Dictyostelium discoideum cDNA Contig-U11431-1

Assembled

Chromosomal Location of Contig-U11431-1

Sequence Contig-U11431-1

AATGTTTTTT CTCTCCCTCT GTTGATCTTT TTTAGAGAGA AATGGTAACA
TTTAACCTTA AAAATGTAAC CGATGAACAC TATGATCCTT CTAATCTCAA
TCTGAAGACG ATTTCAATGG AACAGGCTTT AGAGTTAGAA GAACAGTCAA
AAGTTAATTT TTCATCTCCA GATTTTATGT TTCAATTTTT ATTAATGGAA
ACACTTTTAA TTAAAGAAGT TAAAAGGATA GAAGAAAGTA ACTATTGTAG
TTTAGAAAGA GGCGAAGGAC CATATGTAAA AATCAATTGG ACCCCAAATT
TTGAGGATTT CATTTCAAAC TCATTAAAAA TAACTGAATA TGAAATTGGT
GAAAATTTTC ATTTTAGAGA TAATTTATTT CCTAAAAACT ACTCACAAAT
GAAAAGAGAT AAAGCTAAAA AAAGTTTAGA ATCACTTAAT TTACTTAAAC
ACAAAGCTCG TAAAATGATA AGTGAGTTTC AAACATTAAA AGAACATTTA
AATGAAAAAA TTAGGGAAGT AGAGAGTAAC TATGCATTAA AAGTAAAGGA
GCATAATCAA ATATCCTCTG AAATAGAAAA CCTAGAGTCA CCTTTTGTTA
TTAGATGAGC CACAACAACA ATCATCTTCA CCACAAAAAC CACAACAACA
ACAGCAACAA CAACAACAAC AACAACAACA ACAATCTCAA AAGAAGGCTC
ACCATAAACA AAAATCACCA CCTCAAAAAA AACCACAACA ACCACAGCAA
CAACAACAAC CACCACCACA ACAACAACCA CCACCACAAC AACAACAACA
AAACTCTGTT GGAATTTTAC CAAAGATATT ACCATCAAAA AGTTTGGCTG
TATTACCTTG TTCTGTAAAG GATGCTGGTA ATTTATTGTT AAAATCTACA
CCAAGTAAGT TGCTTGCTGG TGCAGATTCA AAAGAAGAAC AATTTTTTGA
AATAGAGATT ATTCATCTTC ATAAATATAT TGAAACAATT GAATTGGAAT
TTGAATTACA AGTTTTGCCT GATCCCATAT CAGAGCATAA TCTTGTTCCA
ATCTCAACAG AACCACAAGA GATTCAACAA GGTGGAAGAG GATATAAACT
TAAATTTGCT ACAACTGAGT TTATAAAATC CCCTCATCAA ATGGTTACAC
TTGTACTTTG GGCAACAATT AAAGGTACAG AAATCTCAAG TAATGCAATA
CTAAAACCAA TTAAAATCAT CTCTCTACAT AATAGTTCCA ATAGAATAAA
TCAACAAAAC TATTGTGGAC TTGATGAAAA TTTACAAAAA AGAAGATCAC
AACTTCTCAT TAATATCCAT AAAGGTTGTA ATATTGATGA AACCATTAAT
AATATTAATA ATATTAATCA TAGTTTCACT CAATTATTTG GCACATTTGA
ATTTTATGAA CAGCAAATGA AAAAAAAGAT ATTAAAAAAA GAAATTAAAA
AGAAAGAATA TCAAATTAAA TATCCTTATC CTCCAGATTC TAGAACAGTT
GCAACACATT CAATTAATTT TAGAAAGACA GATGCTAATG GTAATTATGT
TTGTCATGGT GCTGTTGGTG CAAATAAAGT TGGTTATTTC TGGGTTTCTT
AAAAAATNGG GTAAGATTTT CCAATTC--- -------AAT AATAATAATA
ATAATAATAA TAATAATAAT AATACCAATA ATAATAATAA TAATAATAAT
AATAATAATA ATAATAATGA TNGCAGTAGT AATATTAATA ATAATACCAC
CAATAATAAT AATAATAATA ATAATAATAA TAATAATAAT AATAATAATA
ATAATAATAA TAATAATAAT AATAATAATA AGGTAGATAC TATAAATCCA
GGTAATCCAA ATCAAAGAAA TAAACAAGGT CAAACACCAT TACATTTATC
AACTCATTAT AGAATTGGAT ATGAATTTAC ACGTATCATT TTGAAGAAAA
AAGGAAACGT TTTTTTGAAA GATAATTTCG GACAAACTTG TTTCCATTTG
GCCGTGGAGA GATGTCATTC AACAATGGTT TTAAATCTAC TGAGATTGTA
TCCCAATCTG GTATTTAAAC AAAATAATCA TGGTCTCTAT CCTGTCCATT
TCGCAGCAAT GGATGACACG GTCGATATCA TTGATATTTT CATCGATCAT
CAAATTCAAC TACTGGAGAG AGACAAAAAC GCGCCTTTGT TTATCCTTTT
CCAAGATTCA GTCGGTATGA CCCCTCTACA CTGGGCTGCT TCACTGGGTT
TAACTAGTAT CTGCCAAAAG TTAGTCCAAT TTGGTGGTTG CAACATTAGA
GATTTTGAAG GTGAAACTGC AATTTTCAAA GCAATTCGTT CGGCAAACCC
TACAACTTTC CAATATTTCC TTAGTCTTCC CGAAGTTGAT ACCTCCATCA
TTAATTTCAA CGGTATGGGT ATAGAGTCTC TATTAAAATT TAGAAATGTT
AAAAAAATTC AACCAGAAAT TTGTCAATTC GNATCCAATA AACAATAAAA

