Dictyostelium discoideum cDNA Contig-U11507-1

Assembled

Chromosomal Location of Contig-U11507-1

NO HIT FOUND.

Sequence Contig-U11507-1

GTTTGCCATC AATTAGTAGT AATAGTAATA ATTCAAATTC ACCATCAACC
AACACAAGTG CAACAACAAA TTCAACAACA AATTCAACAA CAACAACAAC
AACAACGACA ACAACAACAC CACTAGTTGA AAGTGATATT GAACCACTAT
CAGAATTTAT ATTTATTGAA TATTTAATGG ATGAAAGTAA TTTATTATTA
AAGAGTATGG GTAAGCCAAA GAAATCATTC AAGACATTGA AATCATTCCA
TTATGGTAAA ATTTTAAATT GTGAAACTGA TGCCGAACAA AATATTGTAA
CTTTATCAAT TGATCATGAG GATTTATTAA TTAACACTCA ACAATCAACA
GAGATGGTTT TATTGATCAA TAGTTATATC TTTCATTTAT CAGCTGAAGC
AACCACTGGT ATTGCAAATA AGGATTATTC AATTCCAAAT AGTTCATTCT
CTTTCAAAGT TGGTAATCTC ATTACCAATA TCGTCCGAGG TGAAGAGGAT
TGGTGCACTG GAACATGTAA TAATCTCACT GGTAAATTCC CATTGGAATT
GGTTAATTTA ATCATTGAAA AACGTTCTCC AAACATTTTA CCATCAATAC
CATTAAATAG CAAATTGTAT AATAGACAAC AAAACAATAT TACCAATTTA
ATTTCAACCT ATGATAATAT TAATAATCAA TTAATTATTA ATAATAATAA
TATTCAACAA TTATTACAAC AACAACAATT ACAATTACAA CTTCAACAAC
AGCAACAACA ACAACAACAA CAACTATTAC TACAACAACA ACAACAACAA
CAAAGTGGTA ATAATTCACC ATCAAGAAAA TCATCACAAG CTGTTCAACC
ATCTCATAGA AATTCAATTT CAAGATCAAC ATCATCTTCA TCATCAGCTT
CATCAAATTC TACAACTTCA TCATCTTCAT CTTCATCTTC TTCAAGTGGT
GGAAAAGTTA AAGAAAGAAA ACAAAATAAT CATAATAGAG GTGAACCACA
ATTTTCTACT AAATTTGTTG AAAGTGGATC TAAACATCCA TTGATGCCAT
ATGCAGTCAA TAGATTCCGT TCATTGACAG CCTTTAAATT GGGTGATGCA
TTAAAACATT CATCAAATCC ACCCGATTCA AATAGTGCAT TCATTAGTGA
TTTACATCCA GATGATCGTG ATATCTTTTT GGATATTATG AAGTATATGG
ATGATTATCC AAAATTCCCA CGAGATAGAA AGACCAGATT ACTTCAAAAT
GTAATACAAC GTGGTATCGA TAAACCAAGT CTACGTGATG AAATTTATTT
CTTCCTATGT CGTCAATTAA CTTTTAATCT TCAAACACAA CTTCCAACAC
TTGCATCAGC ACGTAAAGGT ATGGTTTTGT TTAGTTTATG TTCTGGTTGT
TTCCCTTCGA CCGCTGAACT TTTCCCTTAT CTTCGTGAGT TCCTCTCGCA
AACTGAGAAT ATTTACTCTC AATATTGTAT AAAGAAATTA GAGACCACAT
CATTGAAAGG TCCTCGTCGT AATGCTCCAT CAAAGAAAGA GATATTGGCC
GTTAAAGAAC TTCGTCATAT TGTAGTTAGA ATTCATCTTG CCAATGGTCC
AATTAGAACT GTCGAAGTGA ATCCATCAAC AACTGCATTG GAAGCACTTC
GTGTTTTGGT CGATATTCAA GATATCATCT TTTGGAAAGA ATTTGCAATT
TTCAAAGAAT GGGATGGCGT TGAAAGAGCC CTCAAGGAAC AAGATAAACT
TTGTGATGTC CTTAAAGAGT TTGAAGATAA AGAGAGAAAN CAAAGAAAGA
ANCTCTTACC CGATGAAGAT CTAATCACTG GTAGATTCGT ACTTCTTAGA
AAGATTTGGA TTCCTCATAC TTCCTATAGT ATGAGCAATG GTATGTTGGA
GTTAATGTTT TATCAATATG TTCACGATGT TTTGGGTGGT CGTATCCCTG
GTTTAACCAT TGAAATCTCA CTACAATTGG CTGCACTTCA ATTACAAGCT
CAAGAAGGTG ATTACAATCC AGACACTCCA ATCATCTCTG AGGATACCGT
TTATCTTTGT ATTCCAGCAA CCTTGATTGG TCGTAAAGAA TTGTCCGATT
GGGTACAAGA TATCAATGAG GCTCACTCTT TGTTGGCAAA TCGTGATATC
ACTCCAGAGT TGGCGTTAAC CTCTTATTTA GAGCAATCAT CTGGTTTACC
TTATGCTGGT TCAACTTGGT TCTGTATCAA TACTAAGCGT GTTGCCACAA
TGGCAACTCA AATTTGGATT GGTATCAACC AAGGTTTCAT TGTTTTTTTC
AATGCTCTTA TGGAGAATGA ATTGGAACGT TTCGATCTTG ATGAAGTTTC
TGGTTTCACC TATAGAGATG ATTCTTTCTC TTTCCTAATT GGTGATCTCA
TTAATCCAAC TAGAAAATTA TTTTACACAA GTCAAGGTGA AGTATATAAA
TGAAATCTTT GAAACATTTA AATCACTTCC AAAAGTTGAT CTTTTAGAGT
TAGAAAGAAG AAAAGAAAGA AAAAGAGAAA GAAAAGAAAA AGAAAAGAGA
AAAGCTTTAA AACAACAATT AAGAGATGAA CAACAACAAC AATTGCAACA
ACAACAACAA GATTAAAGAA ATAAAATTAA AATTAAATA- ---------A
AAAAAAAAAA ACCCTTTAAA AAAAAAAAAA AAAAAATGTT TTTTAATTCT
TAATTCTTAA TTCCCTAATT CATAATAACA ACTTATCCCA TATTTATATT
TACACGGAAA TAAATAAATA TTATAAAATT TTTTTAATAT ACAATATATA

