Dictyostelium discoideum cDNA Contig-U11253-1

Assembled

Chromosomal Location of Contig-U11253-1

Sequence Contig-U11253-1

TATAATCATC ATAGTTTTAT CTTTTATTGA TGGTGTAAGT CCAACTGGTA
AATTTACAAC ATTAGGTCCT TGGTTAATTA CAATTACAAT TTCAGTTTTA
AGAGAAATTA TTGAAGATTT AAAAAGACAA AAACAAGATG AAGCAGTAAA
TTATGGTACA TCAGAAGTAT TTAGAAATGG ACAATTTGTT CAAACATTAT
GGAAAGATAT TAGAGTTGGT GATATTGTTA AAGTACGTAA TAGACAATAT
TTTCCAGCTG ATATTTATAT ATTTTCAACT AGTGAACCAG AGAATGTTTG
TTGGTTCGAA TCAAAGAATT TAGATGGCGA AACCAATTTA AAACAAAGAC
AAGCCACAAA AGAAACAATT TATCTAAAAG ATAATGCTGA ATTACTTTCA
AATTTTTGTG GTTTAATTGA ATGTAATTCA CCAACTAAAG ATTTACTACA
TCTTAAAGGT TCTTTCTTTT TTGATGATAA TTATGTAATT TTAACACCAA
AACAATTATT ATTAAGAGGT ACAAAATTAA GAAATACAGA GTGGATTAAT
GGTGTTGTAA TGTATACTGG TATTGATACA AAATTAATGC AAAATACAGA
AAAAGTTAAA GAAAAGAAAA GTCATATTGA AGATTTGACT AATCATTTTA
TAATATTCAT ATTTTTTTTA CAAATTTTAT TATGTGGTGG TAGTGCAATT
GCAAATGGTG TTTGGAGTAC AAGTAATCAC GATGTTTGGT ATTTATTATT
TACAGCAACT GGTATAGTGG AGGGTGGTAA ATCATTTTTA ACATTCTTGG
TACTCTATAA TAATATTATA CCAATTTCAT TCTATGCTAC AATTGAAGTG
GTAAGATTCA TTCAAACCTG CTTCATTAAT AATGATGTTG AAATGTATCA
TGAAGAAACT GATACACCAG CACTTGTAAA AACTGCAAAT TTAAATGAGG
AATTAGGTCA AATTGAATAT GTTTTCACTG ATAAAACTGG TACTTTAACT
CAAAATGCAA TGACTTTTAA AAAATGTTCA ATTGGTGGTT ATGTTTATGG
TGATAATTCA AGTACAAATA CAAATAGTAA CAATAATAAT TATGATGATA
GTAATGGTGG TGCAAGTGGT AGTGGTAATG GTAATGAAAT TAGATCAAAT
GAAATGATGT CATTAGAAAT ACCAATTTCA CCAACTTATC ATACTGGTAT
TACAAATTAT GATTTAAATA ATAATAATAA TAATAATAAT AGTAATAATG
GTAATGGTAA TGGTGCTGGT TCATCATCAT CATCAAATTC AAATTCAAAT
TATACAAAAC AATTAATACC ATTTGTTGAT TTAAATGATG ATAAATTATT
AGAAGATTTA CACGCAAAGA ATGAACAATC AAGATTGATT GAAGAATTTT
TCTATGTTTT ATCAATTTGT CATAGTGTTA TACCATTACA AGAGGATGGT
AAAGTTAGTT ATATTGCAAC ATCACCCGAT GAGAATGCAT TGGTATTTGC
TGCTAAATCA TTTGGATTCG AATTCATACA CAAGACAACC AAAGCGGTCT
ATTTAAAAAA GAATGGTGTC GAAGATTTGA AATTTGAGTT ATTGAATGTT
TTAGACTTTT CATCGGAACG TAAGAGAATG AGTGTCATTG TCAAGACGCC
AACTGGTAGG ATCATGTTAT ATTGTAAAGG TGCGGATTCA GTGATCTTTG
ATAAATTGGC ACCCAATCAA CCAAATGCCG ATACTTCAAT TACTCACATT
CAAGATTTTG GTTACCAAGG TTTAAGAACA CTTTGTGTGG CCTCCACTCA
ATTGGATGAA CGTGTCTATC AACAATGGGC ACAACAATAT CATGCGGCTT
GTTCATTAAC CATTGGTTTG GATGTACCTT CACAATTGGA GAAAGATAAA
GAGATTGAAC GTGTTGCTGA ATTGATTGAA ACCGATTTCC AATTGTTGGG
TGTAACCGGT GTTGAAGATA AACTTCAAGA GGGTGTACCT GAAACCATTC
AATTACTAAC TGAAGCCGGT ATTAAAATGT GGATGTTGAC TGGTGATGGT
CAAGAGAATG CTATCAACAT TGGTTATAGT TCAGGTTTAA TGAATGAAAA
