Homology Contig-U11265-1 vs Protein
Query= Contig-U11265-1 (Contig-U11265-1Q) /CSM_Contig/Contig-U11265-1Q.Seq.d
(1014 letters)
Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY160092_1(AY160092|pid:none) Dictyostelium discoideum nucleotid... 365 1e-99
BT059307_1(BT059307|pid:none) Salmo salar clone ssal-rgf-540-130... 51 6e-05
BC038960_1(BC038960|pid:none) Homo sapiens hect domain and RLD 3... 50 2e-04
(Q15034) RecName: Full=Probable E3 ubiquitin-protein ligase HERC... 50 2e-04
B38919(B38919) hypothetical protein 2 - human (fragment) &D2521... 50 2e-04
BC059796_1(BC059796|pid:none) Danio rerio regulator of chromosom... 50 2e-04
BT053046_1(BT053046|pid:none) Medicago truncatula clone MTYFL_FM... 50 2e-04
AJ851682_1(AJ851682|pid:none) Gallus gallus mRNA for hypothetica... 49 2e-04
AE017342_374(AE017342|pid:none) Cryptococcus neoformans var. neo... 49 3e-04
BC145978_1(BC145978|pid:none) Mus musculus hect domain and RLD 3... 49 4e-04
BC042574_1(BC042574|pid:none) Mus musculus hect domain and RLD 3... 49 4e-04
AK017531_1(AK017531|pid:none) Mus musculus 8 days embryo whole b... 49 4e-04
(Q86YY7) RecName: Full=Probable E3 ubiquitin-protein ligase HERC... 47 8e-04
AK220338_1(AK220338|pid:none) Mus musculus mRNA for mKIAA0393 pr... 47 8e-04
AF061529_1(AF061529|pid:none) Mus musculus rjs (rjs) mRNA, compl... 47 8e-04
AF225407_1(AF225407|pid:none) Homo sapiens HERC2 (HERC2) gene, e... 47 8e-04
AK148361_1(AK148361|pid:none) Mus musculus B16 F10Y cells cDNA, ... 47 8e-04
(Q7TPR5) RecName: Full=Probable E3 ubiquitin-protein ligase HERC... 47 8e-04
AC114261_1(AC114261|pid:none) Dictyostelium discoideum chromosom... 47 0.001
CP001337_650(CP001337|pid:none) Chloroflexus aggregans DSM 9485,... 47 0.001
(Q6P798) RecName: Full=RCC1 and BTB domain-containing protein 2;... 47 0.001
BC108772_1(BC108772|pid:none) Xenopus laevis chromosome condensa... 46 0.002
CT573073_814(CT573073|pid:none) Kuenenia stuttgartiensis genome ... 45 0.003
AE014134_164(AE014134|pid:none) Drosophila melanogaster chromoso... 45 0.005
(Q8VE37) RecName: Full=Regulator of chromosome condensation; Alt... 45 0.005
AL805897_14(AL805897|pid:none) Mouse DNA sequence from clone RP2... 45 0.005
BT031296_1(BT031296|pid:none) Drosophila melanogaster RH09889 fu... 45 0.005
BC160834_1(BC160834|pid:none) Rattus norvegicus similar to chrom... 45 0.005
BC153215_1(BC153215|pid:none) Bos taurus regulator of chromosome... 44 0.007
AB209543_1(AB209543|pid:none) Homo sapiens mRNA for RCC1-like G ... 44 0.007
AM502235_27(AM502235|pid:none) Leishmania infantum chromosome 17. 44 0.007
CT005256_30(CT005256|pid:none) Leishmania major strain Friedlin,... 44 0.007
(O95199) RecName: Full=RCC1 and BTB domain-containing protein 2;... 44 0.007
(P23800) RecName: Full=Regulator of chromosome condensation; Alt... 44 0.007
BC084600_1(BC084600|pid:none) Xenopus laevis hypothetical LOC495... 44 0.007
AK023010_1(AK023010|pid:none) Homo sapiens cDNA FLJ12948 fis, cl... 44 0.007
AK227929_1(AK227929|pid:none) Arabidopsis thaliana mRNA for hypo... 44 0.007
