Dictyostelium discoideum cDNA Contig-U11510-1

Assembled

Chromosomal Location of Contig-U11510-1

Sequence Contig-U11510-1

CACTGTTGGC CTACTGGTAA AAAAGGATAA ACCTCAAGAG ATTAAACTAA
TAAATGAGGC ATTATCAATT TTGGAAATGC ATAATATCGT ATCGGATTTA
ATAACAACTC TAAGGGAGAG AAGAGATTAT CTCTCAAAAA CTGGTTTTAG
TAAAATCATT GGTTGGGTAC GTGATCCAAA ACCAAACTCT TTAATTGGCT
CAGGCAGTGG TAGTAGTATT GGTGGTATTC ATTTAGGTGT TGGTCATCAT
ACACCATTGG TTAATCATCA AGCCTTTATT GAATCANAAA ATCATGGCTT
CTGGTCATAT GGAAATGTCT TCAAATGCTT TTGCTTCAAA ACATAATTCA
ATTCCAAAGG AATGGCAAGA AATTTTCAAT GAAANTGGTA TCA-------
---NNNNNNN NNGATCAGCA ACAACTGTAT CTCAATCTTC ATTAATATTA
TTTGATAGTG ATGAACAATC ATTACGTTTA AGTGATAATA AAATCTACGA
AGATCTTGAT GATAATAATG ATGATGATGA ACAACAAATC GAAAATGAAT
ATCAAGAAGA GGAAACATTA GAAGAATATT GTGAAGGTGA CGAGCCAACA
CAATATTGTG AACTAAATGC TGATGAAGAT GAAGTAGAAG AAGAAGAAGA
TGACGAAGAA GAAGATGAAG ACGAAGACGA GGAAGGCGAA AGTGAAAGTA
ACGAAGAAGA ACAAGAAGAA CAAGCTCAAG GGGTAGATGG AAAACTCCAT
TGGTCACAAT TAAGTGAAAT GTTAAAGACA GAAGATTTTG TAAATACTAT
AAAACAAAAA TTAAGAGAAA ACAAAAATAA TTTCTCATTA AAAAAATAAA
TAATTTAATT CAATAGTTTA TTATTATTAT TTAAAATAAT AATAATAATA
ATAGTAATAA TAAAAATAAT AATTAATAAT AATTAATAAT AATAATAATA
AAAATAAAAA AATAACAATA ACCAACAAAT GGAATATTAA ATA

Translated Amino Acid Sequence Contig-U11510-1

llayw*krinlkrln**mrhyqfwkciisyri**ql*greeiisqklvlvkslvgyviqn
qtl*laqavvvvlvvfi*VLVIIHHWLIIKPLLNXKIMASGHMEMSSNAFASKHNSIPKE
WQEIFNEXGIXXX---

---SATTVSQSSLILFDSDEQSLRLSDNKIYEDLDDNNDDDEQQIENEYQEEETLEEYCE
GDEPTQYCELNADEDEVEEEEDDEEEDEDEDEEGESESNEEEQEEQAQGVDGKLHWSQLS
EMLKTEDFVNTIKQKLRENKNNFSLKK*ii*fnsllllfkiiiiiiviikiiinnn****
**k*knnnnqqmey*i

Homology Contig-U11510-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U11510-1 (Contig-U11510-1Q) /CSM_Contig/Conti...   767  0.0
Contig-U10858-1 (Contig-U10858-1Q) /CSM_Contig/Conti...    46  7e-05
Contig-U10720-1 (Contig-U10720-1Q) /CSM_Contig/Conti...    46  7e-05
Contig-U09729-1 (Contig-U09729-1Q) /CSM_Contig/Conti...    46  7e-05
Contig-U12528-1 (Contig-U12528-1Q) /CSM_Contig/Conti...    44  3e-04
Contig-U10817-1 (Contig-U10817-1Q) /CSM_Contig/Conti...    44  3e-04
Contig-U10384-1 (Contig-U10384-1Q) /CSM_Contig/Conti...    44  3e-04
Contig-U03678-1 (Contig-U03678-1Q) /CSM_Contig/Conti...    44  3e-04
Contig-U14746-1 (Contig-U14746-1Q) /CSM_Contig/Conti...    42  0.001
Contig-U13824-1 (Contig-U13824-1Q) /CSM_Contig/Conti...    38  0.018

Homology Contig-U11510-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ338389) Dictyostelium discoideum cDNA clone:dda61g08, 5' ...   767   0.0    1
(AU061902) Dictyostelium discoideum slug cDNA, clone SLG549.      410   e-141  2
(BJ356750) Dictyostelium discoideum cDNA clone:dda61g08, 3' ...   361   e-126  2
(AU061848) Dictyostelium discoideum slug cDNA, clone SLG328.      410   e-110  1
(BJ328890) Dictyostelium discoideum cDNA clone:dda30a03, 5' ...    42   0.004  2
(EE622689) CHWM9707.b1_F03.ab1 CHW(LMS) silverleaf sunflower...    54   0.011  1
(EE616933) CHWM4358.b1_L09.ab1 CHW(LMS) silverleaf sunflower...    54   0.011  1
(AC184238) Strongylocentrotus purpuratus clone R3-3011P5, WO...    44   0.031  4
(BJ414320) Dictyostelium discoideum cDNA clone:ddv18c19, 5' ...    48   0.034  2
(EA751183) Sequence 13042 from patent US 7368531.                  52   0.044  1

Homology Contig-U11510-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


AC116919_8(AC116919|pid:none) Dictyostelium discoideum chromosom...   139   5e-45