TTATGAAATG ATCATTATCA ATGAACGTAC AAAAGAGAAT GCAATTCAAG
AATTAAATAG ACATGTTGGT GAACAAATTA TACTTCAACA GGAGAATAAT
AACAATAATA ATGATGGTAA TGATTCAAAT AACAACAATG GTGGTGATGA
TGATGATGGA TCAATTACAA GAAATGAAGA AAGAAATAAA TTGGTATTGG
TTATTGATGG TGGTACATTA AAGTTTGTAT TGGATGATGC AGTTGGTTTT
ACATTCCTTA GATTGGCTAA AATGTGTGAT ACTGTTATAT GTTGTCGTGT
TTCAGCACAT CAAAAATCAA AGATTGTTAA ATTGGTACGT AAAACATTTG
CTCCAAAAAC TTTGGCAATC GGTGATGGTG CCAATGATGT AATGATGATT
CAATGTGCTC ATGTTGGTAT TGGTATCAAT GGAAAGGAGG GTAATCAAGC
CATTTATGCA GCAGACTATT CAATCTCTCA ATTTCAACAT CTTGGGTCGT
TTATTGATGG TGCATGGTCA TCATAGTTAT CGTAGAATGT CAAAACTCAT
TTGTTATATC TTTTATAAAA ACATTGTACT ATACTTTTGC CAATTTTTAT
TTGCCATTTT CTCTGGTTGG TCAGGGTCAA ACATTATTTG AAACTTATAA
TCTAACAGCC TACAGTGTAG TTTACACTCT CATACCATTG ATCGTCTATT
GTGTCTTGGA AAAGGATGTC AACGAGCGTA CAATCTATCA ACATCCTCAA
CTTTACAAAG AAGGTATTCA ACATAAATAT TTCAATCATT TCACTTTTCT
ACAATGGATT GCCAATGGAT TCTATCATGG TTTCGTGGCC TTCGCTTTGG
TGTATTGTAC AGTGGTAAAG AGTAATCCAT TCACCAATGG TCAAACTCAA
GAACTTTACG CATTTGGTAT CATTGTCTAT AGTTGTGTCA TGCTAATTGT
CACCTTGAAA TTGGCTTTGG AAACTCATCA TTGGACTTGG ATCAATCATT
TGGCAATGTG GGGTAGTTTA GTGGTATTCT TCATTTGGAA TGTAATTTAT
GCAACTATCA ATACCACCGC CGTCGGTTCA AATGTTTACT ACGCCATCTT
CCACATTGGT GAATCGGCTC ACTATTATCT ACTCTTGGTT TTCGTACCAA
CTTTAGCCCT TTGGAGAGAT TTCACTTGGA AATATGTTTA TCGTACTTTC
TTACCTGATC AGTCTCATAT CATTCAAGAA ATTCAAAGAA AAAATAATAA
TAACGCTGCT AATAGCAAAT TTAAAGATGA TTTAGATATT AAATCTTATC
GTCCTAATAA TGTAAAAAGA TCAACTTCCT CTTATTCAAT TTCTCAAGAA
GGTAGTAATT CAATACCTTT AAAAAATTTA AAAAATTCTA ATTAATAATA
ATAAATAAAT CAATAAATGT ATATATTTAA TTTTAAAAAA AAAAAAAAAA
AAAAAAAAAA AAAAA----- -----TTGCA CTCTCAATTA GTCAATTTTG
GTTTGGTTTC TTTCAGGCTT TAGTGGTCAA ATGATTTATT TCGATTTCCT
TTTCACTCTT TACAATGCAT TGTTCACATC ATTACCTGTC ATATTTTTAG
GTACATTCGA TCAAGACACC AAAGAGGATG ACCTATTGAA CAAACCATAT
CTCTATAGGG TTTGTCAATC AAAATTCACC ATTTTCAACT TGGAAATTTA
TTTGGTGGGT TTTCATTGGT ATGTGGCAAT CAGCAACTAT TTTCTTTGTA
ACCTTTTTCG TAATGAATAC TTCAACCATT GAAGGTGGTA AAACTCTTGG
TCTTTGGTCC ATTGGTACTG CTGCCTACAT TTATTTGGTA GTCACTGTCA
ATTTACAAAT TAGTTTCATC ACTCGTTATT GGACTCGTCA AACCATTTTA
GCCGTATCCA TTAGTGTTGT CTCCACTTTC CTATTTGTAA TGTTGTATAG
TGTACTCGGT AGATACGTAG AAGCTGATGC AACCCATATC ATCTTTGAAC
TCTATGCTTT ACCAACCTTT TGGCTACTTT TAATTATTGC TCCATCAATT
GCTTTATTAC CTTATATAAT TGTATCTTTA AATAGTTGGT TATTTAATAC
TGATAATTTA TCTTTACAAA AACTAAATTT AGAGAAAAAA GGTTTTATTA
TGAGAANATT TATAAATAAA AATTTTAAAA AAAAGNAAAA AAAGNAAA