D00646_1(D00646|pid:none) Xenopus laevis mRNA for RCC1 protein, ... 44 0.009
BC127372_1(BC127372|pid:none) Xenopus tropicalis hypothetical pr... 44 0.009
BC070867_1(BC070867|pid:none) Xenopus laevis chromosome condensa... 44 0.009
(P25183) RecName: Full=Regulator of chromosome condensation; &D... 44 0.009
AC091527_1(AC091527|pid:none) Trypanosoma brucei chromosome 7 cl... 44 0.012
BC110972_1(BC110972|pid:none) Xenopus laevis MGC81587 protein, m... 43 0.015
BC077375_1(BC077375|pid:none) Xenopus laevis MGC81587 protein, m... 43 0.015
(P18754) RecName: Full=Regulator of chromosome condensation; Alt... 43 0.015
AC021640_14(AC021640|pid:none) Arabidopsis thaliana chromosome I... 43 0.015
BC161455_1(BC161455|pid:none) Xenopus tropicalis regulator of ch... 43 0.015
BC149081_1(BC149081|pid:none) Bos taurus hect domain and RLD 5, ... 43 0.020
EU970697_1(EU970697|pid:none) Zea mays clone 349086 hypothetical... 43 0.020
CP001337_652(CP001337|pid:none) Chloroflexus aggregans DSM 9485,... 43 0.020
AK102785_1(AK102785|pid:none) Oryza sativa Japonica Group cDNA c... 43 0.020
AL356173_50(AL356173|pid:none) Neurospora crassa DNA linkage gro... 43 0.020
AM494957_152(AM494957|pid:none) Leishmania braziliensis chromoso... 42 0.026
AK147723_1(AK147723|pid:none) Mus musculus melanocyte cDNA, RIKE... 42 0.026
AL590346_6(AL590346|pid:none) Arabidopsis thaliana DNA chromosom... 42 0.026
(Q6PAV2) RecName: Full=Probable E3 ubiquitin-protein ligase HERC... 42 0.026
BC060033_1(BC060033|pid:none) Mus musculus hect domain and RLD 4... 42 0.026
BC044119_1(BC044119|pid:none) Xenopus laevis chromosome condensa... 42 0.026
BC068656_1(BC068656|pid:none) Xenopus laevis hypothetical protei... 42 0.034
(Q9UII4) RecName: Full=Probable E3 ubiquitin-protein ligase HERC... 42 0.034
DQ317692_73(DQ317692|pid:none) Neodiprion abietis nucleopolyhedr... 42 0.034
CP000698_1764(CP000698|pid:none) Geobacter uraniireducens Rf4, c... 42 0.034
BC140716_1(BC140716|pid:none) Homo sapiens hect domain and RLD 5... 42 0.034
DQ440378_1(DQ440378|pid:none) Aedes aegypti clone AET-505 regula... 42 0.044
DQ415920_45(DQ415920|pid:none) Cleome spinosa clone BAC Cs3, com... 42 0.044
CP000667_1164(CP000667|pid:none) Salinispora tropica CNB-440, co... 42 0.044
FN318183_1(FN318183|pid:none) Schistosoma japonicum isolate Anhu... 42 0.044
BC157279_1(BC157279|pid:none) Xenopus tropicalis hypothetical pr... 41 0.057
BC171125_1(BC171125|pid:none) Xenopus tropicalis hypothetical pr... 41 0.057
AM464085_1(AM464085|pid:none) Vitis vinifera contig VV78X161110.... 41 0.057
BC075441_1(BC075441|pid:none) Xenopus tropicalis MGC89218 protei... 41 0.057
CR761074_1(CR761074|pid:none) Xenopus tropicalis finished cDNA, ... 41 0.057
CT005271_210(CT005271|pid:none) Leishmania major strain Friedlin... 41 0.057
BT039919_1(BT039919|pid:none) Zea mays full-length cDNA clone ZM... 41 0.057
AL133551_9(AL133551|pid:none) Human DNA sequence from clone RP11... 41 0.075
AE014298_3135(AE014298|pid:none) Drosophila melanogaster chromos... 41 0.075
