Homology Contig-U11274-1 vs DNA
Query= Contig-U11274-1 (Contig-U11274-1Q) /CSM_Contig/Contig-U11274-1Q.Seq.d
(1039 letters)
Database: ddbj_A
108,600,042 sequences; 106,710,029,556 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(AJ534950) Dictyostelium discoideum mRNA for NAD(+) ADP-ribo... 955 0.0 3
(BJ332104) Dictyostelium discoideum cDNA clone:dda38a05, 5' ... 815 0.0 2
(BJ403406) Dictyostelium discoideum cDNA clone:dds25d04, 3' ... 959 0.0 1
(GR568003) CBTF3554.g1 CBTF Dictyostelium purpureum 12 hr ve... 84 5e-49 7
(EK134031) 1093011489168 Global-Ocean-Sampling_GS-31-01-01-1... 38 0.14 2
(EK120977) 1092963370416 Global-Ocean-Sampling_GS-31-01-01-1... 38 0.14 2
(BP185963) Dugesia japonica cDNA, clone: 02481_HH, expressed... 50 0.18 1
(AC005164) Homo sapiens BAC clone CTB-135C18 from 7, complet... 48 0.35 3
(AC024947) Homo sapiens chromosome 01 clone RP11-200I10, com... 48 0.56 3
(BX511308) Zebrafish DNA sequence from clone DKEYP-118E10 in... 48 0.72 1
(AC192732) Pan troglodytes BAC clone CH251-477J23 from chrom... 48 0.72 1
(AC188765) Pan troglodytes BAC clone CH251-66L22 from chromo... 48 0.72 1
(GC697945) Sequence 13190 from patent US 6812339. 48 0.72 1
(AE014185) Plasmodium falciparum 3D7 chromosome 10, complete... 48 0.72 1
(AC004958) Homo sapiens clone DJ1096F22, *** SEQUENCING IN P... 48 0.72 1
(BU496402) PfESToac07f07.y1 Plasmodium falciparum 3D7 asexua... 48 0.72 1
(BF817919) MR2-CI0127-141200-014-b04 CI0127 Homo sapiens cDN... 48 0.72 1
(AM999887) Wolbachia endosymbiont of Culex quinquefasciatus ... 48 0.72 1
(CF229194) PtaXM0022D5D0507 Poplar cDNA library from mature ... 40 1.2 2
(X52459) M.arginini gene for arginine deiminase. 42 1.7 2
(BW536339) Ciona savignyi cDNA, clone:csma090h12, 5'end, sin... 42 1.8 2
(GD221501) G1045P352RI11.T1 Aplysia californica Pooled Norma... 44 2.3 2
(GD239790) G1045P361RH18.T1 Aplysia californica Pooled Norma... 44 2.4 2
(EJ746806) 1092963002442 Global-Ocean-Sampling_GS-30-02-01-1... 38 2.6 2
(FF060991) G1045P39RB18.T0 Aplysia californica Pooled Normal... 44 2.7 2
(CU633538) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 2.8 1
(ER622122) 1093017444459 Global-Ocean-Sampling_GS-36-01-01-2... 46 2.8 1
(ER582901) 1093015850584 Global-Ocean-Sampling_GS-36-01-01-2... 46 2.8 1
(ER395525) 1095344009476 Global-Ocean-Sampling_GS-34-01-01-1... 46 2.8 1
(EK342631) 1095467068104 Global-Ocean-Sampling_GS-31-01-01-1... 46 2.8 1
(EK233065) 1095460188324 Global-Ocean-Sampling_GS-31-01-01-1... 46 2.8 1
(DU913110) 329802 Tomato EcoRI BAC Library Solanum lycopersi... 46 2.8 1
(DW544559) EST_ssal_rgb2_8978 rgb2 Salmo salar cDNA clone ss... 46 2.8 1
(CA054428) ssalrgb517275 mixed_tissue Salmo salar cDNA, mRNA... 46 2.8 1
(FK930415) EST_lsal_evj_934087 lsalevj mixed_tissue_mixed_st... 46 2.8 1
(ES526812) BIG_AF_34632 Brine Shrimp embryos, 15 hours after... 46 2.8 1
(CP001678) Hirschia baltica ATCC 49814, complete genome. 46 2.8 1
(BB200746) Mus musculus 0 day neonate thymus cDNA, RIKEN ful... 38 3.1 2
(AC179972) Strongylocentrotus purpuratus clone R3-20B21, WOR... 38 3.5 5
(AC223518) Bos taurus clone CH240-467M18, WORKING DRAFT SEQU... 44 3.9 4
(EJ701229) 1092956037238 Global-Ocean-Sampling_GS-30-02-01-1... 36 4.4 3
(CU301536) Equus caballus GSS, BAC clone CH241-437B2, T7 end... 34 4.8 2
(AC005244) Homo sapiens chromosome 17, clone hRPK.471_L_13, ... 36 5.3 5
(AB010698) Arabidopsis thaliana genomic DNA, chromosome 5, P... 32 5.6 2
(AE017263) Mesoplasma florum L1 complete genome. 32 5.6 14
(AM459476) Vitis vinifera, whole genome shotgun sequence, co... 32 5.8 2
(CU179920) Medicago truncatula chromosome 5 clone mth4-25c2,... 36 6.1 8
(FP236272) Zebrafish DNA sequence from clone ZFOS-1294A3 in ... 44 6.5 3
(AC201639) Strongylocentrotus purpuratus clone R3-3093C9, WO... 38 6.9 5
(EC823386) SME00010177 esmbsro2 Sawyeria marylandensis cDNA,... 32 7.2 2
(CU245787) Equus caballus GSS, BAC clone CH241-392C21, T7 en... 34 7.5 2
(AC190419) Trichinella spiralis BAC clone TS195-5H12 from ch... 38 9.1 5
(AC018456) Homo sapiens 3 BAC RP11-172G5 (Roswell Park Cance... 32 9.5 7
(EJ716582) 1092959422626 Global-Ocean-Sampling_GS-30-02-01-1... 42 9.6 2
(CR072881) Forward strand read from insert in 5'HPRT inserti... 42 9.7 2
(AC165078) Mus musculus BAC clone RP24-287O1 from chromosome... 32 9.9 6
>(AJ534950) Dictyostelium discoideum mRNA for NAD(+)
ADP-ribosyltransferase-3 (adprt-3 gene).
