Dictyostelium discoideum cDNA Contig-U11273-1

Assembled

Chromosomal Location of Contig-U11273-1

Sequence Contig-U11273-1

AATTTTTTTT ATTTTCATTT CTTTTGTTTA ATGTATAATA ATAATAATAA
TAATAATAAC ACAAATACAC AAATTATTCG AAGAAATAAT AGTGAAGGTG
ATGACTATGT CCAATTTAAA TCTCAACAAA CTATACAAAG AGAACAAAGT
CAACAACAGC AGCAACAACA ACAACATCCG CAATTGGATG AGTTAATTGG
ATATAAACTA TATTTCCCAC CAAAAACAAA TAAAATTATT GAAAATGGTG
ATGAAAAATT AAATCAAGAG GCAATACTTG AAAAGAGACA TCAATTCATT
CAATTATCAC TTCCACTTTT TAGAGATGTT TGTAATGAGA CACTTTATGC
ACCAGATGAA AATAATACAA TACCATTAGA TTATCAATTA TTAAAAAATC
AAATTTATAG AGTAGAAGAT CAATTTGAAA TTAGATTAAG AGATGATTCA
GAAATGGTAA TTAATTGTTT AGGTGTTGTA ATTTATCAAG TATTATATGA
AAATGTTTCA GAGAGTCAAA GACCAAAGAA AAAGATAAAT ATAAGGATAT
TTCATTTTGA ACCATTATTA CAATTAAAGA AATTGAAAGC AAATCTTATT
GATAAATTTG TTTCATTAAA AGGTACTGTA ATTCGTGTTG GTAATGTTAA
ACCATTGGTA ACTCAAATGC AATTCATTTG TAATAAATGT TCAACACGTA
CACCAACACA ATATTTTACA G--------- -ATATCAAAA TGAGTGCACC
ACTACTCAGT AGATTCGATT TAATTTTCAT TTTAATGGAT AAACCAAACA
CTGAAAAGGA TCATATTATC TCTCATAATA TTTTAAATCT TCATTCAAAT
GGATCAGGCG TTAAAAAAAG AAAACCTCAA CCAATCATCA TCATCATCCT
CGGCAACAAC AAATTCATCT CAATATACTC ATGAAGAAGA TCATGATAAA
TCATTACCAT TAAAACAAAA ATTATTAATA ACTCATGGTC AAGAGATTAA
TTTAATTCCA ACAGTTATCC TTAGAAAATA TATAAGTTAT GCAAAGAAAT
ATGTTTCACC AAGACTTTCA GAAGAGGCAA TTAAAGTTAT ACAAAAATTT
TATTTAGAAC TTCGTTCAAA ATCTACAGGT TCTGATTCAA TGCCAGTTAC
AACTCGTCAA TTGGAATCAT TAATTCGTTT AGCAGAAGCA AGAGCAAAAC
TTGAATTACG TGAAACCGTT ACAGAACAAG ATGCAATCGA TATCGTAGAG
ATTATGAGAG ATTCACTTTT GGATACTTTT GAAGATGAAC ATGGTAATAT
TGATTTTAGA AGAGCCACTG GTATGAGTAA AAGTGGTTTA TCTAAAAAAT
ATATTTCAAT TTTCAATAAA GAAGCCTCAA AAACTGGTAC ATCAACTTTT
TCAAAACAAG AACTCTTACA AATTGTTAAA GAATATAAAT TACCTTTTGA
AAATTTTAAT GATGTTTTAG AAGGTTTAAA TAATCAAGGA AGATTTTAAA
AAGGGTAATA ATAAATATAC AATTACTAG

Translated Amino Acid Sequence Contig-U11273-1

NFFYFHFFCLMYNNNNNNNNTNTQIIRRNNSEGDDYVQFKSQQTIQREQSQQQQQQQQHP
QLDELIGYKLYFPPKTNKIIENGDEKLNQEAILEKRHQFIQLSLPLFRDVCNETLYAPDE
NNTIPLDYQLLKNQIYRVEDQFEIRLRDDSEMVINCLGVVIYQVLYENVSESQRPKKKIN
IRIFHFEPLLQLKKLKANLIDKFVSLKGTVIRVGNVKPLVTQMQFICNKCSTRTPTQYFT
---