AY650033_1(AY650033|pid:none) Homo sapiens HECT and RCC1 contain... 41 0.075
AK292809_1(AK292809|pid:none) Homo sapiens cDNA FLJ77205 partial... 41 0.075
AK100857_1(AK100857|pid:none) Oryza sativa Japonica Group cDNA c... 41 0.075
AB007646_6(AB007646|pid:none) Arabidopsis thaliana genomic DNA, ... 41 0.075
CP001020_610(CP001020|pid:none) Coxiella burnetii CbuK_Q154, com... 40 0.098
AP008207_3060(AP008207|pid:none) Oryza sativa (japonica cultivar... 40 0.098
BC149504_1(BC149504|pid:none) Bos taurus regulator of chromosome... 40 0.098
AP003251_20(AP003251|pid:none) Oryza sativa Japonica Group genom... 40 0.098
(Q8BTU7) RecName: Full=RCC1 domain-containing protein 1; 40 0.098
BC147875_1(BC147875|pid:none) Bos taurus regulator of chromosome... 40 0.098
BX294379_6(BX294379|pid:none) Zebrafish DNA sequence from clone ... 40 0.13
AE016823_1428(AE016823|pid:none) Leptospira interrogans serovar ... 40 0.13
AB040903_1(AB040903|pid:none) Homo sapiens mRNA for KIAA1470 pro... 40 0.13
BT040520_1(BT040520|pid:none) Zea mays full-length cDNA clone ZM... 40 0.13
A96719(A96719) hypothetical protein T6C23.9 [imported] - Arabido... 40 0.13
AY085145_1(AY085145|pid:none) Arabidopsis thaliana clone 13316 m... 40 0.13
(Q9P258) RecName: Full=Protein RCC2; AltName: Full=Telophase dis... 40 0.13
EF677431_1(EF677431|pid:none) Picea sitchensis clone WS02768_L10... 40 0.13
BC045877_1(BC045877|pid:none) Danio rerio regulator of chromosom... 40 0.13
BC043960_1(BC043960|pid:none) Xenopus laevis hypothetical protei... 40 0.13
AL359612_1(AL359612|pid:none) Homo sapiens mRNA; cDNA DKFZp762N0... 40 0.13
FN314084_1(FN314084|pid:none) Schistosoma japonicum isolate Anhu... 40 0.13
EU960715_1(EU960715|pid:none) Zea mays clone 227856 HECT domain ... 40 0.13
CU633865_185(CU633865|pid:none) Podospora anserina genomic DNA c... 40 0.13
CP000850_4225(CP000850|pid:none) Salinispora arenicola CNS-205, ... 40 0.17
AC024696_9(AC024696|pid:none) Caenorhabditis elegans cosmid F07B... 40 0.17
CP001322_1242(CP001322|pid:none) Desulfatibacillum alkenivorans ... 40 0.17
AK084219_1(AK084219|pid:none) Mus musculus 12 days embryo eyebal... 40 0.17
CP001393_894(CP001393|pid:none) Anaerocellum thermophilum DSM 67... 40 0.17
BT045688_1(BT045688|pid:none) Salmo salar clone ssal-rgf-528-342... 40 0.17
(Q17551) RecName: Full=E3 ubiquitin-protein ligase rpm-1; ... 40 0.17
AL035476_58(AL035476|pid:none) Plasmodium falciparum MAL4P3. &A... 39 0.22
AM270016_34(AM270016|pid:none) Aspergillus niger contig An02c021... 39 0.22
CR848583_1(CR848583|pid:none) Xenopus tropicalis finished cDNA, ... 39 0.22
CP000850_2867(CP000850|pid:none) Salinispora arenicola CNS-205, ... 39 0.22
BC073004_1(BC073004|pid:none) Xenopus laevis MGC82587 protein, m... 39 0.22
CP000595_160(CP000595|pid:none) Ostreococcus lucimarinus CCE9901... 39 0.22
AC117081_24(AC117081|pid:none) Dictyostelium discoideum chromoso... 39 0.22
BC155387_1(BC155387|pid:none) Xenopus tropicalis regulator of ch... 39 0.22
