Dictyostelium discoideum cDNA Contig-U11527-1

Assembled

Chromosomal Location of Contig-U11527-1

Sequence Contig-U11527-1

GAAAAAAAAA TAAACAAATA AATATTAATA TGCTCACACA CACTCACACA
AGATAATTTA TATAACTTAA ACAAAACTTT TTTTTTTTAA AGAATATTAG
AAATTATAAC AATAGTAGTA AAAATATAAA AAAAACAAAA TGACAGGACA
CACAGGAGAT GTTTCACAAG TTCACGATAT TGAGATTTTA GCATTAAATC
CAACTGTAAA TAAACATGCC ACTTTTAAAC CAACCATTGT ATCAAAAAAA
GATAAAGAAA ATTGGGCAAG ACTTGACCAT TGTAAAAAAG GATGTGAATT
AAAAAATGAT TTTGAAGATG TTAAACCAAC AACATTAACA GAGAGAGGAG
CATTATTTGA ATCAGCAAGA TGTTTAAAAT GTGCAGATGC ACCATGTCAA
AAAGGATGTC CAACTCAATT GGATATTAAA TCATTTATTA GTTCAATTTC
AACCAAAAAC TATTATGGAG CAGCAAAGAC AATTTTCTCT GATAATCCAT
TAGGTTTAAC ATGTGGTATG GTTTGTCCAG TTAGTTCATT ATGTCAATAT
GGTTGTAATT TAGCAGCAAC AGAAGAGGGA CCAATCAATA TTGGTGGTCT
TCAACAATTT GCCACTGAAG TATTCAAAAA GATGAATATT CCACAAATTC
GTGATCCATC CTTAACACCA TTGAGTCAAT TACCAGAGAG TTATAAAGCA
AAGATTGCTT TGATTGGTTG TGGTCCAACC TCAATTAGTT GTGCAACATT
TTTAGGTCGT TTAGGTTACA CAGATGTCAC CATCTTTGAA AAGGAACAAT
ACTTGGGTGG TCTTAGCAGT AGTGAAATTC CAAACTATCG TCTCAATTAT
GAAGTGGTTG AATTTGAAAT CAAGTTAATG AAAGATTTAG GTGTAAAAGT
TGAATATGGT AAACGTTTAG GTGAGAATGG CTTCACCGTT GAATCATTAC
AAAAACAAGG TTATGAAGCC ATTTACTTGG GTATTGGTAT GCCTGAACCA
AAGATTGATC CAGTCTTTAA CGAGTTGACA AGTGATCAAG GTTTTTTCAG
TAGTAAAGAG TTCTTACCAA AAGTTAGCAA AGCCTCAAAG GCTGGTATGT
GCGGTTGTAA ATCACAATTA CCACAACTCA ATGGTAGAGT TATTGTATTG
GGTGCTGGTG ATACCGCTTT CGATTGTGCT ACCTCTGCTT TCCGTTGCGG
TGCATCACGT GTTACCGTTT GTTTCCGTCG TGGTTTCTCT GATATGAGAG
CCGTTCCTGA AGAAGTTGAC ATTGCCAAGG ATGAACGTTG TGAGTTCCTT
CCATACGTTT TACCAAAACA AGTCATTAAA CGTGATGGAA AAGTTGTAGC
TATGGAATTC TATAAAACTG AAAAAGGTGA TGATGGTAAT TACTCTGTAG
ACGAAGATCA ATTCTTCCGT GTAAAATGTG ATTATATCAT CTCTGCTTTT
GGTAGTCAAA TTGGTAGTGT CGCTGAATCT TGTTCACCAT TACAATTCAA
TAAATGGGGT ACTGCAGACA TTGACCCAAT GACAATGACA AGTAAACATG
CCGAATGGTT ATTCTGTGGT GGTGATTTAG TTGGTAATGG TACAACCGTA
GAAGCTGTAA ATGATGGTAA AACCGCCTCT TGGAATATTC ATAAATATTT
ACAATCACTC CATGGTATTC CAATTCCAGA TGGTCCACCA CAATTACCAA
ATTTCTTTAC ACCAATTGAT CTTGTGGATA TT-------- --CTAGTGGT
CATCATTTTG GTCCAGGTCA AGGTGCTTTC CTTAACATTG AACTTATCTC
TGAAAAAACT TGTCACTATT GGTGTAAAGC TATCGGAGAA TTAAAGAGAG
ATTTCCCAGA TCGTATTGTT ATCGCTTCAA TTATGTGTGG TTTCAACAAA
GAAGATTGGA CTCAATTGGC TAAAATGGCT GAAGCATCTG GTGCCGATGG
TATTGAACTC AATCTTTCTT GTCCACATGG TATGGGTGAA AAAGGTATGG
GTTTGGCATG TGGTCAAGAT ACTGAATTGG TTTTCCATAT TTGTCAATGG
GTTAGAGCCG CCACTAGATT ACCATTCTTT GCAAAATTAA CTCCAAATGT
AACTGAAATT AAAGAGATCG CCAAAGCTGC ACATGATGGT GGTGCCGATG
GTGTTACCGC TATCAATACC GTCTCTGGTT TAATGGGATT AAAAGGTGAT
AGTAACGCTT GGCCAGCAAT TGGTGATGAG AAACGTACAA CATACGGTGG
TGTTTCAGGT AATGCTACTC GTCCAATTGC TTTACGTGCA GTTTCTTCCA
TTAGAAAATC TTTACCAGAT TATCCAATTA TGGCAACTGG TGGTGCTGAT
TCTGCTGATG CCACTATTCA ATTCCTCCAT TGTGGTGCTT CAGTAGTTCA
AATTTGTTCA TCCGTTCAAA ATCAAGATTT CACCGTCGTT CAAGATTATA
TCACTGGTCT TAAGACTTAT CTTTACATGC AATCTCGTGA AGATTTATTG
CAATGGGATG GTCAATCACC ACCAAATGAA ATCATAAACA AAAATCCAAA
ATTAAAAGGT TTACCAAAAT TCGGTAAATA TCTTTTAGAA CGTAATAGAA
TCGATACTGA AGAGAAACAA AACATTGATT TACAAAAAGT TAAGAATCCA
TTAGTACCAT CACCAAATCC AACTCATCCA GTTCCATCTC TCAAAGATCA
AATTAATCGT GCAATCCCAA GAATTGGTCG TCATGATGAT CTTAAACGTG
ATCAACAAGT AGTTGCTCTT ATCGATGAAG ATAAATGTAT CAATTGTGGT
AAATGTTATA TGACTTGTAA TGATTCTGGT TATCAAGCTA TTAAATTCGA
TGGTAAAACT CATATTCCAT TAGTCACTGA TTTATGTACT GGTTGTGATT
TATGTTTATC AGTTTGTCCA GTACCAGATT GCATTACAAT GGTACCACGT
GAAACAATTT ATGTACCAGA TAGAGGGTTT AACTGTCCAA AATTAAATAA
AAAAAAATAA AAAAAAAATA AAAAAAATTA TAAA