---IKMSAPLLSRFDLIFILMDKPNTEKDHIISHNILNLHSNGSGVKKRKPQPIIIIILG
NNKFISIYS*rrs**iitiktkiinnswsrd*fnsnsyp*kiyklckeicftktfrrgn*
sytkilfrtsfkiyrf*fnasynssigiinsfsrskskt*it*nryrtrcnryrrdyerf
tfgyf*r*tw*y*f*kshwye*kwfi*kiyfnfq*rslknwyinffktrtltnc*ri*it
f*kf**cfrrfk*srkilkrviiniqll

Homology Contig-U11273-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U11273-1 (Contig-U11273-1Q) /CSM_Contig/Conti...  2407  0.0
Contig-U14584-1 (Contig-U14584-1Q) /CSM_Contig/Conti...    40  0.007
Contig-U11309-1 (Contig-U11309-1Q) /CSM_Contig/Conti...    40  0.007
Contig-U11749-1 (Contig-U11749-1Q) /CSM_Contig/Conti...    38  0.027
Contig-U11515-1 (Contig-U11515-1Q) /CSM_Contig/Conti...    38  0.027
Contig-U11284-1 (Contig-U11284-1Q) /CSM_Contig/Conti...    38  0.027
Contig-U04445-1 (Contig-U04445-1Q) /CSM_Contig/Conti...    38  0.027
Contig-U01118-1 (Contig-U01118-1Q) /CSM_Contig/Conti...    38  0.027
Contig-U14899-1 (Contig-U14899-1Q) /CSM_Contig/Conti...    36  0.11

Homology Contig-U11273-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ349899) Dictyostelium discoideum cDNA clone:dda38c03, 3' ...  1294   0.0    2
(BJ437091) Dictyostelium discoideum cDNA clone:ddv33m03, 3' ...  1285   0.0    2
(BJ352957) Dictyostelium discoideum cDNA clone:dda48b15, 3' ...  1146   0.0    3
(BJ334980) Dictyostelium discoideum cDNA clone:dda48b15, 5' ...   904   0.0    3
(BJ418554) Dictyostelium discoideum cDNA clone:ddv33m03, 5' ...   904   0.0    3
(BJ332112) Dictyostelium discoideum cDNA clone:dda38c03, 5' ...   825   0.0    3
(BJ368127) Dictyostelium discoideum cDNA clone:ddc45k10, 5' ...   396   e-162  4
(BJ382634) Dictyostelium discoideum cDNA clone:ddc45k10, 3' ...   341   5e-89  1
(GR565284) CBTF1445.b1 CBTF Dictyostelium purpureum 12 hr ve...   228   2e-66  3
(GR576953) CBXW2050.g3 CBXW Dictyostelium purpureum 6 hr veg...   121   2e-49  5

Homology Contig-U11273-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q9UJA3) RecName: Full=DNA replication licensing factor MCM8; Al...   175   1e-49
AL035461_6(AL035461|pid:none) Human DNA sequence from clone RP5-...   175   1e-49
BC101054_1(BC101054|pid:none) Homo sapiens minichromosome mainte...   175   1e-49
CS185598_1(CS185598|pid:none) Sequence 81 from Patent EP1591448.      175   1e-49
BC008830_1(BC008830|pid:none) Homo sapiens minichromosome mainte...   175   1e-49
AK027644_1(AK027644|pid:none) Homo sapiens cDNA FLJ14738 fis, cl...   175   1e-49
(Q9CWV1) RecName: Full=DNA replication licensing factor MCM8; Al...   171   1e-48
AL929562_4(AL929562|pid:none) Mouse DNA sequence from clone RP23...   171   1e-48
BC121433_1(BC121433|pid:none) Xenopus tropicalis minichromosome ...   161   9e-46
AC124963_5(AC124963|pid:none) Medicago truncatula clone mth2-24f...   154   7e-45