AL132975_24(AL132975|pid:none) Arabidopsis thaliana DNA chromoso... 39 0.22
BT045211_1(BT045211|pid:none) Salmo salar clone ssal-rgf-514-371... 39 0.28
BC069844_1(BC069844|pid:none) Mus musculus RCC1 domain containin... 39 0.28
BT030023_1(BT030023|pid:none) Arabidopsis thaliana At1g27060 mRN... 39 0.28
CP000850_2473(CP000850|pid:none) Salinispora arenicola CNS-205, ... 39 0.28
BT044847_1(BT044847|pid:none) Salmo salar clone ssal-rgf-505-201... 39 0.28
AY349019_69(AY349019|pid:none) Neodiprion lecontei NPV, complete... 39 0.28
BT042464_1(BT042464|pid:none) Zea mays full-length cDNA clone ZM... 39 0.28
CU207211_2086(CU207211|pid:none) Herminiimonas arsenicoxydans ch... 39 0.37
FN357553_25(FN357553|pid:none) Schistosoma mansoni genome sequen... 39 0.37
CP001333_111(CP001333|pid:none) Micromonas sp. RCC299 chromosome... 39 0.37
CP000884_3363(CP000884|pid:none) Delftia acidovorans SPH-1, comp... 39 0.37
BC124691_1(BC124691|pid:none) Danio rerio secretion regulating g... 39 0.37
(P25171) RecName: Full=Regulator of chromosome condensation; Alt... 38 0.49
AP003344_20(AP003344|pid:none) Oryza sativa Japonica Group genom... 38 0.49
CP001032_4229(CP001032|pid:none) Opitutus terrae PB90-1, complet... 38 0.49
CP000113_864(CP000113|pid:none) Myxococcus xanthus DK 1622, comp... 38 0.49
CP000667_1949(CP000667|pid:none) Salinispora tropica CNB-440, co... 38 0.49
AP008207_2693(AP008207|pid:none) Oryza sativa (japonica cultivar... 38 0.49
AE016828_1043(AE016828|pid:none) Coxiella burnetii RSA 493, comp... 38 0.63
AB463349_1(AB463349|pid:none) Synthetic construct DNA, clone: pF... 38 0.63
AC148816_27(AC148816|pid:none) Medicago truncatula chromosome 7 ... 38 0.63
(Q6ZPR6) RecName: Full=Inhibitor of Bruton tyrosine kinase; ... 38 0.63
AC159426_13(AC159426|pid:none) Trypanosoma brucei chromosome 7 c... 38 0.63
AB046813_1(AB046813|pid:none) Homo sapiens mRNA for KIAA1593 pro... 38 0.63
CP001020_948(CP001020|pid:none) Coxiella burnetii CbuK_Q154, com... 38 0.63
AK145735_1(AK145735|pid:none) Mus musculus blastocyst blastocyst... 38 0.63
(Q54Q89) RecName: Full=RCC1 repeat-containing protein DDB_G02840... 38 0.63
CP000890_1167(CP000890|pid:none) Coxiella burnetii RSA 331, comp... 38 0.63
BC137798_1(BC137798|pid:none) Mus musculus inhibitor of Bruton a... 38 0.63
AY663391_2(AY663391|pid:none) Triticum turgidum cultivar Langdon... 37 0.83
AY663392_2(AY663392|pid:none) Triticum aestivum cultivar Renan c... 37 0.83
CP001324_201(CP001324|pid:none) Micromonas sp. RCC299 chromosome... 37 0.83
BC129717_1(BC129717|pid:none) Xenopus laevis hypothetical protei... 37 0.83
(Q6NYE2) RecName: Full=Protein RCC2 homolog; &BC066628_1(BC0666... 37 0.83
CP000583_565(CP000583|pid:none) Ostreococcus lucimarinus CCE9901... 37 0.83
(Q9NB71) RecName: Full=E3 ubiquitin-protein ligase highwire; ... 37 0.83
CP000679_839(CP000679|pid:none) Caldicellulosiruptor saccharolyt... 37 0.83
AK117526_1(AK117526|pid:none) Arabidopsis thaliana At5g48330 mRN... 37 0.83
AF262977_1(AF262977|pid:none) Drosophila melanogaster highwire (... 37 0.83