Translated Amino Acid Sequence Contig-U11527-1

kkk*tnky*yahthshkiiyit*tklfffkey*kl*q***KYKKNKMTGHTGDVSQVHDI
EILALNPTVNKHATFKPTIVSKKDKENWARLDHCKKGCELKNDFEDVKPTTLTERGALFE
SARCLKCADAPCQKGCPTQLDIKSFISSISTKNYYGAAKTIFSDNPLGLTCGMVCPVSSL
CQYGCNLAATEEGPINIGGLQQFATEVFKKMNIPQIRDPSLTPLSQLPESYKAKIALIGC
GPTSISCATFLGRLGYTDVTIFEKEQYLGGLSSSEIPNYRLNYEVVEFEIKLMKDLGVKV
EYGKRLGENGFTVESLQKQGYEAIYLGIGMPEPKIDPVFNELTSDQGFFSSKEFLPKVSK
ASKAGMCGCKSQLPQLNGRVIVLGAGDTAFDCATSAFRCGASRVTVCFRRGFSDMRAVPE
EVDIAKDERCEFLPYVLPKQVIKRDGKVVAMEFYKTEKGDDGNYSVDEDQFFRVKCDYII
SAFGSQIGSVAESCSPLQFNKWGTADIDPMTMTSKHAEWLFCGGDLVGNGTTVEAVNDGK
TASWNIHKYLQSLHGIPIPDGPPQLPNFFTPIDLVDI---