Length = 7649
Score = 955 bits (482), Expect(3) = 0.0
Identities = 486/488 (99%)
Strand = Plus / Plus
Query: 13 tttcttacacgattcaaataattatcaagaacatgaattaactttagaagttcaacaaac 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1653 tttcttacacgattcaaataattatcaagaacatgaattaactttagaagttcaacaaac 1712
Query: 73 aaatattatncaattaatattttcaaatagttgtgtaaaaatgacaactattcaagaatt 132
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1713 aaatattatacaattaatattttcaaatagttgtgtaaaaatgacaactattcaagaatt 1772
Query: 133 atttagattagatccaacattgaatgataatgtttcatatnatatttattatgctgttag 192
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1773 atttagattagatccaacattgaatgataatgtttcatataatatttattatgctgttag 1832
Query: 193 agcaggtaatttagaggttagtgaacattttgtaaaggatttatttaagaggggtggatt 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1833 agcaggtaatttagaggttagtgaacattttgtaaaggatttatttaagaggggtggatt 1892
Query: 253 tggttttaataatttacattcacaagcattaagtgttgatggtaatgaagagtttctacc 312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1893 tggttttaataatttacattcacaagcattaagtgttgatggtaatgaagagtttctacc 1952
Query: 313 atttaaatcggtatcggttacaaagaaaccaaactttggtaatgttacaccaattcattt 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1953 atttaaatcggtatcggttacaaagaaaccaaactttggtaatgttacaccaattcattt 2012
Query: 373 cgcagcaatcaatccaaaaggaaaatatttgaaacaattgttggatgttttatcagaacc 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2013 cgcagcaatcaatccaaaaggaaaatatttgaaacaattgttggatgttttatcagaacc 2072
Query: 433 ttcaagaccagatcataactcattcagaccacttcattatgctgccgcttgtacagcacc 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2073 ttcaagaccagatcataactcattcagaccacttcattatgctgccgcttgtacagcacc 2132
Query: 493 tgtcaata 500
||||||||
Sbjct: 2133 tgtcaata 2140
Score = 815 bits (411), Expect(3) = 0.0
Identities = 411/411 (100%)
Strand = Plus / Plus
Query: 501 caattgttaaccagtaaaggtgttgaattaaatgatttaaattcattgggtatgacacca 560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2143 caattgttaaccagtaaaggtgttgaattaaatgatttaaattcattgggtatgacacca 2202
Query: 561 ttgatgatcgcatctcaattgggcagagttcaaaatattaaagcattggtaaaagcttca 620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2203 ttgatgatcgcatctcaattgggcagagttcaaaatattaaagcattggtaaaagcttca 2262
Query: 621 aaagaaagacaaattgtaaactttgttaaatttaaaaataagaaattacaagatgctctt 680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2263 aaagaaagacaaattgtaaactttgttaaatttaaaaataagaaattacaagatgctctt 2322
Query: 681 catttcgccgctgaggcaggtcaattgggttcaattcgtactcttttagaggagggtgct 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2323 catttcgccgctgaggcaggtcaattgggttcaattcgtactcttttagaggagggtgct 2382
Query: 741 gatattgatgtctttgaaaaaggtaccaaatacaccgcattaatgaaagcttcaattatg 800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2383 gatattgatgtctttgaaaaaggtaccaaatacaccgcattaatgaaagcttcaattatg 2442
Query: 801 ggtcatttcgatgcagtaaagattttggttgaagaaggtaaagctgatgttgaaaagaag 860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2443 ggtcatttcgatgcagtaaagattttggttgaagaaggtaaagctgatgttgaaaagaag 2502
Query: 861 gataaattcaagagaaccgctttagtattggctgccatcaatggtcatatt 911
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2503 gataaattcaagagaaccgctttagtattggctgccatcaatggtcatatt 2553
Score = 28.2 bits (14), Expect(3) = 0.0
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 1 ggcgatgaagcttt 14
||||||||||||||
Sbjct: 1642 ggcgatgaagcttt 1655
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 108600042
Number of Hits to DB: 1,292,379,773
Number of extensions: 81230662
Number of successful extensions: 6457027
Number of sequences better than 10.0: 56
Length of query: 1039
Length of database: 106,710,029,556
Length adjustment: 24
Effective length of query: 1015
Effective length of database: 104,103,628,548
Effective search space: 105665182976220
Effective search space used: 105665182976220
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
Dictyostelium discoideum cDNA Project Home