CP001159_266(CP001159|pid:none) Thalassiosira pseudonana CCMP133... 37 0.83
CP000667_1178(CP000667|pid:none) Salinispora tropica CNB-440, co... 37 0.83
AJ720536_1(AJ720536|pid:none) Gallus gallus mRNA for hypothetica... 37 1.1
CR954216_207(CR954216|pid:none) Ostreococcus tauri strain OTTH05... 37 1.1
AY730336_7(AY730336|pid:none) Solanum tuberosum strain P6/210 cl... 37 1.1
EF514212_36(EF514212|pid:none) Solanum tuberosum strain P6/210 c... 37 1.1
(P28745) RecName: Full=Protein pim1; AltName: Full=Poly(A)+ RNA ... 37 1.1
CP000850_2866(CP000850|pid:none) Salinispora arenicola CNS-205, ... 37 1.1
CP000850_1045(CP000850|pid:none) Salinispora arenicola CNS-205, ... 37 1.1
AM055943_142(AM055943|pid:none) Toxoplasma gondii RH, genomic DN... 37 1.1
CP000350_1402(CP000350|pid:none) Leptospira borgpetersenii serov... 37 1.4
AY650032_1(AY650032|pid:none) Homo sapiens HECT and RCC1 contain... 37 1.4
T28816(T28816)hypothetical protein F07C3.4 - Caenorhabditis eleg... 37 1.4
AP007155_243(AP007155|pid:none) Aspergillus oryzae RIB40 genomic... 37 1.4
CR859608_1(CR859608|pid:none) Pongo abelii mRNA; cDNA DKFZp468J0... 37 1.4
BC143736_1(BC143736|pid:none) Homo sapiens inhibitor of Bruton a... 37 1.4
AL050333_2(AL050333|pid:none) Human DNA sequence from clone RP1-... 37 1.4
AM270234_2(AM270234|pid:none) Aspergillus niger contig An11c0170... 37 1.4
AE016819_189(AE016819|pid:none) Ashbya gossypii (= Eremothecium ... 37 1.4
AB037838_1(AB037838|pid:none) Homo sapiens mRNA for KIAA1417 pro... 37 1.4
AL163815_17(AL163815|pid:none) Arabidopsis thaliana DNA chromoso... 37 1.4
DQ005634_1(DQ005634|pid:none) Homo sapiens inhibitor of Bruton's... 37 1.4
(Q8BK67) RecName: Full=Protein RCC2; &AK076040_1(AK076040|pid:n... 37 1.4
AK069920_1(AK069920|pid:none) Oryza sativa Japonica Group cDNA c... 37 1.4
AE014186_365(AE014186|pid:none) Plasmodium falciparum 3D7 chromo... 36 1.8
AL732347_10(AL732347|pid:none) Oryza sativa genomic DNA, chromos... 36 1.8
AP008213_299(AP008213|pid:none) Oryza sativa (japonica cultivar-... 36 1.8
AC009755_4(AC009755|pid:none) Arabidopsis thaliana chromosome II... 36 1.8
AB300377_6(AB300377|pid:none) Uncultured bacterium genomic DNA, ... 36 1.8
DQ156349_16(DQ156349|pid:none) Uncultured marine group II euryar... 36 1.8
AC104285_16(AC104285|pid:none) Oryza sativa (japonica cultivar-g... 36 1.8
AM746676_189(AM746676|pid:none) Sorangium cellulosum 'So ce 56' ... 36 1.8
AP006852_254(AP006852|pid:none) Candida albicans genomic DNA, ch... 36 2.4
AC025721_10(AC025721|pid:none) Caenorhabditis elegans cosmid Y48... 36 2.4
AK149648_1(AK149648|pid:none) Mus musculus bone marrow macrophag... 36 2.4
AX420042_1(AX420042|pid:none) Sequence 4 from Patent WO0206330. 36 2.4
AC007797_6(AC007797|pid:none) Arabidopsis thaliana chromosome I ... 36 2.4
(Q86SG6) RecName: Full=Serine/threonine-protein kinase Nek8; ... 36 2.4
AF049867_1(AF049867|pid:none) Candida albicans Prp20p (PRP20) ge... 36 2.4
AK015214_1(AK015214|pid:none) Mus musculus adult male testis cDN... 36 2.4
