Homology Contig-U11415-1 vs DNA
Query= Contig-U11415-1 (Contig-U11415-1Q) /CSM_Contig/Contig-U11415-1Q.Seq.d
(1342 letters)
Database: ddbj_A
108,600,042 sequences; 106,710,029,556 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ335372) Dictyostelium discoideum cDNA clone:dda49o21, 5' ... 833 0.0 1
(BJ353375) Dictyostelium discoideum cDNA clone:dda49o21, 3' ... 779 0.0 1
(BJ343496) Dictyostelium discoideum cDNA clone:dda16c11, 3' ... 504 e-138 1
(BJ326377) Dictyostelium discoideum cDNA clone:dda16c11, 5' ... 418 e-129 2
(BJ427016) Dictyostelium discoideum cDNA clone:ddv61b05, 5' ... 44 0.058 2
(BJ370193) Dictyostelium discoideum cDNA clone:ddc53b10, 5' ... 40 0.21 2
(CJ468934) Macaca fascicularis mRNA, clone: QnpA-18893, 5' e... 50 0.24 1
(CJ440543) Macaca fascicularis mRNA, clone: QccE-17865, 5' e... 50 0.24 1
(CJ435606) Macaca fascicularis mRNA, clone: QccE-12658, 5' e... 50 0.24 1
(BJ326279) Dictyostelium discoideum cDNA clone:dda15l03, 5' ... 50 0.24 1
(CJ435920) Macaca fascicularis mRNA, clone: QccE-12987, 5' e... 46 0.29 2
(EK159045) 1095458018845 Global-Ocean-Sampling_GS-31-01-01-1... 48 0.32 2
(BJ388395) Dictyostelium discoideum cDNA clone:dds9h08, 5' e... 38 0.69 2
(BJ327376) Dictyostelium discoideum cDNA clone:dda20p01, 5' ... 46 0.81 2
(BJ396645) Dictyostelium discoideum cDNA clone:dds43n09, 5' ... 42 0.85 2
(BX072361) Single read from an extremity of a full-length cD... 48 0.93 1
(ER814024) POTN740TR Solanum tuberosum RHPOTKEY BAC ends Sol... 48 0.93 1
(EK180750) 1095458120724 Global-Ocean-Sampling_GS-31-01-01-1... 48 0.93 1
(EJ853708) 1093017906659 Global-Ocean-Sampling_GS-30-02-01-1... 48 0.93 1
(CV946111) PV009B8 zoospores, purified Phytophthora infestan... 48 0.93 1
(CJ481489) Macaca fascicularis mRNA, clone: QtrA-17174, 5' e... 48 0.93 1
(CJ468454) Macaca fascicularis mRNA, clone: QnpA-18316, 5' e... 48 0.93 1
(CJ459349) Macaca fascicularis mRNA, clone: QmoA-11531, 5' e... 48 0.93 1
(CJ449985) Macaca fascicularis mRNA, clone: QflA-15525, 5' e... 48 0.93 1
(BJ427105) Dictyostelium discoideum cDNA clone:ddv61e12, 5' ... 48 0.93 1
(BJ414126) Dictyostelium discoideum cDNA clone:ddv18l01, 5' ... 48 0.93 1
(BJ397045) Dictyostelium discoideum cDNA clone:dds44i22, 5' ... 48 0.93 1
(BJ387721) Dictyostelium discoideum cDNA clone:dds4p10, 5' e... 48 0.93 1
(BJ331950) Dictyostelium discoideum cDNA clone:dda37m14, 5' ... 48 0.93 1
(CJ465009) Macaca fascicularis mRNA, clone: QnpA-13959, 5' e... 46 1.0 2
(CJ482899) Macaca fascicularis mRNA, clone: QtsA-10309, 5' e... 46 1.0 2
(AC168463) Strongylocentrotus purpuratus clone R3-35E15, WOR... 40 1.9 6
(BJ392338) Dictyostelium discoideum cDNA clone:dds27e07, 5' ... 36 2.3 2
(BJ329050) Dictyostelium discoideum cDNA clone:dda30g17, 5' ... 42 2.7 2
(AM645461) Entamoeba moshkovskii FIC GSS, clone mosh026h09.q1k. 42 3.0 2