Translated Amino Acid Sequence Contig-U11431-1

mfflslc*sflerngni*p*kcnr*tl*sf*sqseddfngtgfrvrrtvks*ffisrfyv
sifingntfn*rs*kdrrk*ll*frkrrrticknqldpkf*gfhfkliknn*i*nw*kfs
f*r*fis*klltnekr*s*kkfrit*ft*tqss*ndk*vsnikrtfk*kn*gsre*lcik
skga*snil*nrkprvtfcy*mshnnnhlhhknhnnnsnnnnnnnnnnlkrrltinknhh
lkknhnnhsnnnnhhhnnnhhhnnnnktllefyqryyhqkvwlyylvl*rmlviyc*nlh
qvscllvqiqkknnflk*rlfifinilkqlnwnlnykfclipyqsiilfqsqqnhkrfnk
veedinlnllqlsl*nplikwlhlyfgqqlkvqksqvmqy*nqlksslyiivpie*inkt
ivdlmkiykkedhnfslisikvvilmkpliiliiliivslnylahlnfmnsk*kkry*KK
KLKRKNIKLNILILQILEQLQHIQLILERQMLMVIMFVMVLLVQIKLVISGFLKKXGKIF
QF---

---NNNNNNNNNNNNTNNNNNNNNNNNNNNDXSSNINNNTTNNNNNNNNNNNNNNNNNNN
NNNNNNNKVDTINPGNPNQRNKQGQTPLHLSTHYRIGYEFTRIILKKKGNVFLKDNFGQT
CFHLAVERCHSTMVLNLLRLYPNLVFKQNNHGLYPVHFAAMDDTVDIIDIFIDHQIQLLE
RDKNAPLFILFQDSVGMTPLHWAASLGLTSICQKLVQFGGCNIRDFEGETAIFKAIRSAN
PTTFQYFLSLPEVDTSIINFNGMGIESLLKFRNVKKIQPEICQFXSNKQ*

Homology Contig-U11431-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U11431-1 (Contig-U11431-1Q) /CSM_Contig/Conti...  1237  0.0
Contig-U14471-1 (Contig-U14471-1Q) /CSM_Contig/Conti...    44  7e-04
Contig-U12801-1 (Contig-U12801-1Q) /CSM_Contig/Conti...    44  7e-04
Contig-U12371-1 (Contig-U12371-1Q) /CSM_Contig/Conti...    44  7e-04
Contig-U12147-1 (Contig-U12147-1Q) /CSM_Contig/Conti...    44  7e-04
Contig-U10909-1 (Contig-U10909-1Q) /CSM_Contig/Conti...    44  7e-04
Contig-U09690-1 (Contig-U09690-1Q) /CSM_Contig/Conti...    44  7e-04
Contig-U02933-1 (Contig-U02933-1Q) /CSM_Contig/Conti...    44  7e-04
Contig-U05833-1 (Contig-U05833-1Q) /CSM_Contig/Conti...    42  0.003
Contig-U11827-1 (Contig-U11827-1Q) /CSM_Contig/Conti...    32  2.8

Homology Contig-U11431-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ344095) Dictyostelium discoideum cDNA clone:dda18m10, 3' ...  1178   0.0    1
(BJ377565) Dictyostelium discoideum cDNA clone:ddc24g06, 3' ...  1160   0.0    1
(BJ398325) Dictyostelium discoideum cDNA clone:dds12c04, 3' ...  1158   0.0    1
(BJ376155) Dictyostelium discoideum cDNA clone:ddc21m10, 3' ...  1158   0.0    1
(BJ346008) Dictyostelium discoideum cDNA clone:dda29e19, 3' ...  1158   0.0    1
(BJ344134) Dictyostelium discoideum cDNA clone:dda18d16, 3' ...  1158   0.0    1
(BJ344069) Dictyostelium discoideum cDNA clone:dda18g10, 3' ...  1158   0.0    1
(BJ374615) Dictyostelium discoideum cDNA clone:ddc9f08, 3' e...  1152   0.0    1
(BJ347288) Dictyostelium discoideum cDNA clone:dda26l18, 3' ...  1150   0.0    1
(BJ347525) Dictyostelium discoideum cDNA clone:dda27i10, 3' ...  1114   0.0    1

Homology Contig-U11431-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


CP001404_1850(CP001404|pid:none) Sulfolobus islandicus Y.N.15.51...    65   1e-08
CP001102_1069(CP001102|pid:none) Candidatus Amoebophilus asiatic...    65   2e-08
BC148423_1(BC148423|pid:none) Synthetic construct Homo sapiens c...    59   9e-07
AY313897_1(AY313897|pid:none) Danio rerio ion channel NompC (nom...    57   3e-06
AE017196_489(AE017196|pid:none) Wolbachia endosymbiont of Drosop...    57   4e-06
AP008981_602(AP008981|pid:none) Orientia tsutsugamushi str. Iked...    56   6e-06
AY195855_1(AY195855|pid:none) Synthetic construct ankyrin repeat...    56   7e-06
CP001230_364(CP001230|pid:none) Persephonella marina EX-H1, comp...    56   7e-06
AF530574_1(AF530574|pid:none) Hemicentrotus pulcherrimus inv-lik...    56   7e-06
AP008981_1300(AP008981|pid:none) Orientia tsutsugamushi str. Ike...    56   7e-06