---SGHHFGPGQGAFLNIELISEKTCHYWCKAIGELKRDFPDRIVIASIMCGFNKEDWTQ
LAKMAEASGADGIELNLSCPHGMGEKGMGLACGQDTELVFHICQWVRAATRLPFFAKLTP
NVTEIKEIAKAAHDGGADGVTAINTVSGLMGLKGDSNAWPAIGDEKRTTYGGVSGNATRP
IALRAVSSIRKSLPDYPIMATGGADSADATIQFLHCGASVVQICSSVQNQDFTVVQDYIT
GLKTYLYMQSREDLLQWDGQSPPNEIINKNPKLKGLPKFGKYLLERNRIDTEEKQNIDLQ
KVKNPLVPSPNPTHPVPSLKDQINRAIPRIGRHDDLKRDQQVVALIDEDKCINCGKCYMT
CNDSGYQAIKFDGKTHIPLVTDLCTGCDLCLSVCPVPDCITMVPRETIYVPDRGFNCPKL
NKKK*kknkknyk

Homology Contig-U11527-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U11527-1 (Contig-U11527-1Q) /CSM_Contig/Conti...  5564  0.0
Contig-U13246-1 (Contig-U13246-1Q) /CSM_Contig/Conti...   434  e-121
Contig-U12917-1 (Contig-U12917-1Q) /CSM_Contig/Conti...    38  0.055
Contig-U11890-1 (Contig-U11890-1Q) /CSM_Contig/Conti...    38  0.055
Contig-U05107-1 (Contig-U05107-1Q) /CSM_Contig/Conti...    38  0.055
Contig-U12131-1 (Contig-U12131-1Q) /CSM_Contig/Conti...    36  0.22
Contig-U11043-1 (Contig-U11043-1Q) /CSM_Contig/Conti...    36  0.22
Contig-U10762-1 (Contig-U10762-1Q) /CSM_Contig/Conti...    36  0.22
Contig-U09452-1 (Contig-U09452-1Q) /CSM_Contig/Conti...    36  0.22
Contig-U09074-1 (Contig-U09074-1Q) /CSM_Contig/Conti...    36  0.22

Homology Contig-U11527-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AF545064) Dictyostelium discoideum dihydropyrimidine dehydr...  2811   0.0    1
(BJ386290) Dictyostelium discoideum cDNA clone:ddc57a24, 3' ...  1570   0.0    2
(BJ441559) Dictyostelium discoideum cDNA clone:ddv47h04, 3' ...  1530   0.0    2
(BJ437226) Dictyostelium discoideum cDNA clone:ddv33h17, 3' ...  1524   0.0    3
(BJ445320) Dictyostelium discoideum cDNA clone:ddv59j04, 3' ...  1509   0.0    2
(BJ382418) Dictyostelium discoideum cDNA clone:ddc44m16, 3' ...  1493   0.0    1
(BJ405076) Dictyostelium discoideum cDNA clone:dds30d15, 3' ...  1489   0.0    2
(BJ432350) Dictyostelium discoideum cDNA clone:ddv18n11, 3' ...  1459   0.0    2
(BJ407876) Dictyostelium discoideum cDNA clone:dds43n24, 3' ...  1449   0.0    3
(BJ437236) Dictyostelium discoideum cDNA clone:ddv33j15, 3' ...  1437   0.0    1

Homology Contig-U11527-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q55FT1) RecName: Full=Dihydropyrimidine dehydrogenase [NADP+]; ...  1895   0.0
AL356457_2(AL356457|pid:none) Human DNA sequence from clone RP11...  1159   0.0
A54718(A54718) dihydropyrimidine dehydrogenase (NADP) (EC 1.3.1....  1158   0.0
AK291217_1(AK291217|pid:none) Homo sapiens cDNA FLJ76825 complet...  1157   0.0
(Q12882) RecName: Full=Dihydropyrimidine dehydrogenase [NADP+]; ...  1157   0.0
BC131778_1(BC131778|pid:none) Homo sapiens dihydropyrimidine deh...  1156   0.0
(Q8CHR6) RecName: Full=Dihydropyrimidine dehydrogenase [NADP+]; ...  1151   0.0
BC080003_1(BC080003|pid:none) Xenopus laevis MGC81821 protein, m...  1040   0.0
BC042543_1(BC042543|pid:none) Mus musculus dihydropyrimidine deh...   976   0.0
(Q5R895) RecName: Full=Dihydropyrimidine dehydrogenase [NADP+]; ...   659   0.0