(AC019104) Homo sapiens chromosome 5 clone RP11-467A2, WORKI... 36 3.2 6
(BJ364474) Dictyostelium discoideum cDNA clone:ddc31h23, 5' ... 40 3.6 2
(AC125047) Mus musculus BAC clone RP23-354G14 from chromosom... 46 3.7 1
(EA012969) Sequence 26 from patent US 7129060. 46 3.7 1
(AC165428) Strongylocentrotus purpuratus BAC clone contig co... 46 3.7 1
(AC236805) Microcebus murinus clone CH257-442B20, WORKING DR... 46 3.7 1
(AC232953) Microcebus murinus clone CH257-133A5, WORKING DRA... 46 3.7 1
(AC201534) Strongylocentrotus purpuratus clone R3-3093I06, W... 46 3.7 1
(AC188334) Microcebus murinus clone CH257-532M6, WORKING DRA... 46 3.7 1
(AC178645) Strongylocentrotus purpuratus clone R3-11G01, WOR... 46 3.7 1
(AC168806) Strongylocentrotus purpuratus clone R3-13H13, WOR... 46 3.7 1
(EK517254) 1095515504191 Global-Ocean-Sampling_GS-32-01-01-1... 46 3.7 1
(EK501755) 1095505216189 Global-Ocean-Sampling_GS-32-01-01-1... 46 3.7 1
(CT503581) A BAC library has been constructed from cultivar ... 46 3.7 1
(CT306544) Sus scrofa genomic clone CH242-354P4, genomic sur... 46 3.7 1
(DT320768) SusFleck_BF_0017_0020_5_pCNS_K09 SusFleck Backfat... 46 3.7 1
(DB787291) Sus scrofa mRNA, clone:ADR010065E03, 5' end, expr... 46 3.7 1
(CJ492894) Macaca fascicularis mRNA, clone: QtsA-20890, 5' e... 46 3.7 1
(CJ484355) Macaca fascicularis mRNA, clone: QtsA-11890, 5' e... 46 3.7 1
(CJ484351) Macaca fascicularis mRNA, clone: QtsA-11886, 5' e... 46 3.7 1
(CJ476815) Macaca fascicularis mRNA, clone: QtrA-11343, 5' e... 46 3.7 1
(CJ475961) Macaca fascicularis mRNA, clone: QorA-16331, 5' e... 46 3.7 1
(CJ470707) Macaca fascicularis mRNA, clone: QorA-10261, 5' e... 46 3.7 1
(CJ469229) Macaca fascicularis mRNA, clone: QnpA-19730, 5' e... 46 3.7 1
(CJ468187) Macaca fascicularis mRNA, clone: QnpA-18012, 5' e... 46 3.7 1
(CJ467324) Macaca fascicularis mRNA, clone: QnpA-16807, 5' e... 46 3.7 1
(CJ463672) Macaca fascicularis mRNA, clone: QnpA-12086, 5' e... 46 3.7 1
(CJ458362) Macaca fascicularis mRNA, clone: QmoA-10337, 5' e... 46 3.7 1
(CJ452710) Macaca fascicularis mRNA, clone: QflA-18376, 5' e... 46 3.7 1
(CJ450381) Macaca fascicularis mRNA, clone: QflA-15940, 5' e... 46 3.7 1
(CJ447989) Macaca fascicularis mRNA, clone: QflA-13344, 5' e... 46 3.7 1
(CJ447550) Macaca fascicularis mRNA, clone: QflA-12885, 5' e... 46 3.7 1
(CJ445884) Macaca fascicularis mRNA, clone: QflA-11047, 5' e... 46 3.7 1
(CJ445534) Macaca fascicularis mRNA, clone: QflA-10679, 5' e... 46 3.7 1
(CJ442578) Macaca fascicularis mRNA, clone: QccE-20101, 5' e... 46 3.7 1
(CJ442033) Macaca fascicularis mRNA, clone: QccE-19530, 5' e... 46 3.7 1
(CJ441975) Macaca fascicularis mRNA, clone: QccE-19468, 5' e... 46 3.7 1
(CJ439012) Macaca fascicularis mRNA, clone: QccE-16259, 5' e... 46 3.7 1
(CJ435021) Macaca fascicularis mRNA, clone: QccE-12043, 5' e... 46 3.7 1