Translated Amino Acid Sequence Contig-U11253-1

iiiivlsfidgvsptgkfttlgpwlititisvlreiiedlkrqkqdeavnygtsevfrng
qfvqtlwkdirvgdivkvrnrqyfpadiyifstsepenvcwfesknldgetnlkqrqatk
etiylkdnaellsnfcgliecnsptkdllhlkgsfffddnyviltpkqlllrgtklrnte
wingvvmytgidtklmqntekvkekkshiedltnhfiififflqillcggsaiangvwst
snhdvwyllftatgiveggksfltflvlynniipisfyatievvrfiqtcfinndvemyh
eetdtpalvktanlneelgqieyvftdktgtltqnamtfkkcsiggyvygdnsstntnsn
nnnyddsnggasgsgngneirsnemmsleipisptyhtgitnydlnnnnnnnnsnngngn
gagsssssnsnsnytkqlipfvdlnddklledlhakneqsrlieeffyvlsichsviplq
edgkvsyiatspdenalvfaaksfgfefihkttkavylkkngvedlkfellnvldfsser
krmsvivktptgrimlyckgadsvifdklapnqpnadtsithiqdfgyqglrtlcvastq
ldervyqqwaqqyhaacsltigldvpsqlekdkeiervaelietdfqllgvtgvedklqe
gvpetiqllteagikmwmltgdgqenainigyssglmnenyemiiinertkenaiqelnr
hvgeqiilqqennnnnndgndsnnnnggddddgsitrneernklvlvidggtlkfvldda
vgftflrlakmcdtviccrvsahqkskivklvrktfapktlaigdgandvmmiqcahvgi
gingkegnqaiyaadysisqfqhlgsfidgawss*ls*nvkthllyll*khctillpifi
chflwlvrvkhylklii*qptv*ftlsyh*ssivswkrmstsvqsinilnftkkvfnini
siislfynglpmdsimvswpslwcivqw*rvihspmvklknfthlvslsivvsc*lsp*n
wlwkliiglgsiiwqcgvv*wyssfgm*fmqlsipppsvqmfttpsstlvnrltiiyswf
syql*pfgeislgnmfivlsylislisfkkfkekiiitllianlkmi*ilnlivlim*kd
qlpliqflkkvviqyl*ki*kilinnnk*INKCIYLILKKKKKKKKKK---

