<Clone: Contig-U11341-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>

Dictyostelium discoideum cDNA Contig-U11341-1

Dictyostelium discoideum cDNA Project Home

Assembled

Chromosomal Location of Contig-U11341-1

< more Chromosomal info >

Chromosome Number 4
Length 5430582
Start Poin 2,954,756
End Point 2,953,281
Strand MINUS

Sequence Contig-U11341-1

AAAAAAGTTA TTCTAACCAC TTTTATTTTT AATATTAAAT TTTTAGCTTC
ACAATAATAA AATAATAATA TAATAAAAAC ACTTTTTTTT ATATATATAT
ATATATTATT TTCCTTCTGC TAGTAATAGT TTTTTTTTTT TACAAATTAA
TACTAGNAAT AAATTTTTAA TACTAGATAA TAATAATACA ATACAAATAT
ATTTAAATTT TAGTTTATTA TAAAAATAGA ATTATTATAA AAAAAAAAAT
TAAAAATAAT AATAATAATA AAAATAATAA ANGAAAAATN TTTTTA----
------CAAG AGAAGAGAGC AAGTAGAGAT ATTAATAAAG AGATNGAAAG
AGAGATTGAA AAGAAGAGAT TATCACCAAG AGAAAGATTA AATTTATTTG
GTCTTTCTTC CTCATCTTCA TCAGTGAATT CAACATTAAC AAGATCTACA
GCAAATATTA TCTCTACAAT AGACGGTAGT GGAGGTAGTA ATCGTAATAG
TAAAAATTAT GGTAATGGCT CATCCTCCTC CTCGGAATAG AAGATATAGT
AATACTATTA ATCAACAATT ACAAATGCAA TTACAACAAC TTCAAATCCA
ACAACAACAA TATCAACAAA CTCATCAATC TCAAATACCA TTGCAATATC
AACAACAACA ACAGCAACAA CAACAACAAA CCACTACAAC TACAACTACA
TCAAGTGGTA GTAATAGATT CTCTTCAAAT AGATATAAAC CAGTTGATCT
TACACAATCA TCTTCAAACT TTCGTTATTC ACGTGAAATT TATGATGATG
ATTATTATTC AAATAATAAT TTAATGATGT TTGGTAATGA GCAACCAAAT
CAAACACCAA TTTCTGTATC ATCTTCATCT GCATTCACAC GTCAAAGATC
TCAAAGTTGC TTTGAACCAG AGAATCTTGT ATTGCTACAA CAACAATATC
AACAATATCA ACAACAACAA CAACAACAAC AACAAATTCC ATTCCAAGCA
AATCCACAAA TATAGTAATG CTGTTATTGA ACAAAAATTG GATCAAATTA
GAGATACCAT TAATAATTTA CATAGAGATA ACCGAGTCTC TAGAGATTAT
ACTCATTATC TTAGAGAGGT TGAAGACTTA AGATCATCAC TTCAAAAAGA
AACCGTTGTC TCAAATGAAT TCATCAAAAA TATTGAATTG GAAGATAAAT
TACGTAGAGA GGAAGAAAAG AATCAAAGAT TAATTGAAGA GATTCATTTA
CTTGAAACCT ATTTCATCTT AAAAGAAAAA TCAAAAGCAA AACGTTTATC
AACCACTAAA GATCTTTTAA CTAGATCAAG ATCACCAACT TTACCAAGTT
CTATTAATAT GTCAACCTCA TCTTTAGGTA GTTCTTCAAG TTCTGCTTAT
AACAATAATA ATAATAATAA TAATGTACCA AAATAATTAA TTTTTAAAAA
ATTAAATAAA TTAAAAAATT AATAAATATA AAAAAAAA

Translated Amino Acid Sequence Contig-U11341-1

<All Frames> 
ksysnhfyf*y*ifsftiik**ynkntffyiyiyiiflllvivfffyklilxinf*y*ii
iiqykyi*ILVYYKNRIIIKKKIKNNNNNKNNKXKXFL---

---QEKRASRDINKEXEREIEKKRLSPRERLNLFGLSSSSSSVNSTLTRSTANIISTIDG
SGGSNRNSKNYGNGSSSSSE*ki**yy*stitnaitttsnptttistnssisntiaistt
ttattttnhynynyikw***ilfk*i*ts*sytiifklslft*nl***llfk**fndvw*
*atksntnfciificihtskiskll*tresciatttististtttttttnsipskstniv
mlllnknwikleipliiyieitesleiiliilerlkt*dhhfkkkplsqmnsskilnwki
nyverkkrikd*lkrfiylkpiss*kknqkqnvyqplkif*ldqdhqlyqvllicqphl*
vvlqvllitiiiiiimyqnn*flkn*in*kinkykkk


Homology Contig-U11341-1 vs CSM-Contig

<more CONTIG info> 
Sequences producing significant alignments:                        (bits)  Value


Contig-U11341-1 (Contig-U11341-1Q) /CSM_Contig/Conti...   819  0.0
Contig-U11524-1 (Contig-U11524-1Q) /CSM_Contig/Conti...    52  2e-06
Contig-U06394-1 (Contig-U06394-1Q) /CSM_Contig/Conti...    46  1e-04
Contig-U12828-1 (Contig-U12828-1Q) /CSM_Contig/Conti...    44  4e-04
Contig-U11301-1 (Contig-U11301-1Q) /CSM_Contig/Conti...    44  4e-04
Contig-U10632-1 (Contig-U10632-1Q) /CSM_Contig/Conti...    44  4e-04
Contig-U07005-1 (Contig-U07005-1Q) /CSM_Contig/Conti...    44  4e-04
Contig-U04860-1 (Contig-U04860-1Q) /CSM_Contig/Conti...    44  4e-04
Contig-U01121-1 (Contig-U01121-1Q) /CSM_Contig/Conti...    44  4e-04
Contig-U04478-1 (Contig-U04478-1Q) /CSM_Contig/Conti...    42  0.002


Homology Contig-U11341-1 vs DNA

<more DNA info> 
Sequences producing significant alignments:                  (bits) Value  N


(BJ446726) Dictyostelium discoideum cDNA clone:ddv63l13, 3' ...   819   0.0    2
(BJ408400) Dictyostelium discoideum cDNA clone:dds45o16, 3' ...   819   0.0    2
(BJ357570) Dictyostelium discoideum cDNA clone:dda63p22, 3' ...   819   0.0    2
(BJ353014) Dictyostelium discoideum cDNA clone:dda48n18, 3' ...   819   0.0    2
(BJ350994) Dictyostelium discoideum cDNA clone:dda41m17, 3' ...   819   0.0    2
(AF474341) Dictyostelium discoideum ABC transporter ABCC.9 (...   773   0.0    7
(BJ349246) Dictyostelium discoideum cDNA clone:dda35j19, 3' ...   773   0.0    3
(BJ403448) Dictyostelium discoideum cDNA clone:dds25m01, 3' ...   773   0.0    3
(BJ351235) Dictyostelium discoideum cDNA clone:dda42b18, 3' ...   773   0.0    3
(BJ404769) Dictyostelium discoideum cDNA clone:dds29g13, 3' ...   765   0.0    3


Homology Contig-U11341-1 vs Protein

<more Protein info> 
Sequences producing significant alignments:                      (bits) Value


AF081586_1(AF081586|pid:none) Dictyostelium discoideum developme...   186   1e-65
(A8Z5V5) RecName: Full=Chaperone protein dnaK; AltName: Full=Hea...    37   1.4


<Clone: Contig-U11341-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>

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