Dictyostelium discoideum cDNA Contig-U11408-1

Assembled

Chromosomal Location of Contig-U11408-1

Sequence Contig-U11408-1

ATTTTCAAAA AAAAAATTCA TTTATTTTTT ATAATAAAAT AGAACACATA
ACAATATTTT TTTTTATTTG TAGTAATATT TGTTAATTCT AATATTATTT
TATATTGAAT TATTTTTTAT ATGTAAAATA ATTAAAATTT TTTATAATTA
TTATAACCTT AATTTATTTT TAAAATTATT TTTATTATTA TTATTTTTTA
TTTTTTATTT TTATTTTCAA AATTAATTTT TATTTTTTAT TTAATTGTTC
ACAAACACAT TTAACAACCT ATTAAAAAAA TTTCTAAATT TCTAAAAATT
ATAATATAAA AAATTTCTAA CTAACTAATA ATAAAAATAA TAATAATAGT
AGTGGTACCA TTTTAAAAAA ATTTATATTT ATTTATTTTA TTTCAAATAA
TTTTTAAAAT TTATCCCCTT TATTTAATTT AATTATTAAT TATTTTTAAT
ATTTATCGCT AATCTATTAC CAATTTTTTT TCTTTGTTAA ATTAATTTCG
AATTTTAATA CAGATAAAAT ACAAATTAAA AAAATAATAA AAAACACAAT
AGATTAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA
AAATTGGTTT CTACAAATAC ATTTTCGTTT TGTT------ ----GTGATG
GATTATTAGA AGTTTTAAAA GATAGTAAAA AAGATATTAT TCGTGGTATG
ATCTATTGTT TCAATAGTAG TAGTAGTTTC TTACAGAAAT TCGTCGATAT
GGATTTCTAT ATCAGTTTCA ATGGTTTACT TTGTGAACAA TCGGATAAAG
GTGACCAATT AAGAGATTTC ATTACTAAAG TACCATTGGA TAGAATTTTA
TTGGTATCTG ATTCACCAAA TAATACTCCA CAAAATATAC CAGATCAACA
TGTTCGTGAA TCAAGAAATG AACCTTCAAA TCTTCCATTT GTTTTAGATA
TTGCTGCAAC TTCTTTAAAT ATGTCTGTTA AAGATTTATC AAAACAAATT
AAAGAAAATT CTAAAAGATT TTATTCACTT TCTTTAGATT CAACAACAAC
AACAACAACA GAAAATAGTG AAGAAAATAG TGTAGAAAAT AGTGTAGAAA
AAACTGAAGA AAAGAATGAA GAAAAATCAA TTGATAAAAA AAAAGCATCA
AAAGGTAAAG GAAAGAATAA TAATAATAAT AATTTAGAAA CTACTACCAC
TACCACTACT ACTACCACTA CTAAATCATC AAAAGAAATT GAAAAACTTA
ATAAAAAATC AATTAAACAA CAACAAAAAG AATTAAATTT ATTAATGGAT
GAGAAATTAA TTCAGATGAT AATGATGATG ATGATGAAGA GAGTGATGAA
GAAGAAGAAG AAGAAGAAGA GAGTGATGAA GATGAAGAAT CAAAACCAAT
TAAAAAAATT AATAAAAATA TTTCAAAATT AACAAAGGAT CAACAAGAGA
ATATTCATTA TTCATGTAAA AAATGTAGAT CAAAATTATT TACACATGGT
GAGATCATTT CGCATGAAGA GAAATCAAAG GTATTGGATC ATAATTATAT
TAAACAAAAG AATAAGGAAT TGCAACAAGC TACTGGTAAC ATTGGTGAAG
GTATTTACAA TGGCAATAGT TATATAACTG CAACTCATTC CATCGGTTGT
AAATCATTCT TTTTACCACC TTTGGATTGG ATGAAAGTTG ATATCACCAA
AAACAATTTC AAAGTGGTTT GTCCAAATTG TGACAATAAA TTAGGTTCCT
ACAGTCATAC AGGTGAGAAA TGTTCATGTA GTTCAATGAT TGGTGAATCT
TGTAGAATTT TAAAAACAAG AGTCGATACT GTCTATTTAG GTGATAATGG
TAAATTATTG GATTTATCAT TATTAAATTT AGAAGATGAT GAAGATGATG
AAGATGATGA AGATGGTTTA GGAAAATTAA AGAAAAAGAA ATCTGCTAAA
AAGAATGTTA AAAAAGATAA TCGTAATAAT CTTTCAAACT ATAGAAATAA
AATTCAATCT GCTAAAAAAC CAATAACAAA AGAACAAGAT AATAATAATA
ATAATA