AL033396_5(AL033396|pid:none) C.albicans cosmid Ca35A5. &T18221... 36 2.4
CR940352_512(CR940352|pid:none) Theileria annulata strain Ankara... 36 2.4
AC141322_14(AC141322|pid:none) Medicago truncatula clone mth2-8e... 36 2.4
AJ243951_1(AJ243951|pid:none) Homo sapiens mRNA for deafness loc... 36 2.4
AK011047_1(AK011047|pid:none) Mus musculus 13 days embryo liver ... 36 2.4
CP000850_1498(CP000850|pid:none) Salinispora arenicola CNS-205, ... 36 2.4
BT064987_1(BT064987|pid:none) Zea mays full-length cDNA clone ZM... 36 2.4
AK296379_1(AK296379|pid:none) Homo sapiens cDNA FLJ58161 complet... 36 2.4
AB017067_24(AB017067|pid:none) Arabidopsis thaliana genomic DNA,... 36 2.4
(Q9UGK8) RecName: Full=Secretion-regulating guanine nucleotide e... 36 2.4
FM992694_243(FM992694|pid:none) Candida dubliniensis CD36 chromo... 35 3.1
(P52499) RecName: Full=Protein RCC1; &X96850_1(X96850|pid:none) 35 3.1
AB015472_11(AB015472|pid:none) Arabidopsis thaliana genomic DNA,... 35 3.1
FN357339_31(FN357339|pid:none) Schistosoma mansoni genome sequen... 35 3.1
EU975633_1(EU975633|pid:none) Zea mays clone 494912 unknown mRNA. 35 3.1
AJ851734_1(AJ851734|pid:none) Gallus gallus partial mRNA for hyp... 35 3.1
AK147848_1(AK147848|pid:none) Mus musculus melanocyte cDNA, RIKE... 35 3.1
CP000233_397(CP000233|pid:none) Lactobacillus salivarius UCC118,... 35 3.1
BX538351_89(BX538351|pid:none) Cryptosporidium parvum chromosome... 35 3.1
DQ148194_1(DQ148194|pid:none) Macaca mulatta clone ss1_k15_t7_41... 35 3.1
(Q80YD6) RecName: Full=Secretion-regulating guanine nucleotide e... 35 3.1
EU961852_1(EU961852|pid:none) Zea mays clone 238649 protein RCC2... 35 3.1
AL132960_13(AL132960|pid:none) Arabidopsis thaliana DNA chromoso... 35 3.1
CP000686_409(CP000686|pid:none) Roseiflexus sp. RS-1, complete g... 35 3.1
AL161538_32(AL161538|pid:none) Arabidopsis thaliana DNA chromoso... 35 3.1
AB023041_29(AB023041|pid:none) Arabidopsis thaliana genomic DNA,... 35 3.1
CP001576_24(CP001576|pid:none) Micromonas sp. RCC299 chromosome ... 35 3.1
BC049603_1(BC049603|pid:none) Mus musculus secretion regulating ... 35 3.1
AY035031_1(AY035031|pid:none) Arabidopsis thaliana unknown prote... 35 3.1
CP001576_159(CP001576|pid:none) Micromonas sp. RCC299 chromosome... 35 3.1
AK145819_1(AK145819|pid:none) Mus musculus 12 days pregnant adul... 35 3.1
CT005268_277(CT005268|pid:none) Leishmania major strain Friedlin... 35 4.1
AL592312_9(AL592312|pid:none) Arabidopsis thaliana DNA chromosom... 35 4.1
(P0C5Y8) RecName: Full=Alsin; AltName: Full=Amyotrophic lateral ... 35 4.1
AC108501_10(AC108501|pid:none) Oryza sativa (japonica cultivar-g... 35 4.1
(Q15751) RecName: Full=Probable E3 ubiquitin-protein ligase HERC... 35 4.1
CP000348_1617(CP000348|pid:none) Leptospira borgpetersenii serov... 35 4.1
AP008211_1044(AP008211|pid:none) Oryza sativa (japonica cultivar... 35 4.1
AL590444_151(AL590444|pid:none) chromosome IV of strain GB-M1 of... 35 4.1
AE014297_3198(AE014297|pid:none) Drosophila melanogaster chromos... 35 4.1