---ALSISQFWFGFFQALVVK*fisisfslftmhcshhylsyf*vhsiktpkrmty*tnh
isigfvnqnspfstwkfiwwvfigmwqsatiffvtffvmntstieggktlglwsigtaay
iylvvtvnlqisfitrywtrqtilavsisvvstflfvmlysvlgryveadathiifelya
lptfwllliiapsiallpyiivslnswlfntdnlslqklnlekkgfimrxfinknfkkkx
kkx

Homology Contig-U11253-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U11253-1 (Contig-U11253-1Q) /CSM_Contig/Conti...  4371  0.0
Contig-U04046-1 (Contig-U04046-1Q) /CSM_Contig/Conti...    48  8e-05
Contig-U03312-1 (Contig-U03312-1Q) /CSM_Contig/Conti...    48  8e-05
Contig-U13688-1 (Contig-U13688-1Q) /CSM_Contig/Conti...    46  3e-04
Contig-U11910-1 (Contig-U11910-1Q) /CSM_Contig/Conti...    46  3e-04
Contig-U05104-1 (Contig-U05104-1Q) /CSM_Contig/Conti...    46  3e-04
Contig-U13574-1 (Contig-U13574-1Q) /CSM_Contig/Conti...    44  0.001
Contig-U12737-1 (Contig-U12737-1Q) /CSM_Contig/Conti...    44  0.001
Contig-U12528-1 (Contig-U12528-1Q) /CSM_Contig/Conti...    44  0.001
Contig-U12011-1 (Contig-U12011-1Q) /CSM_Contig/Conti...    44  0.001

Homology Contig-U11253-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ345878) Dictyostelium discoideum cDNA clone:dda29j07, 3' ...  1344   0.0    1
(BJ352700) Dictyostelium discoideum cDNA clone:dda47i18, 3' ...  1267   0.0    1
(BJ401091) Dictyostelium discoideum cDNA clone:dds22i05, 3' ...  1263   0.0    1
(BJ379522) Dictyostelium discoideum cDNA clone:ddc35j04, 3' ...  1257   0.0    1
(BJ378602) Dictyostelium discoideum cDNA clone:ddc32b11, 3' ...  1225   0.0    1
(BJ403646) Dictyostelium discoideum cDNA clone:dds25f22, 3' ...  1217   0.0    1
(BJ398966) Dictyostelium discoideum cDNA clone:dds3k12, 3' e...  1181   0.0    1
(BJ377898) Dictyostelium discoideum cDNA clone:ddc26h09, 3' ...  1179   0.0    2
(BJ365371) Dictyostelium discoideum cDNA clone:ddc35j04, 5' ...  1160   0.0    1
(BJ400717) Dictyostelium discoideum cDNA clone:dds14p07, 3' ...  1094   0.0    5

Homology Contig-U11253-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


CU928168_86(CU928168|pid:none) Kluyveromyces thermotolerans stra...   319   e-123
(O94296) RecName: Full=Probable phospholipid-transporting ATPase...   312   e-120
CR380953_263(CR380953|pid:none) Candida glabrata strain CBS138 c...   310   e-118
(Q29449) RecName: Full=Probable phospholipid-transporting ATPase...   339   e-118
BC109318_1(BC109318|pid:none) Homo sapiens ATPase, aminophosphol...   338   e-118
FM992690_676(FM992690|pid:none) Candida dubliniensis CD36 chromo...   313   e-117
AK220560_1(AK220560|pid:none) Mus musculus mRNA for mKIAA4233 pr...   337   e-116
(P70704) RecName: Full=Probable phospholipid-transporting ATPase...   337   e-116
BC094235_1(BC094235|pid:none) Mus musculus ATPase, aminophosphol...   337   e-116
FN392322_688(FN392322|pid:none) Pichia pastoris GS115 chromosome...   318   e-115