Homology Contig-U11395-1 vs Protein

Query= Contig-U11395-1 (Contig-U11395-1Q) /CSM_Contig/Contig-U11395-1Q.Seq.d
         (1267 letters)

Database: nrp_A
           3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q54Z20) RecName: Full=Putative calcium up-regulated protein J;        39   0.30
AF458173_1(AF458173|pid:none) Mus musculus clone B6F3MH130 immun...    38   0.88
CR380955_267(CR380955|pid:none) Candida glabrata strain CBS138 c...    37   1.1
AB121655_1(AB121655|pid:none) Mus musculus mRNA for immunoglobul...    37   1.5
AM293756_1(AM293756|pid:none) Rattus norvegicus partial mRNA for...    36   3.3
AF065378_1(AF065378|pid:none) Mus musculus clone W1GT422 immunog...    36   3.3
(P01755) RecName: Full=Ig heavy chain V region S43; Flags: Precu...    36   3.3
AF028665_1(AF028665|pid:none) Mus musculus clone 61GU0203 immuno...    36   3.3
U16687_1(U16687|pid:none) Mus musculus Ig heavy chain leader and...    36   3.3
AL844506_52(AL844506|pid:none) Plasmodium falciparum 3D7 chromos...    31   3.9
AY607099_1(AY607099|pid:none) Mus musculus clone 1H7 anti-TSHr i...    35   5.7
AE017263_355(AE017263|pid:none) Mesoplasma florum L1 complete ge...    35   5.7
CP000976_732(CP000976|pid:none) Borrelia duttonii Ly, complete g...    35   5.7
AB058083_1(AB058083|pid:none) Mus musculus V186.2-D-JH2-Calpha m...    35   7.4
AB121476_1(AB121476|pid:none) Mus musculus gene for immunoglobul...    35   7.4
CP000521_425(CP000521|pid:none) Acinetobacter baumannii ATCC 179...    35   7.4
AB058106_1(AB058106|pid:none) Mus musculus V186.2-D-JH2-Calpha m...    35   7.4
AB058068_1(AB058068|pid:none) Mus musculus V186.2-D-JH2-Calpha m...    35   7.4
CP000817_3626(CP000817|pid:none) Lysinibacillus sphaericus C3-41...    34   9.7
CP000102_209(CP000102|pid:none) Methanosphaera stadtmanae DSM 30...    34   9.7
AL031745_34(AL031745|pid:none) Plasmodium falciparum DNA from MA...    34   9.7
AL844501_43(AL844501|pid:none) Plasmodium falciparum strain 3D7,...    34   9.7

>(Q54Z20) RecName: Full=Putative calcium up-regulated protein J;
          Length = 655

 Score = 39.3 bits (90), Expect = 0.30
 Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
 Frame = +2

Query: 1010 NCEEFRKKIKLMLQHSVLKGHLSV-AQFLHDNKIGKQYLEELVNQNFADLISEDRLEIVE 1186
            N  + + K  + + ++++KG   + +Q+ + N     +  ELVN  + D IS+D  + ++
Sbjct: 199  NYTDEKLKAYIYISNNLIKGIDDIRSQYTNSNYSFNSFSNELVNMKYPDSISKDSFDEIK 258

Query: 1187 FLYQNNYISITDVDYIVNLFNN 1252
               Q+ +     VD I+NLFNN
Sbjct: 259  TQLQSEF---EQVDSIINLFNN 277

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 1,606,655,383
Number of extensions: 30384026
Number of successful extensions: 70201
Number of sequences better than 10.0: 22
Number of HSP's gapped: 70181
Number of HSP's successfully gapped: 24
Length of query: 422
Length of database: 1,040,966,779
Length adjustment: 131
Effective length of query: 291
Effective length of database: 621,205,444
Effective search space: 180770784204
Effective search space used: 180770784204
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)