Translated Amino Acid Sequence Contig-U11507-1

fain******fkftinqhkcnnkfnnkfnnnnnnndnnntts*k*y*ttiriyiy*ifng
*k*fiikeyg*akeiiqdieiiplw*nfkl*n*crtkycnfin*s*gfin*hstinrdgf
idq*lylsfis*snhwyck*glfnsk*filfqsw*shyqyrpr*rglvhwnm**shw*ip
igig*fnh*ktfskhftintik*qiv**ttkqyyqfnfnl**y**siny****ystiitt
ttitittsttatttttttittttttttkw**ftikkiitscstis*kfnfkiniifiisf
ikfynfiifififfkwwks*rkktk*s**r*ttify*ic*kwi*tsidaicsq*ipfids
l*ig*ciktfikstrfk*cih**ftsr*s*ylfgyyevyg*lskiptr*kdqitskcntt
wyr*tkst**nlflpmssinf*ssnttsntcist*rygfv*fmfwlfpfdr*tfplss*v
plan*eyllsilykeirdhiiersss*csikerdigr*rtssycs*nsscqwsn*ncrse
sinncigstscfgrysryhllericnfqrmgwr*kspqgtr*tl*cp*rv*r*rekxkke
xltr*rsnhw*irts*kdldssyfl*yeqwyvgvnvlsicsrcfgwsypwfnh*nlttig
ctsitssrr*lqsrhsnhl*gyrlslyssnldws*rivrlgtryq*gslfvgks*yhsrv
gvnllfraiiwftlcwfnlvlyqy*acchngnsnldwyqprfhcffqcsyge*igtfrs*
*sfwfhl*r*fflfpnw*sh*sn*kiilhksr*si*mkslkhlnhfqklif*s*keekke
kekekkkkrekl*nnn*EMNNNNNCNNNNKIKEIKLKLN---

