Dictyostelium discoideum cDNA Contig-U11407-1

Assembled

Chromosomal Location of Contig-U11407-1

NO HIT FOUND.

Sequence Contig-U11407-1

ATTTTATCAT CTACAAGTTT TTCAAGCAAT AAAACACATT CAATAGCAGT
TTGAAAATGA TCTTAAAGAT TCTGAAATTT GGGAAACTAA TGTACTTTAA
TATTATTTCA TTAAATTTGC CAAAATTTAA TAATGTTAAA GGATTTGTTC
AAATCGAGTT AATAGAAGGA TATAATCAAA CTTCGTGGTC TAATATTAAA
GAGATTGGGA ATGTAACAAA ATATCTATAT TAGAACAAAT GATTTAACAG
AATTTCCAAA TGATCATCTA TCAAATATCA GGTCTGATTC GATAGAGAAA
ATAAATTTTG AAGTTCCGTT TAAATCTGTT AAAAAAATGT GCGATTTATC
ATCAATAGGT AAATCAATTC AAATTATTTC CTTTTCAAAA TGTGGTAGAG
ATTTTTCATT TAATGGTTTA ATGCCAATAA TTTTACCAAA TAACCAAGAT
TTTCAATATT TTTTTTTAAT TGGTGGCTAT ATTAAGAATT TTGATATTTT
GCAATATAAA AGTGCTGAAT ATATTACATT AAGCAATAAT TTGATGTCTG
GTACCTTACC TTCAATTAAT AGTTTTAAAT TCGGTAAATT AAAATATATT
GATATTGGTT TTAATTTAAT AACAGGTGAA TTGGATGACT CATATTGTGA
ATTTGATATT ATTG------ ----TGGTAA ATGTAAATGT GATTCGACTC
ATCAAGGTGA TGATTGTTCA TTACCATATA TTGAATGTCC AATTAATTGT
ACCAATTTAA GTGTATGTAA TAATGTAACT GGTGAATGTT CATGTCCATC
ATTCTTAATT TGGAGCGGTA TTGATTGCTC ATTTCCATTA CATACAATAT
CTGCAGTTTC ACCAAGTGAT ATCAATGGTG GTAGTGCTTC AATTTATGGT
TGGTTTGGTA ATATTCATAA TGACCCACAA GTTTTCATTG GTACTAAACA
ATGTATACCA ATTTATAATA TATCTGAAAG TGAAATTATT TGTAAAGCAC
CACCAGGTAC AGGTTTAAAA TCAGTAAGTG TAATTCAAAA TTCAATCAAT
GTGACATCAA AAGATATTTA TCAATATTAT TCAAATGATA AACAATGTCC
AAATCATTGT ACATCGACAT CAAATGGCAT TTGTAATACA ACAACTGGAT
ATTGTAATTG TATTGGAAGA TGGAGCGGTT ATGATTGTAG TTTATATTCT
AATCCAAGTG GCGGTGGCGA TAATAGTGGT GGATTACCAG GATCTAATAC
AACAATAGAT GGTAATACTG GTAATACAAA TATTACACTG GTAATACAAA
TATTACAAAT CAACACACAA ATTATCAAAT TTTAATTACA AAATTAATAG
AGATAGATTT CAATGGTAAT CAAATCAATG AATATCTATT ATTAAATAAA
TGGTCAATAA TTTCGAATAT TAGTAAAACA GTTTACACAT TCAATCAATC
AATTCAAAAT GATAAATGTA ATATCACATA TACAATTGAA GAAGTTAATA
AAGATAGAGA TGTATCATTT GCGGGTATTA ATTTTAAATT AACAAGTGGA
TCAGTTAAAA TGACAGTATC AATTGAAAAT TATCAATATT CAAGTAATTT
AAATACATTA CAATTACAAA TGAAATCAAG TGTAAATGAA ATTCAAATAA
ATCATGAAAT GAATGATTGT AACAATGATC AAATTGAAAT CAATAATACA
CCAAATCAAT ATAATTCATT AAATTATATA ACAATTAAAA AAGATGCAAA
AGTTTTAAAT GGTAGATTTA TAGACAGAAT CGAAAGTGAT GGTATATCAA
CATTTATGCA AACTGTATTA GTATCAAAAT CAAATGACTC AATTACAGTT
GGTATGAATT TACCTCATTG TACAAAGAAA TGTTTATTAG ATCCTGATTT
CTCTGTATTG GTTAGTCCTG AATTCGTTGA TGAATGTGAT AATGATCGAA
AATCCTGGTT TTTACCAGTT GTTATAGTGG TTCCTATTGT TTTTTTAATT
TTAATAATTA TTTTTGTAGT TATTACTATA AAAAAAAGAT ATGTTGAGAT
GTATTTATTT AAATCAAAAA TAAAACAATT GGCAAACTTA AAAAATATTA
AAATAAATAA AAAAACAGAA TTATAATAAA TAAAAATTNA TTAACAGGAT
TCATTTAAAA AATTTTTA