(Q4R828) RecName: Full=RCC1 domain-containing protein 1; &AB168... 35 4.1
CP001574_33(CP001574|pid:none) Micromonas sp. RCC299 chromosome ... 35 5.4
CP000323_1227(CP000323|pid:none) Psychrobacter cryohalolentis K5... 35 5.4
(Q6NRS1) RecName: Full=Inhibitor of Bruton tyrosine kinase; ... 35 5.4
AP008210_2172(AP008210|pid:none) Oryza sativa (japonica cultivar... 35 5.4
AL606686_5(AL606686|pid:none) Oryza sativa genomic DNA, chromoso... 35 5.4
CP001393_2469(CP001393|pid:none) Anaerocellum thermophilum DSM 6... 35 5.4
CT573073_596(CT573073|pid:none) Kuenenia stuttgartiensis genome ... 35 5.4
AM473292_3(AM473292|pid:none) Vitis vinifera contig VV78X152298.... 35 5.4
CP000667_4508(CP000667|pid:none) Salinispora tropica CNB-440, co... 35 5.4
BT048629_1(BT048629|pid:none) Salmo salar clone ssal-evd-527-364... 34 7.0
CP001324_673(CP001324|pid:none) Micromonas sp. RCC299 chromosome... 34 7.0
AK054242_1(AK054242|pid:none) Mus musculus 2 days pregnant adult... 34 7.0
AK149626_1(AK149626|pid:none) Mus musculus bone marrow macrophag... 34 7.0
CR940347_498(CR940347|pid:none) Theileria annulata strain Ankara... 34 7.0
AY184993_1(AY184993|pid:none) Dictyostelium discoideum inositol ... 34 7.0
(Q91ZT5) RecName: Full=FYVE, RhoGEF and PH domain-containing pro... 34 7.0
BX321880_5(BX321880|pid:none) Zebrafish DNA sequence from clone ... 34 7.0
CP000850_1058(CP000850|pid:none) Salinispora arenicola CNS-205, ... 34 7.0
AF402613_1(AF402613|pid:none) Mus musculus actin-binding protein... 34 7.0
AK138977_1(AK138977|pid:none) Mus musculus adult male aorta and ... 34 9.2
BC004933_1(BC004933|pid:none) Homo sapiens regulator of chromoso... 34 9.2
AK038652_1(AK038652|pid:none) Mus musculus adult male hypothalam... 34 9.2
CP000585_188(CP000585|pid:none) Ostreococcus lucimarinus CCE9901... 34 9.2
AK136298_1(AK136298|pid:none) Mus musculus 15 days embryo male t... 34 9.2
AK017192_1(AK017192|pid:none) Mus musculus 11 days pregnant adul... 34 9.2
AK101326_1(AK101326|pid:none) Oryza sativa Japonica Group cDNA c... 34 9.2
(Q9R0X5) RecName: Full=X-linked retinitis pigmentosa GTPase regu... 34 9.2
CP000584_153(CP000584|pid:none) Ostreococcus lucimarinus CCE9901... 34 9.2
AF334406_1(AF334406|pid:none) Homo sapiens CLLL7 protein (CLLD7)... 34 9.2
AE017342_396(AE017342|pid:none) Cryptococcus neoformans var. neo... 34 9.2
CP000599_73(CP000599|pid:none) Ostreococcus lucimarinus CCE9901 ... 34 9.2
AK117198_1(AK117198|pid:none) Arabidopsis thaliana At3g03790 mRN... 34 9.2
AK029864_1(AK029864|pid:none) Mus musculus adult male testis cDN... 34 9.2
AK101767_1(AK101767|pid:none) Oryza sativa Japonica Group cDNA c... 34 9.2
AB025608_18(AB025608|pid:none) Arabidopsis thaliana genomic DNA,... 34 9.2
CR954220_72(CR954220|pid:none) Ostreococcus tauri strain OTTH059... 34 9.2
BC038104_1(BC038104|pid:none) Homo sapiens regulator of chromoso... 34 9.2
AF044677_1(AF044677|pid:none) Mus musculus retinitis pigmentosa ... 34 9.2
>AY160092_1(AY160092|pid:none) Dictyostelium discoideum nucleotide
exchange factor RasGEF C (gefC) gene, complete cds.
