713-1Q) /CSM_Contig/Conti...    42  0.003
Contig-U05026-1 (Contig-U05026-1Q) /CSM_Contig/Conti...    42  0.003

Homology Contig-U11642-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ398815) Dictyostelium discoideum cDNA clone:dds2o10, 3' e...  1459   0.0    1
(C91185) Dictyostelium discoideum slug cDNA, clone SSJ785.       1407   0.0    2
(BJ402268) Dictyostelium discoideum cDNA clone:dds16e02, 3' ...  1366   0.0    1
(BJ400054) Dictyostelium discoideum cDNA clone:dds8k16, 3' e...  1350   0.0    2
(BJ373903) Dictyostelium discoideum cDNA clone:ddc5e11, 3' e...  1304   0.0    2
(BJ373938) Dictyostelium discoideum cDNA clone:ddc5b13, 3' e...  1265   0.0    1
(BJ341879) Dictyostelium discoideum cDNA clone:dda8f16, 3' e...  1263   0.0    2
(BJ387422) Dictyostelium discoideum cDNA clone:dds2o10, 5' e...  1209   0.0    2
(BJ377223) Dictyostelium discoideum cDNA clone:ddc22f02, 3' ...  1201   0.0    2
(C84771) Dictyostelium discoideum slug cDNA, clone SSF683.       1193   0.0    1

Homology Contig-U11642-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q54K95) RecName: Full=Tyrosine aminotransferase;          Short...   833   0.0
BC125947_1(BC125947|pid:none) Danio rerio tyrosine aminotransfer...   394   e-107
(Q8QZR1) RecName: Full=Tyrosine aminotransferase;          Short...   390   e-106
AK149526_1(AK149526|pid:none) Mus musculus adult male liver tumo...   388   e-106
AK090244_1(AK090244|pid:none) Mus musculus cDNA, RIKEN full-leng...   383   e-104
BC074414_1(BC074414|pid:none) Xenopus laevis hypothetical protei...   382   e-104
(Q58CZ9) RecName: Full=Tyrosine aminotransferase;          Short...   381   e-104
AF163863_1(AF163863|pid:none) Mustela vison tyrosine aminotransf...   380   e-103
(P04694) RecName: Full=Tyrosine aminotransferase;          Short...   379   e-103
AX575723_1(AX575723|pid:none) Sequence 1 from Patent WO02072848.      379   e-103