<Clone: Contig-U11415-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>

Dictyostelium discoideum cDNA Contig-U11415-1

Dictyostelium discoideum cDNA Project Home

Assembled

Chromosomal Location of Contig-U11415-1

< more Chromosomal info >

Chromosome Number 2
Length 8467578
Start Poin 3,391,393
End Point 3,392,698
Strand PLUS

Sequence Contig-U11415-1

CACTGTTGGC CTACTGGTAT TTTCAAAATC TTTGGTTTAG AATTCATGAT
GATTTAATCA TTTCATCATT TAAATTAATG GGGTCATTAG CTAGATGTAA
TACAAATGAA GTTTTCAATT TCTTTGCTCA AGGTAGTGCG CAATTTACAT
GGGCAAAATT ATTCCAAAAT TTTTCATCCT ATGCTCATGC TTTAAATAGT
ATTGAATTTA GTCAATCAAT TCAATCGAAT CAAATGAATT CATCAACGAC
TACAACTCAA CAAATTTCAT CAACTCCACA ACAACACCAA CAACATCAGC
AGCAACAACA ACAACAACAA GGTTATAATA ACCAACAAAT ACCAAATACA
CCATATCAAC AATTCCAACC AACAATGCAA TACCAAGGAC AACAATCGTC
AATGCAACAA AGTGTAGGAC AACAACAACA ACCTCAACAA CAACCTCAAC
AACAAAATAC ACCAAATACA CCAAATTCAA CAACAAGTTC AAATACAGCA
AATACAACAT CACCTGTAAA GATTACACAA TTATTATTAT CAGAGAAAGA
TAGTGATGCA CTTTCAAGTA TTTTCCAATT GATTTCAAGA TTGGTTGAAT
CTTCAATGGC AGTTGGAAAT GTATTTTTAA AGATTGGACC ATTGATTTCA
TTAGCATTTC AATTTGCAGT ATCACAAGTT GATTCAAAAT TAAAATCTAG
TGCATTATCA GTGATTACAT CATATTCTCA ATATCCAATT TATGTAGCTG
ATATTTGGAG ATTAATAAAT GAAACCAATC TATTCAATAG TGGTCTTAGT
GCAATTGGTG GGCTAAATGA ATTATCTTTC ACTCAACAAT CATTAGAGTT
GTTATTACAA TTGATTCAAC AATCATCATT CCTATTCGAT AAGAGTAATC
ATTATCAAGA ATCTTTGAAA CTCAAATCC- ---------- ---------C
AAACTATGAT CAACCCATTT CATTCATTAG ATATGCAAGT AATTCCGTAC
AATGGACAAT AGCTCAATTG ATTATGTTAT GTCTTTCAAA TATTAGTAGT
GGAAGATATA CATTGGCTCA CTTCCTATTG GGTTGTTCAT CAAATTTAGA
TCTTTCAAAG GATTTCATAC CAAATAGTAA ATCATGTTTA ACTTTGATCA
TAAAGAATGT TATGAATTCA CAATTCGTAG GGAGATATCC ACATTTGGTC
GATTGTTATC ATGAAATCAT TTGGAAAATG TCAAGTGATC CAATCACTTG
GAAACCAATG ATCAAATATA TTCAAGAGGA ATTTCCAAAC TATTATCATG
ATAGTTTATT AATATTAAGA AATGCAATTA CAATCAATGG TT

Translated Amino Acid Sequence Contig-U11415-1

<All Frames> 
LLAYWYFQNLWFRIHDDLIISSFKLMGSLARCNTNEVFNFFAQGSAQFTWAKLFQNFSSY
AHALNSIEFSQSIQSNQMNSSTTTTQQISSTPQQHQQHQQQQQQQQGYNNQQIPNTPYQQ
FQPTMQYQGQQSSMQQSVGQQQQPQQQPQQQNTPNTPNSTTSSNTANTTSPVKITQLLLS
EKDSDALSSIFQLISRLVESSMAVGNVFLKIGPLISLAFQFAVSQVDSKLKSSALSVITS
YSQYPIYVADIWRLINETNLFNSGLSAIGGLNELSFTQQSLELLLQLIQQSSFLFDKSNH
YQESLKLKS---

---XXXXNYDQPISFIRYASNSVQWTIAQLIMLCLSNISSGRYTLAHFLLGCSSNLDLSK
DFIPNSKSCLTLIIKNVMNSQFVGRYPHLVDCYHEIIWKMSSDPITWKPMIKYIQEEFPN
YYHDSLLILRNAITING


Homology Contig-U11415-1 vs CSM-Contig

<more CONTIG info> 
Sequences producing significant alignments:                        (bits)  Value


Contig-U11415-1 (Contig-U11415-1Q) /CSM_Contig/Conti...   833  0.0
Contig-U13873-1 (Contig-U13873-1Q) /CSM_Contig/Conti...    46  1e-04
Contig-U10989-1 (Contig-U10989-1Q) /CSM_Contig/Conti...    46  1e-04
Contig-U10363-1 (Contig-U10363-1Q) /CSM_Contig/Conti...    46  1e-04
Contig-U14248-1 (Contig-U14248-1Q) /CSM_Contig/Conti...    44  4e-04
Contig-U11819-1 (Contig-U11819-1Q) /CSM_Contig/Conti...    44  4e-04
Contig-U11511-1 (Contig-U11511-1Q) /CSM_Contig/Conti...    44  4e-04
Contig-U10823-1 (Contig-U10823-1Q) /CSM_Contig/Conti...    44  4e-04
Contig-U13297-1 (Contig-U13297-1Q) /CSM_Contig/Conti...    38  0.024
Contig-U12108-1 (Contig-U12108-1Q) /CSM_Contig/Conti...    38  0.024


Homology Contig-U11415-1 vs DNA

<more DNA info> 
Sequences producing significant alignments:                  (bits) Value  N


(BJ335372) Dictyostelium discoideum cDNA clone:dda49o21, 5' ...   833   0.0    1
(BJ353375) Dictyostelium discoideum cDNA clone:dda49o21, 3' ...   779   0.0    1
(BJ343496) Dictyostelium discoideum cDNA clone:dda16c11, 3' ...   504   e-138  1
(BJ326377) Dictyostelium discoideum cDNA clone:dda16c11, 5' ...   418   e-129  2
(BJ427016) Dictyostelium discoideum cDNA clone:ddv61b05, 5' ...    44   0.058  2
(BJ370193) Dictyostelium discoideum cDNA clone:ddc53b10, 5' ...    40   0.21   2
(CJ468934) Macaca fascicularis mRNA, clone: QnpA-18893, 5' e...    50   0.24   1
(CJ440543) Macaca fascicularis mRNA, clone: QccE-17865, 5' e...    50   0.24   1
(CJ435606) Macaca fascicularis mRNA, clone: QccE-12658, 5' e...    50   0.24   1
(BJ326279) Dictyostelium discoideum cDNA clone:dda15l03, 5' ...    50   0.24   1


Homology Contig-U11415-1 vs Protein

<more Protein info> 
Sequences producing significant alignments:                      (bits) Value


AK075458_1(AK075458|pid:none) Homo sapiens cDNA PSEC0151 fis, cl...    36   2.7
(Q9BTY2) RecName: Full=Plasma alpha-L-fucosidase;          EC=3....    36   2.7
AL844509_427(AL844509|pid:none) Plasmodium falciparum 3D7 chromo...    36   3.6
(Q54HT7) RecName: Full=Arrestin domain-containing protein F;           35   8.0


<Clone: Contig-U11415-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>

Dictyostelium discoideum cDNA Project Home