Dictyostelium discoideum cDNA Contig-U11264-1

Assembled

Chromosomal Location of Contig-U11264-1

Sequence Contig-U11264-1

GAGTTGCATC AGTTTCAAAA TTATTCACAT ATGTTGCAAT ACTTCAACTT
GTTGATAAAG GTTTACTATC ACTTGAAGAT CCAGTAACTA AATATATACC
TGATTTTCAT CCAAAAAATC CACAATCAAC AACTTATTCA AATAAAAAAG
AATTTGAACC TGATCTTTAT AAGAAAATTA CAGTTTTTAA TTTAATTAGA
CATACATCTG GATTAATTAG AGAACCAATT GAAGGTAATT ATTTTAATGA
AATTCAAAGT GATTTAATTA CATTAGTTAA AACAATGAAT GAATCATCAT
TGGTTAGTGA ACCATGGACA GAACATAAAT ATTCAAATGC AGCAGTCGCA
ATTGCAGGTT ATATTGTTGA AGTTGTTAGT GGTGAAACAT TTCCAGATTA
TGTTGAAAAG AATATTTTAA AACCATTGGG TATGTTAAAT TCTACATTTA
AGAATGAATA TGCTTATACA GAAGTAAAAG ATGAAAATCA ATTAAGAACA
GCCACTGGAC ATATGTGGAG ATATTGGGAT GAGACTACAA CCGATTTATC
AGTTTATAAA GAAGCACCAT TAACTTATTT TGGTATGTTT CCAGCCCGCT
GGTCTTGCAA CAACTGTTGA TGATATTTCC AAGTTTTTAC AATTCTTTTT
ACAAGATGGT AAACCATTAT TAAAGTATGA TACTTTTGTT CAATTCCTAA
CTCAACAACC ATTAAAGGCA CCAATAAAAC CAGAGAATAT AGATACTTTG
GAATTCCCAT ACGTTTACAA CGAAAGTGCA GTTGCCCAAA CACCAACATC
AACTGGTACC TCAAGTTATG GTCTTGGTGT TGAAATTACT AATTTCTTTG
GATACCAAAT CGCAAGAC-- --------CA CCAACTGCAA TGTATAATAA
TGAAATCATT TCATTCCATA TGAAAAATGG TGTACCACTA TTCTTATCAC
TTAGTGGTAT TAAATTTAAA TTTCAATCAA TGTCAACTCA ACAACAACAA
CAACAACCAG GTGTTTATCC AAAAGATATA TGTTCAAAAG CATTAGCTGA
ATCATTTAAT ACTCCATTCC CATTTGAGGA TGAAAATGCA AGAATCAATC
ATAATTTAGT AGATTTATCA AGCATATCAC CAACTCTTAA ATTTGATATT
AAATATGCAA CCACTGATAA CTTTACAGGT ATTCAACTTT ATAAACAAGC
AAAAGCATTT TTAAATAAAG ATGCTGCTAA ATGTTTATTA TCAGCTCATA
ATTGGTTAGT AGAGAATTGG AATGTTGGTA TTATAGTTTT CGATTCCTAT
AGACCATGGA ATATCACATG GACAATGGCA GAATCGGTTA TACCAGAATT
TAGAGGTCTA TATGTTGCAC CACCAACCAA AGGTTCAGTT CATAATCGTG
GTGGTGCACT TGATATCTCA TTATATGATT TATCAAATGG TAAAGTAATT
GAAATGGTTG GTGATTTCGA TGAATTTAGT ATTCGTTCTC ATCGTTCTTA
TTTTGGTGGT TCAGAACTTC AACGTTGGTA TAGAAAACTT TTAACAATTG
CATTAATCAA TAATAATTTC AGACCAAATG AACACGAATG GTGGCATTTT
GATATAATTG TTGATAAACC ATTAGCAGTT TTAAATTTAC AATTTGATCA
AATTAATTAA AATATAAAAT AAAATAAAAT AAATAATTAA TTTTTTTTAT
ATACAAAAAA AAAAAAAA

Translated Amino Acid Sequence Contig-U11264-1

elhqfqnyshmlqyfnllikvyyhlkiq*lniylifiqkihnqqliqikknlnlifirkl
qfli*ldihld*lenqlkviilmkfkvi*lh*lkq*mnhhwlvnhgqniniqmqqsqlqv
illkllvvkhfqimlkrif*nhwvc*ilhlrmnmliqk*kmkin*eqpldicgdigmrlq
piyqfikkhh*LILVCFQPAGLATTVDDISKFLQFFLQDGKPLLKYDTFVQFLTQQPLKA
PIKPENIDTLEFPYVYNESAVAQTPTSTGTSSYGLGVEITNFFGYQIAR---