Length = 1457
Score = 365 bits (938), Expect = 1e-99
Identities = 197/257 (76%), Positives = 198/257 (77%)
Frame = +3
Query: 243 LENHSVRNIVMGNFHLVCLTDSGEVVTIGRNKTGQLGRTDAENEPGIVKQLSFDPDGLNS 422
LENHSVRNIVMGNFHLVCLTDSGEVVTIGRNKTGQLGRTDAENEPGIVKQLSFDPDGLNS
Sbjct: 569 LENHSVRNIVMGNFHLVCLTDSGEVVTIGRNKTGQLGRTDAENEPGIVKQLSFDPDGLNS 628
Query: 423 DEFVVSIAAGEFHSVALVENTPKTKLALQLVRMQRNYLRQLNILNNIYYKSMMSMASPYD 602
DEFVVSIAAGEFHSVALVENTPKTKLALQLVRMQRNYLRQLNILNNIYYKSMMSMASPYD
Sbjct: 629 DEFVVSIAAGEFHSVALVENTPKTKLALQLVRMQRNYLRQLNILNNIYYKSMMSMASPYD 688
Query: 603 PVVLSMMNNGSAXXXXXXXXXXXXXXXDNANNTIKNGKDKXXXXXXXXXXXXXXXXXXXX 782
PVVLSMMNNGSA DNANNTIKNGKDK
Sbjct: 689 PVVLSMMNNGSASTLPPSLKGLSGGLPDNANNTIKNGKDKDNHHNGDSNGHHSNGHYHGN 748
Query: 783 XXXXXXXXXXXXXXXXXXXXXXXXTLKSRSASIATIRGLFGINHMLHHSQSQSFQEEDST 962
TLKSRSASIATIRGLFGINHMLHHSQSQSFQEE+ST
Sbjct: 749 GNNGNNSITTSNSISSPSLLGSGGTLKSRSASIATIRGLFGINHMLHHSQSQSFQEENST 808
Query: 963 VTEDEIKEIFSDIEALS 1013
VTEDEIKEIFSDIEALS
Sbjct: 809 VTEDEIKEIFSDIEALS 825
Score = 40.4 bits (93), Expect = 0.098
Identities = 18/40 (45%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
Frame = +3
Query: 243 LEN---HSVRNIVMGNFHLVCLTDSGEVVTIGRNKTGQLG 353
LEN ++++ + +GN+H+V LT+ G V T G N GQLG
Sbjct: 327 LENSPLNTIKQVALGNYHIVLLTEGGNVWTWGSNSNGQLG 366
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 962,199,797
Number of extensions: 13969000
Number of successful extensions: 45006
Number of sequences better than 10.0: 274
Number of HSP's gapped: 44928
Number of HSP's successfully gapped: 440
Length of query: 338
Length of database: 1,040,966,779
Length adjustment: 129
Effective length of query: 209
Effective length of database: 627,614,014
Effective search space: 131171328926
Effective search space used: 131171328926
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
Dictyostelium discoideum cDNA Project Home