<Clone: Contig-U11274-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>

Dictyostelium discoideum cDNA Contig-U11274-1

Dictyostelium discoideum cDNA Project Home

Assembled

Chromosomal Location of Contig-U11274-1

< more Chromosomal info >

Chromosome Number 6
Length 3595308
Start Poin 785,587
End Point 786,528
Strand PLUS

Sequence Contig-U11274-1

GGCGATGAAG CTTTTCTTAC ACGATTCAAA TAATTATCAA GAACATGAAT
TAACTTTAGA AGTTCAACAA ACAAATATTA TNCAATTAAT ATTTTCAAAT
AGTTGTGTAA AAATGACAAC TATTCAAGAA TTATTTAGAT TAGATCCAAC
ATTGAATGAT AATGTTTCAT ATNATATTTA TTATGCTGTT AGAGCAGGTA
ATTTAGAGGT TAGTGAACAT TTTGTAAAGG ATTTATTTAA GAGGGGTGGA
TTTGGTTTTA ATAATTTACA TTCACAAGCA TTAAGTGTTG ATGGTAATGA
AGAGTTTCTA CCATTTAAAT CGGTATCGGT TACAAAGAAA CCAAACTTTG
GTAATGTTAC ACCAATTCAT TTCGCAGCAA TCAATCCAAA AGGAAAATAT
TTGAAACAAT TGTTGGATGT TTTATCAGAA CCTTCAAGAC CAGATCATAA
CTCATTCAGA CCACTTCATT ATGCTGCCGC TTGTACAGCA CCTGTCAATA
CAATTGTTAA CCAGTAAAGG TGTTGAATTA AATGATTTAA ATTCATTGGG
TATGACACCA TTGATGATCG CATCTCAATT GGGCAGAGTT CAAAATATTA
AAGCATTGGT AAAAGCTTCA AAAGAAAGAC AAATTGTAAA CTTTGTTAAA
TTTAAAAATA AGAAATTACA AGATGCTCTT CATTTCGCCG CTGAGGCAGG
TCAATTGGGT TCAATTCGTA CTCTTTTAGA GGAGGGTGCT GATATTGATG
TCTTTGAAAA AGGTACCAAA TACACCGCAT TAATGAAAGC TTCAATTATG
GGTCATTTCG ATGCAGTAAA GATTTTGGTT GAAGAAGGTA AAGCTGATGT
TGAAAAGAAG GATAAATTCA AGAGAACCGC TTTAGTATTG GCTGCCATCA
ATGGTCATAT T--------- ---------- -CTAATAATA AAAATCATAA
TAANGANAAT GATAATAATA AAATATACTA TATATANAAT GATATCATAA
AATATTATAT AACAGCATGT AAATAAATAA AACCTCATA

Translated Amino Acid Sequence Contig-U11274-1

<All Frames> 
r*sfsytiqiiiknmn*l*kfnkqilxn*yfqivv*k*qlfknyld*iqh*mimfhxifi
mlleqvi*rlvnil*riylrgvdlvliiyihkh*vlmvmksfyhlnryrlqrnqtlvmlh
qfisqqsiqkeni*NNCWMFYQNLQDQIITHSDHFIMLPLVQHLSIQLLTSKGVELNDLN
SLGMTPLMIASQLGRVQNIKALVKASKERQIVNFVKFKNKKLQDALHFAAEAGQLGSIRT
LLEEGADIDVFEKGTKYTALMKASIMGHFDAVKILVEEGKADVEKKDKFKRTALVLAAIN
GHI---

---XXXXNNKNHNXXNDNNKIYYIXNDIIKYYITACK*ikph


Homology Contig-U11274-1 vs CSM-Contig

<more CONTIG info> 
Sequences producing significant alignments:                        (bits)  Value


Contig-U11274-1 (Contig-U11274-1Q) /CSM_Contig/Conti...  1794  0.0
Contig-U02735-1 (Contig-U02735-1Q) /CSM_Contig/Conti...    42  0.001
Contig-U11292-1 (Contig-U11292-1Q) /CSM_Contig/Conti...    40  0.005
Contig-U13300-1 (Contig-U13300-1Q) /CSM_Contig/Conti...    38  0.019
Contig-U12384-1 (Contig-U12384-1Q) /CSM_Contig/Conti...    38  0.019
Contig-U14691-1 (Contig-U14691-1Q) /CSM_Contig/Conti...    36  0.073
Contig-U13141-1 (Contig-U13141-1Q) /CSM_Contig/Conti...    36  0.073
Contig-U12541-1 (Contig-U12541-1Q) /CSM_Contig/Conti...    36  0.073
Contig-U12411-1 (Contig-U12411-1Q) /CSM_Contig/Conti...    36  0.073
Contig-U09658-1 (Contig-U09658-1Q) /CSM_Contig/Conti...    32  1.1


Homology Contig-U11274-1 vs DNA

<more DNA info> 
Sequences producing significant alignments:                  (bits) Value  N


(AJ534950) Dictyostelium discoideum mRNA for NAD(+) ADP-ribo...   955   0.0    3
(BJ332104) Dictyostelium discoideum cDNA clone:dda38a05, 5' ...   815   0.0    2
(BJ403406) Dictyostelium discoideum cDNA clone:dds25d04, 3' ...   959   0.0    1
(GR568003) CBTF3554.g1 CBTF Dictyostelium purpureum 12 hr ve...    84   5e-49  7
(EK134031) 1093011489168 Global-Ocean-Sampling_GS-31-01-01-1...    38   0.14   2
(EK120977) 1092963370416 Global-Ocean-Sampling_GS-31-01-01-1...    38   0.14   2
(BP185963) Dugesia japonica cDNA, clone: 02481_HH, expressed...    50   0.18   1
(AC005164) Homo sapiens BAC clone CTB-135C18 from 7, complet...    48   0.35   3
(AC024947) Homo sapiens chromosome 01 clone RP11-200I10, com...    48   0.56   3
(BX511308) Zebrafish DNA sequence from clone DKEYP-118E10 in...    48   0.72   1


Homology Contig-U11274-1 vs Protein

<more Protein info> 
Sequences producing significant alignments:                      (bits) Value


AJ534950_1(AJ534950|pid:none) Dictyostelium discoideum mRNA for ...   328   e-161
AM270052_1(AM270052|pid:none) Aspergillus niger contig An03c0110...    75   3e-12
AM999887_687(AM999887|pid:none) Wolbachia endosymbiont of Culex ...    59   4e-12
(Q9TXQ1) RecName: Full=Poly(ADP-ribose) polymerase pme-5;       ...    52   5e-12
D88948(D88948)protein ZK1005.1 [imported] - Caenorhabditis elegans     52   5e-12
CP001391_569(CP001391|pid:none) Wolbachia sp. wRi, complete geno...    59   2e-11
CP001102_1320(CP001102|pid:none) Candidatus Amoebophilus asiatic...    71   4e-11
AF487541_1(AF487541|pid:none) Danio rerio protein kinase PKK (pk...    60   4e-11
AE017196_130(AE017196|pid:none) Wolbachia endosymbiont of Drosop...    63   1e-10
(Q5F478) RecName: Full=Serine/threonine-protein phosphatase 6 re...    58   2e-10


<Clone: Contig-U11274-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>

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