---PTAMYNNEIISFHMKNGVPLFLSLSGIKFKFQSMSTQQQQQQPGVYPKDICSKALAE
SFNTPFPFEDENARINHNLVDLSSISPTLKFDIKYATTDNFTGIQLYKQAKAFLNKDAAK
CLLSAHNWLVENWNVGIIVFDSYRPWNITWTMAESVIPEFRGLYVAPPTKGSVHNRGGAL
DISLYDLSNGKVIEMVGDFDEFSIRSHRSYFGGSELQRWYRKLLTIALINNNFRPNEHEW
WHFDIIVDKPLAVLNLQFDQIN*nik*nkinn*fflytkkkk

Homology Contig-U11264-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U11264-1 (Contig-U11264-1Q) /CSM_Contig/Conti...  1899  0.0
Contig-U13633-1 (Contig-U13633-1Q) /CSM_Contig/Conti...    40  0.008
Contig-U13413-1 (Contig-U13413-1Q) /CSM_Contig/Conti...    38  0.031
Contig-U12753-1 (Contig-U12753-1Q) /CSM_Contig/Conti...    38  0.031
Contig-U12191-1 (Contig-U12191-1Q) /CSM_Contig/Conti...    38  0.031
Contig-U11781-1 (Contig-U11781-1Q) /CSM_Contig/Conti...    38  0.031
Contig-U01845-1 (Contig-U01845-1Q) /CSM_Contig/Conti...    38  0.031
Contig-U01005-1 (Contig-U01005-1Q) /CSM_Contig/Conti...    38  0.031
Contig-U14785-1 (Contig-U14785-1Q) /CSM_Contig/Conti...    36  0.12
Contig-U13795-1 (Contig-U13795-1Q) /CSM_Contig/Conti...    36  0.12

Homology Contig-U11264-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ446680) Dictyostelium discoideum cDNA clone:ddv63b18, 3' ...  1273   0.0    1
(BJ446241) Dictyostelium discoideum cDNA clone:ddv62i02, 3' ...  1263   0.0    2
(BJ349593) Dictyostelium discoideum cDNA clone:dda37b03, 3' ...  1263   0.0    2
(BJ446208) Dictyostelium discoideum cDNA clone:ddv62b05, 3' ...  1257   0.0    1
(BJ427340) Dictyostelium discoideum cDNA clone:ddv62i02, 5' ...  1181   0.0    1
(BJ332042) Dictyostelium discoideum cDNA clone:dda37b03, 5' ...  1181   0.0    2
(BJ378882) Dictyostelium discoideum cDNA clone:ddc33k04, 3' ...  1172   0.0    2
(BJ356038) Dictyostelium discoideum cDNA clone:dda59e01, 3' ...  1148   0.0    2
(BJ382688) Dictyostelium discoideum cDNA clone:ddc45g13, 3' ...  1122   0.0    2
(BJ356509) Dictyostelium discoideum cDNA clone:dda60e14, 3' ...  1122   0.0    2

Homology Contig-U11264-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


CP000473_7444(CP000473|pid:none) Solibacter usitatus Ellin6076, ...   151   6e-35
CP000360_2741(CP000360|pid:none) Acidobacteria bacterium Ellin34...   149   3e-34
CP001340_2354(CP001340|pid:none) Caulobacter crescentus NA1000, ...   148   5e-34
AE005673_2256(AE005673|pid:none) Caulobacter crescentus CB15, co...   148   5e-34
CP000927_1402(CP000927|pid:none) Caulobacter sp. K31, complete g...   143   2e-32
CP001097_1231(CP001097|pid:none) Chlorobium limicola DSM 245, co...   115   6e-24
CP000113_6254(CP000113|pid:none) Myxococcus xanthus DK 1622, com...   108   6e-22
CP000685_4562(CP000685|pid:none) Flavobacterium johnsoniae UW101...   103   2e-20
CU928163_1716(CU928163|pid:none) Escherichia coli UMN026 chromos...    96   3e-18
EU901052_1(EU901052|pid:none) Escherichia coli strain 87-14 hypo...    96   3e-18