(CJ433561) Macaca fascicularis mRNA, clone: QccE-10518, 5' e... 46 3.7 1
(CI038355) Oryza sativa Japonica Group cDNA, clone: 009-M170... 46 3.7 1
(CI035236) Oryza sativa Japonica Group cDNA, clone: 009-M133... 46 3.7 1
(CI003483) Oryza sativa Japonica Group cDNA, clone: 003-M125... 46 3.7 1
(CB130392) K-EST0180289 L12JSHC0 Homo sapiens cDNA clone L12... 46 3.7 1
(BX520883) RZPD Mus musculus cDNA clone IMAGp998E194715 = IM... 46 3.7 1
(BM235237) K0415A11-3 NIA Mouse Mesenchymal Stem Cell cDNA L... 46 3.7 1
(BJ418575) Dictyostelium discoideum cDNA clone:ddv33c08, 5' ... 46 3.7 1
(BJ416799) Dictyostelium discoideum cDNA clone:ddv27h10, 5' ... 46 3.7 1
(BJ416340) Dictyostelium discoideum cDNA clone:ddv25i21, 5' ... 46 3.7 1
(BJ415810) Dictyostelium discoideum cDNA clone:ddv23g20, 5' ... 46 3.7 1
(BJ415251) Dictyostelium discoideum cDNA clone:ddv22a02, 5' ... 46 3.7 1
(BJ392493) Dictyostelium discoideum cDNA clone:dds27i19, 5' ... 46 3.7 1
(BJ392469) Dictyostelium discoideum cDNA clone:dds27c23, 5' ... 46 3.7 1
(BJ392153) Dictyostelium discoideum cDNA clone:dds26h17, 5' ... 46 3.7 1
(BJ389708) Dictyostelium discoideum cDNA clone:dds19d24, 5' ... 46 3.7 1
(BJ389633) Dictyostelium discoideum cDNA clone:dds19b15, 5' ... 46 3.7 1
(BJ387852) Dictyostelium discoideum cDNA clone:dds5n10, 5' e... 46 3.7 1
(BJ387486) Dictyostelium discoideum cDNA clone:dds2k21, 5' e... 46 3.7 1
(BJ363323) Dictyostelium discoideum cDNA clone:ddc26g05, 5' ... 46 3.7 1
(BJ363212) Dictyostelium discoideum cDNA clone:ddc25h14, 5' ... 46 3.7 1
(BJ363091) Dictyostelium discoideum cDNA clone:ddc25g04, 5' ... 46 3.7 1
(BJ363011) Dictyostelium discoideum cDNA clone:ddc24f16, 5' ... 46 3.7 1
(BJ362988) Dictyostelium discoideum cDNA clone:ddc24p09, 5' ... 46 3.7 1
(BJ337033) Dictyostelium discoideum cDNA clone:dda56c05, 5' ... 46 3.7 1
(BJ334699) Dictyostelium discoideum cDNA clone:dda47a14, 5' ... 46 3.7 1
(BJ333335) Dictyostelium discoideum cDNA clone:dda42g08, 5' ... 46 3.7 1
(BJ329087) Dictyostelium discoideum cDNA clone:dda30a23, 5' ... 46 3.7 1
(L04661) Rickettsia typhi crystalline surface layer protein ... 46 3.7 1
(EF433951) Rickettsia endosymbiont of Ixodes scapularis OmpB... 46 3.7 1
(EF380356) Rickettsia monacensis strain IrR/Munich outer mem... 46 3.7 1
(DQ113910) Rickettsia tamurae strain AT-1 OmpB (ompB) gene, ... 46 3.7 1
(AE017197) Rickettsia typhi str. Wilmington complete genome. 46 3.7 1
(AL590135) Human DNA sequence from clone RP11-307O1 on chrom... 38 3.8 3
(CJ460127) Macaca fascicularis mRNA, clone: QmoA-12466, 5' e... 38 3.9 2
(CJ461113) Macaca fascicularis mRNA, clone: QmoA-13976, 5' e... 36 4.0 2
(CJ480482) Macaca fascicularis mRNA, clone: QtrA-15983, 5' e... 44 4.1 2
(EJ446378) 1093015335303 Global-Ocean-Sampling_GS-28-01-01-1... 38 4.5 2