Translated Amino Acid Sequence Contig-U11407-1

ilsstsfssnkthsiav*k*s*rf*nlgn*ctlilfh*icqnlimlkdlfkss**kdiik
lrglilkrlgm*QNIYIRTNDLTEFPNDHLSNIRSDSIEKINFEVPFKSVKKMCDLSSIG
KSIQIISFSKCGRDFSFNGLMPIILPNNQDFQYFFLIGGYIKNFDILQYKSAEYITLSNN
LMSGTLPSINSFKFGKLKYIDIGFNLITGELDDSYCEFDII---

---GKCKCDSTHQGDDCSLPYIECPINCTNLSVCNNVTGECSCPSFLIWSGIDCSFPLHT
ISAVSPSDINGGSASIYGWFGNIHNDPQVFIGTKQCIPIYNISESEIICKAPPGTGLKSV
SVIQNSINVTSKDIYQYYSNDKQCPNHCTSTSNGICNTTTGYCNCIGRWSGYDCSLYSNP
SGGGDNSGGLPGSNTTIDGNTGNTNITLVIQILQINTQIIKF*lqn**r*ismviksmni
yy*ingq*frilvkqfthsinqfkminvishiqlkklikiemyhlrvliln*qvdqlk*q
yqlkiiniqvi*ihynyk*nqv*mkfk*imk*mivtmiklksiihqiniih*ii*qlkkm
qkf*mvdl*teskvmvyqhlckly*yqnqmtqlqlv*iylivqrnvy*ilislywlvlns
lmnvimienpgfyqll*wfllff*f**lfl*lll*kkdmlrciylnqk*nnwqt*kilk*
ikkqnynk*kxinrihlknf

Homology Contig-U11407-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U11407-1 (Contig-U11407-1Q) /CSM_Contig/Conti...  3856  0.0
Contig-U14807-1 (Contig-U14807-1Q) /CSM_Contig/Conti...   753  0.0
Contig-U12416-1 (Contig-U12416-1Q) /CSM_Contig/Conti...    60  1e-08
Contig-U10835-1 (Contig-U10835-1Q) /CSM_Contig/Conti...    58  4e-08
Contig-U12490-1 (Contig-U12490-1Q) /CSM_Contig/Conti...    44  6e-04
Contig-U12072-1 (Contig-U12072-1Q) /CSM_Contig/Conti...    42  0.003
Contig-U14850-1 (Contig-U14850-1Q) /CSM_Contig/Conti...    40  0.010
Contig-U12323-1 (Contig-U12323-1Q) /CSM_Contig/Conti...    40  0.010
Contig-U12032-1 (Contig-U12032-1Q) /CSM_Contig/Conti...    40  0.010
Contig-U11864-1 (Contig-U11864-1Q) /CSM_Contig/Conti...    40  0.010

Homology Contig-U11407-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ438610) Dictyostelium discoideum cDNA clone:ddv37o11, 3' ...  1396   0.0    2
(BJ335161) Dictyostelium discoideum cDNA clone:dda49m01, 5' ...   615   0.0    3
(BJ427486) Dictyostelium discoideum cDNA clone:ddv62g17, 5' ...   383   0.0    6
(BJ404658) Dictyostelium discoideum cDNA clone:dds29p04, 3' ...   563   0.0    3
(BJ446393) Dictyostelium discoideum cDNA clone:ddv62g17, 3' ...   511   0.0    4
(BJ392865) Dictyostelium discoideum cDNA clone:dds29p04, 5' ...   295   0.0    6
(BJ424855) Dictyostelium discoideum cDNA clone:ddv53f21, 5' ...   278   0.0    6
(BJ443697) Dictyostelium discoideum cDNA clone:ddv53f21, 3' ...   490   0.0    3
(BJ419861) Dictyostelium discoideum cDNA clone:ddv37o11, 5' ...   254   0.0    5
(BJ353154) Dictyostelium discoideum cDNA clone:dda49m01, 3' ...   402   e-163  4

Homology Contig-U11407-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


AC117081_43(AC117081|pid:none) Dictyostelium discoideum chromoso...   412   0.0
AC117081_39(AC117081|pid:none) Dictyostelium discoideum chromoso...   406   0.0
AC116920_20(AC116920|pid:none) Dictyostelium discoideum chromoso...   173   6e-86
AC116967_7(AC116967|pid:none) Dictyostelium discoideum chromosom...   188   8e-86
AC116920_25(AC116920|pid:none) Dictyostelium discoideum chromoso...   172   8e-86
AC116920_24(AC116920|pid:none) Dictyostelium discoideum chromoso...   174   2e-85
AC116967_8(AC116967|pid:none) Dictyostelium discoideum chromosom...   186   1e-84
AC117075_64(AC117075|pid:none) Dictyostelium discoideum chromoso...   206   2e-83
AC116960_61(AC116960|pid:none) Dictyostelium discoideum chromoso...   177   1e-75
AC116982_41(AC116982|pid:none) Dictyostelium discoideum chromoso...   181   3e-69