Dictyostelium discoideum cDNA Contig-U11536-1

Assembled

Chromosomal Location of Contig-U11536-1

Sequence Contig-U11536-1

ACTTAATTTT TTATAGATTG TTTTGAATTT CCACCAAGAG TTTCAAATTT
AACTTTATTA TCTAGTAATA GCGTTACATT AAACTCTAAT CAAACTATTG
GATGGGAAAT TGTAATTGAT AGTGGTGGTG GTATTAAAAT TAGTTATGTA
TTTATACATG TAATTTCAAA TTTAGATAAA AAAGGATACA CATTTGAATT
CTATCCAAAC TCTACCTCAT GGGAAACCAC AATTGGAATT GCTCTATCAC
CAGAAACAAC ACCATCACAA ATATTTAAAA TTTATAATGC AACTATTATT
GACGAAAGAG GAATTAGATC GGACCATATT GATAGTTTTA AAGTTGATGA
AATTTTTTCA AATCAAAGTC CAATTTATCC AATTTCAATT TCACCATTTT
ATTTATTTGA TCTTAGTTTA TTTAGCATAA CAGTTAATTC ACCATTCATT
ACTGAATCTG TTCCACCAAC AATTACACTT GTAACCCTAC CATTTGAAAA
TGTAGATGAT TTTTTACAAT ATTCAATTTT CTTTCAATTA GTGTCAACTG
ATAATGTTGG TATATTAAAA AGCCATATAC CACAAGTTTA TTTATCGCAT
TCATCAAACT ATGGAGATTT ACAAATTTTC CAATGTAATA CAGCTATTAA
TGATACGTCT GAAACAACTT GTAATTATTA TGTTACTTGT AAAGGTGAAT
ATGGTTATGG TATTCAAAAC CCTGTATCTG TTTTAGT--- -------CAC
CAATTTTAAA AAACAATCAA CATGTTTCAA ATATATCAGT AGCAATGGAA
TGGCATGACC AATCTACAAC TATTACATTT GCAAAACAAA ATTCTCACAA
TTAATCCATC AACTTTGAAA TATTATATTT CATTAGATAA ATACCCATTT
GCATCATCAT TAAATACACT TGATTTAATC ATTAAATCAA TGTTTAAAAG
TTCACAAACT GATGATGTAT GTGGCAGTAA AGGATTTTCA TTAAATGATG
GAAATGATTA TATGACATTA CAAATTGGAA CATACTCATT TGAAGGTAAA
TTTATAAAAA AAGCAATTAT CAATGGCAAT AGAATTGTAA CAATAAATAA
TAAATTATTA AATGAAAATC AACTAAATAG TAATTCAACT ATAACTAAAG
AAAAAGATTC ATCAAATCAA CTTTCATCCT TTATCTCAAT TGAAATACCT
CATTATGATT CAAATGTATT ATTAGATCCA AGTTTTTCAG TTTTATTAGA
TTCAAATGAA TCATATAAAA ACTCTGAAAA TTCAATTTGT ACTTCAAAAA
AATCCTCAAA ACTTACTACC GCTCAAATAA TTGCTATTGT TATTGTTTCT
GTAGTTTTTG TAATAATTCT AGCTCTCTTT ATAATCGTTA AATTTTCAAA
ATCTGATAAA TTTTTATCTA TAAGAATTTT CTATTATAAA TTATTTAAAC
GATTTAAGAA AAAGTATTAA ATTTATTTTT TAAAAAATAA TATTAAGTTG
TAAAATAAAG TTTAAAAAAT AGTTTTTATT AA

Translated Amino Acid Sequence Contig-U11536-1

t*FFIDCFEFPPRVSNLTLLSSNSVTLNSNQTIGWEIVIDSGGGIKISYVFIHVISNLDK
KGYTFEFYPNSTSWETTIGIALSPETTPSQIFKIYNATIIDERGIRSDHIDSFKVDEIFS
NQSPIYPISISPFYLFDLSLFSITVNSPFITESVPPTITLVTLPFENVDDFLQYSIFFQL
VSTDNVGILKSHIPQVYLSHSSNYGDLQIFQCNTAINDTSETTCNYYVTCKGEYGYGIQN
PVSVL---