Translated Amino Acid Sequence Contig-U11408-1

fskkkfiyfl**nrthnniffyl**yllililfyielffickiikifynyynlnlflklf
llllffifyfyfqn*flffi*lftntfnnllkkflnf*kl*ykkfltn***k*****wyh
fkkiyiylfyfk*flkfipfi*fny*lflifianllpifflc*infef*yr*ntn*KNNK
KHNRLKKKKKKKKKKKKKKKNWFLQIHFRFV---

---DGLLEVLKDSKKDIIRGMIYCFNSSSSFLQKFVDMDFYISFNGLLCEQSDKGDQLRD
FITKVPLDRILLVSDSPNNTPQNIPDQHVRESRNEPSNLPFVLDIAATSLNMSVKDLSKQ
IKENSKRFYSLSLDSTTTTTTENSEENSVENSVEKTEEKNEEKSIDKKKASKGKGKNNNN
NNLETTTTTTTTTTTKSSKEIEKLNKKSIKQQQKELNLLMDEKLIQMIMMMMMKRVMKKK
KKKKRVMKMKNQNQLKKLIKIFQN*qrinkrifiihvknvdqnylhmvrsfrmkrnqryw
iiiilnkrirncnkllvtlvkvftmaivi*lqlipsvvnhsfyhlwig*klispktiskw
fvqivtin*vptviqvrnvhvvq*lvnlvef*kqesilsi*vimvnywiyhy*i*kmmkm
mkmmkmv*en*rkrnllkrmlkkiiviifqtieikfnllknq*qknkiiiiii

Homology Contig-U11408-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U11408-1 (Contig-U11408-1Q) /CSM_Contig/Conti...   936  0.0
Contig-U12889-1 (Contig-U12889-1Q) /CSM_Contig/Conti...    40  0.009
Contig-U06807-1 (Contig-U06807-1Q) /CSM_Contig/Conti...    38  0.037
Contig-U04902-1 (Contig-U04902-1Q) /CSM_Contig/Conti...    38  0.037
Contig-U12194-1 (Contig-U12194-1Q) /CSM_Contig/Conti...    36  0.15
Contig-U09769-1 (Contig-U09769-1Q) /CSM_Contig/Conti...    36  0.15
Contig-U05167-1 (Contig-U05167-1Q) /CSM_Contig/Conti...    36  0.15
Contig-U04705-1 (Contig-U04705-1Q) /CSM_Contig/Conti...    36  0.15
Contig-U13891-1 (Contig-U13891-1Q) /CSM_Contig/Conti...    34  0.58
Contig-U12843-1 (Contig-U12843-1Q) /CSM_Contig/Conti...    34  0.58

Homology Contig-U11408-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ433705) Dictyostelium discoideum cDNA clone:ddv22o15, 3' ...   880   0.0    2
(BJ407213) Dictyostelium discoideum cDNA clone:dds37h20, 3' ...   880   0.0    2
(BJ353139) Dictyostelium discoideum cDNA clone:dda49i03, 3' ...   837   0.0    1
(BJ401478) Dictyostelium discoideum cDNA clone:dds23k08, 3' ...   783   0.0    1
(BJ414066) Dictyostelium discoideum cDNA clone:ddv17o24, 5' ...   710   0.0    1
(AU265270) Dictyostelium discoideum vegetative cDNA clone:VS...   561   e-155  1
(BJ432188) Dictyostelium discoideum cDNA clone:ddv17o24, 3' ...   367   1e-98  2
(BJ377222) Dictyostelium discoideum cDNA clone:ddc22f01, 3' ...   363   2e-95  1
(GR572001) CBTG425.b1 CBTG Dictyostelium purpureum 12 hr veg...    58   9e-23  5
(BJ371188) Dictyostelium discoideum cDNA clone:ddc57c06, 5' ...    64   4e-11  2

Homology Contig-U11408-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


AP008955_976(AP008955|pid:none) Brevibacillus brevis NBRC 100599...    84   3e-14
CP001229_1568(CP001229|pid:none) Sulfurihydrogenibium azorense A...    77   2e-12
AM181176_1648(AM181176|pid:none) Pseudomonas fluorescens SBW25 c...    74   2e-11
CP001230_388(CP001230|pid:none) Persephonella marina EX-H1, comp...    72   8e-11
CP000444_395(CP000444|pid:none) Shewanella sp. MR-7, complete ge...    72   8e-11
(Q9D0T2) RecName: Full=Dual specificity protein phosphatase 12; ...    71   1e-10
CP000961_516(CP000961|pid:none) Shewanella woodyi ATCC 51908, co...    71   2e-10
AE014299_4091(AE014299|pid:none) Shewanella oneidensis MR-1, com...    70   4e-10
CP000083_153(CP000083|pid:none) Colwellia psychrerythraea 34H, c...    70   4e-10
(Q9JIM4) RecName: Full=Dual specificity protein phosphatase 12; ...    70   4e-10