---KKKNPLKKKKKKCFLILNS*fpns**qlipylylhgnk*il*nffniqyi

Homology Contig-U11507-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U11507-1 (Contig-U11507-1Q) /CSM_Contig/Conti...  3033  0.0
Contig-U03947-1 (Contig-U03947-1Q) /CSM_Contig/Conti...    44  8e-04
Contig-U01607-1 (Contig-U01607-1Q) /CSM_Contig/Conti...    42  0.003
Contig-U11332-1 (Contig-U11332-1Q) /CSM_Contig/Conti...    40  0.013
Contig-U09658-1 (Contig-U09658-1Q) /CSM_Contig/Conti...    40  0.013
Contig-U06711-1 (Contig-U06711-1Q) /CSM_Contig/Conti...    40  0.013
Contig-U02210-1 (Contig-U02210-1Q) /CSM_Contig/Conti...    40  0.013
Contig-U00469-1 (Contig-U00469-1Q) /CSM_Contig/Conti...    40  0.013
Contig-U13860-1 (Contig-U13860-1Q) /CSM_Contig/Conti...    38  0.050
Contig-U12577-1 (Contig-U12577-1Q) /CSM_Contig/Conti...    38  0.050

Homology Contig-U11507-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ386689) Dictyostelium discoideum cDNA clone:dds10i06, 5' ...  1174   0.0    1
(BJ397904) Dictyostelium discoideum cDNA clone:dds10i06, 3' ...  1033   0.0    3
(BJ403696) Dictyostelium discoideum cDNA clone:dds25p24, 3' ...   839   0.0    3
(BJ382739) Dictyostelium discoideum cDNA clone:ddc45a19, 3' ...   755   0.0    4
(BJ401800) Dictyostelium discoideum cDNA clone:dds19n09, 3' ...   680   0.0    4
(BJ338178) Dictyostelium discoideum cDNA clone:dda60l11, 5' ...  1003   0.0    2
(BJ438425) Dictyostelium discoideum cDNA clone:ddv37k20, 3' ...   611   0.0    4
(BJ397892) Dictyostelium discoideum cDNA clone:dds10e06, 3' ...   650   0.0    3
(BJ389616) Dictyostelium discoideum cDNA clone:dds19n09, 5' ...   848   0.0    2
(BJ356465) Dictyostelium discoideum cDNA clone:dda60k11, 3' ...   545   0.0    3

Homology Contig-U11507-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q9U1M8) RecName: Full=Myosin-I heavy chain; AltName: Full=Class...    97   2e-18
AC116957_47(AC116957|pid:none) Dictyostelium discoideum chromoso...    97   2e-18
BC138338_1(BC138338|pid:none) Mus musculus myosin VIIB, mRNA (cD...    94   2e-17
(Q99MZ6) RecName: Full=Myosin-VIIb;                                    94   2e-17
AF242411_1(AF242411|pid:none) Mus musculus myosin-VIIb mRNA, com...    94   2e-17
BC172349_1(BC172349|pid:none) Synthetic construct Homo sapiens c...    93   5e-17
AB290181_1(AB290181|pid:none) Homo sapiens mRNA for MYO7A varian...    93   5e-17
AB290182_1(AB290182|pid:none) Homo sapiens mRNA for MYO7B varian...    93   6e-17
AJ404002_1(AJ404002|pid:none) Danio rerio mRNA for myosin VIIA (...    93   6e-17
AJ404001_1(AJ404001|pid:none) Danio rerio mRNA for myosin VIIA (...    93   6e-17