---PILKNNQHVSNISVAMEWHDQSTTITFAKQNSHN*sinfeilyfir*ipiciiikyt
*fnh*inv*kftn**cmwq*rifik*wk*lyditnwnili*r*iykksnyqwq*ncnnk*
*iik*kstk**fnyn*rkrfikstfilyln*ntsl*fkciirskffsfirfk*ii*kl*k
fnlyfkkilktyyrsnncycycfcsfcnnssslynr*ifki**ifiyknfll*ii*ti*e
kvlnlffkk*y*vvk*slknsfy*

Homology Contig-U11536-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U11536-1 (Contig-U11536-1Q) /CSM_Contig/Conti...  2694  0.0
Contig-U11436-1 (Contig-U11436-1Q) /CSM_Contig/Conti...    40  0.007
Contig-U10756-1 (Contig-U10756-1Q) /CSM_Contig/Conti...    40  0.007
Contig-U10018-1 (Contig-U10018-1Q) /CSM_Contig/Conti...    40  0.007
Contig-U08768-1 (Contig-U08768-1Q) /CSM_Contig/Conti...    40  0.007
Contig-U06348-1 (Contig-U06348-1Q) /CSM_Contig/Conti...    40  0.007
Contig-U12148-1 (Contig-U12148-1Q) /CSM_Contig/Conti...    38  0.028
Contig-U12131-1 (Contig-U12131-1Q) /CSM_Contig/Conti...    38  0.028
Contig-U11520-1 (Contig-U11520-1Q) /CSM_Contig/Conti...    38  0.028
Contig-U11456-1 (Contig-U11456-1Q) /CSM_Contig/Conti...    38  0.028

Homology Contig-U11536-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ421902) Dictyostelium discoideum cDNA clone:ddv44o05, 5' ...   694   0.0    2
(BJ424254) Dictyostelium discoideum cDNA clone:ddv51j20, 5' ...   654   0.0    2
(BJ339305) Dictyostelium discoideum cDNA clone:dda64j19, 5' ...   644   0.0    2
(BJ443347) Dictyostelium discoideum cDNA clone:ddv52l13, 3' ...   525   0.0    5
(BJ443088) Dictyostelium discoideum cDNA clone:ddv51j20, 3' ...   422   0.0    5
(BJ420935) Dictyostelium discoideum cDNA clone:ddv40l24, 5' ...   670   0.0    2
(BJ441847) Dictyostelium discoideum cDNA clone:ddv48f03, 3' ...   549   0.0    4
(BJ357837) Dictyostelium discoideum cDNA clone:dda64j19, 3' ...   418   0.0    4
(BJ440606) Dictyostelium discoideum cDNA clone:ddv44o05, 3' ...   307   0.0    4
(BJ421903) Dictyostelium discoideum cDNA clone:ddv44o06, 5' ...   595   e-165  1

Homology Contig-U11536-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


AC116957_52(AC116957|pid:none) Dictyostelium discoideum chromoso...   451   e-125
AC116957_18(AC116957|pid:none) Dictyostelium discoideum chromoso...   130   2e-28
AC115680_4(AC115680|pid:none) Dictyostelium discoideum chromosom...   113   2e-27
AC116984_70(AC116984|pid:none) Dictyostelium discoideum chromoso...   125   4e-27
AC116984_63(AC116984|pid:none) Dictyostelium discoideum chromoso...   124   9e-27
AC116984_67(AC116984|pid:none) Dictyostelium discoideum chromoso...   117   1e-24
AC116984_134(AC116984|pid:none) Dictyostelium discoideum chromos...   113   2e-24
AC115612_9(AC115612|pid:none) Dictyostelium discoideum chromosom...   113   2e-23
AC116100_9(AC116100|pid:none) Dictyostelium discoideum chromosom...   100   3e-23
AC116924_8(AC116924|pid:none) Dictyostelium discoideum chromosom...   112   4e-23