(BJ326603) Dictyostelium discoideum cDNA clone:dda17m03, 5' ... 36 5.4 3
(AY515252) Medicago truncatula clone mth2-50E03, *** SEQUENC... 38 6.0 6
(AC236993) Tupaia belangeri BAC clone CH275-52H12 from chrom... 32 7.3 2
(BJ387960) Dictyostelium discoideum cDNA clone:dds7k01, 5' e... 38 7.4 2
(AP006407) Lotus japonicus genomic DNA, chromosome 4, clone:... 38 8.9 3
(BJ387912) Dictyostelium discoideum cDNA clone:dds5c22, 5' e... 40 9.0 2
(EK091205) 1092962001859 Global-Ocean-Sampling_GS-31-01-01-1... 34 9.1 3
(CA196455) SCBFAD1089C06.g AD1 Saccharum officinarum cDNA cl... 34 9.3 2
(AM479822) Vitis vinifera contig VV78X031851.7, whole genome... 36 9.5 3
(BJ388514) Dictyostelium discoideum cDNA clone:dds9n22, 5' e... 40 9.5 2
>(BJ335372) Dictyostelium discoideum cDNA clone:dda49o21, 5' end,
single read.
Length = 626
Score = 833 bits (420), Expect = 0.0
Identities = 420/420 (100%)
Strand = Plus / Plus
Query: 510 tcacctgtaaagattacacaattattattatcagagaaagatagtgatgcactttcaagt 569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 tcacctgtaaagattacacaattattattatcagagaaagatagtgatgcactttcaagt 266
Query: 570 attttccaattgatttcaagattggttgaatcttcaatggcagttggaaatgtattttta 629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 attttccaattgatttcaagattggttgaatcttcaatggcagttggaaatgtattttta 326
Query: 630 aagattggaccattgatttcattagcatttcaatttgcagtatcacaagttgattcaaaa 689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 aagattggaccattgatttcattagcatttcaatttgcagtatcacaagttgattcaaaa 386
Query: 690 ttaaaatctagtgcattatcagtgattacatcatattctcaatatccaatttatgtagct 749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 ttaaaatctagtgcattatcagtgattacatcatattctcaatatccaatttatgtagct 446
Query: 750 gatatttggagattaataaatgaaaccaatctattcaatagtggtcttagtgcaattggt 809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gatatttggagattaataaatgaaaccaatctattcaatagtggtcttagtgcaattggt 506
Query: 810 gggctaaatgaattatctttcactcaacaatcattagagttgttattacaattgattcaa 869
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 gggctaaatgaattatctttcactcaacaatcattagagttgttattacaattgattcaa 566
Query: 870 caatcatcattcctattcgataagagtaatcattatcaagaatctttgaaactcaaatcc 929
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 caatcatcattcctattcgataagagtaatcattatcaagaatctttgaaactcaaatcc 626
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 108600042
Number of Hits to DB: 1,394,601,956
Number of extensions: 87641387
Number of successful extensions: 6928397
Number of sequences better than 10.0: 132
Length of query: 1342
Length of database: 106,710,029,556
Length adjustment: 24
Effective length of query: 1318
Effective length of database: 104,103,628,548
Effective search space: 137208582426264
Effective search space used: 137208582426264
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
Dictyostelium discoideum cDNA Project Home