Dictyostelium discoideum cDNA Contig-U11251-1

Assembled

Chromosomal Location of Contig-U11251-1

NO HIT FOUND.

Sequence Contig-U11251-1

TAGTAATAAT AATAATAATA ATAATAGTAA TTCAAATATA ATTACAAGTA
ATGGAACAGT AATACCACAA TTAGTTTTTA AAAATGAACC AACAGGAGGA
AGATTAAGAT CATTTACATT GGATGCTGAT CATATTAGTC CAGGTAGAGA
ATTAGTTTCA ACTGGTTCAT CTGATGAAAT TCTTTATTTC AATAGTGAAG
GTGGTTGTGA AAATTCAGAT TCTGACGAAC CAATCCAACC TCTAAGTGCA
GGAAGATCAA GAGCTCAAAC TATTAGTGGA AAACAACCAT CAATTATCAA
TAATAATAAT AATAATAATA GTGGTGGTGG TAGTGGTAAT AATAATAATA
GTGGTGGTGG TGGTGGTTCT AGAAAAGCAT TCCAAAATTT AATTAAAAGT
GCAAAACAAA TTGGTTCAAA TATAAAGAAT AAAACTCATC ATATTAATGG
TCATTCAAGT AGTAGTCAAT CAATTCAACA ACAAATACAC CTTCAATAAG
TTCAACACCA TACCCAACAT CAACAATTAA AACTAATGTT TCAGATACAA
ATACACCTGT AAATTATAAT GGACAACAAC AAATATCAAA AGTTATTCAA
AGAGTTAGTG GTGAAATAGA TCCACTTTAT TCAGGTATTG ACTCACCAAG
AACATTGGAA AGAAGAAATA GTTCAAGAGA TGATATTCCA ATTAGTCCAC
CACAAGGCTG TATGACACCA ATTAAAAGAT TAGGTTCAGT TGAGGGCGAT
GAAATTTCTG CTATTTTCTC ATCATCCACT GATGCAAATA TGGATGTTAG
TCAAGACTAT TCTTCATCAA CACCAACTGT TAATTCAATG TCTTATCAAT
CTTCATTTTT AGATACATTT GATAATCAAT CAACTGTTGG TTCTCCAACT
TTCTATCAAT TACCAGTTTC ATCGCAACCA CCTCAACATC CACCTCCTCC
ACCACCAATA AAAGATAATA ATCAACCTAA ATTAAATCAA TCTCAAAATT
TAATTAATAC AAATTCAAAT AGTGTTACTA CAACCAATAA TAGTAGTCAA
ACAACTACAA CTACCACCAC TACAACAACA AATAATAATA ATGTTTTAAA
TTTAGAAAAA TTACATAAAT TAGATTTTGC TGAAGATATA AATGGTGATG
AAAGATGTTC AAATCCACTT TATTCAAAAA AGAAATTAGC AGGCTTATTA
TTCCCAAATA AACATCATCA ACCATCAGCA TTGAAAACTG CAAAAATAAG
ATTTAAGAGT TCAAAGAGAT TAGCTACAAC TGTTAATTCA AATTCTTCCA
ATAATTTAAT GATGTCAAAT TCACCTTTGT CATCGTCATC AATGAATTTA
TTACAACAAT CAAATTCACC ---------- AAAAGAATAT TACTTTAAAA
ATGTTAACCT CTTTATTAAC TCATGAAAAA GGTCAAAGTA ATGAATTAAA
TGGTATTTTC TTTGATACTT ATCTTTTATT CACATCAATT CCATTAGTAA
TCGAACATTT GGAATCAAGA TTTTTAAATG GTAAAAATCA TATTGTAAAA
CAAAAGGTTA TAACATTTTC ACAAAAATGG GTTGAAGTTT GTTGGTCAGA
TTTTAAAGAA GAACATATTG AATTATTATT AAAATTTTTA AATGATTGTT
CAGAACAAAT TGAAAAATTA GTAACAGGAT CATTTGCATT AAGAACATCA
TTAAATTTAT TATTAAATAT TATAAATATG AAAAGAGATG GAACTTATAT
CACAGAAGAG GAAGAAACAT TTGAACAACC AGCACCAATT CCAGATTTTA
TTCAATTACC AAATTGTGTT GATATAAATT TAATGGATTT AAGACCTCAC
GAAATTGCTA GACAATTAAC AATACTAGAT CATGAATTAT TAACTCAAAT
TACAAAGCAA CAAATGTTAG ATTATGCAGT TCATCAAACA AATTCACCTT
CAATAGTTAA AGTTACTGAT AGATTTAATT ATTTAGTACT TTGGGTTTCA
ACTGAAATAG TTTTAAGTTT AACAATTGAA AAAAGAATTG AAACAATATT
TAAATTTGTT AATATTGCAT TGAATTGTTG GTATTTAAAA AACTTTAATA
GTGCAATTGC AATTATAGCA GCAATGAGTA AACCATCAAT TGAGAAATTA
AAACAAACAT GGGGTTTCAT TAGAAATACA AAAGCAAATG CACCAATTCA
AGAGTTAAAA GAATTAATTT TACCAACAAA TGTTGCAAGA CTTAGAAAGA
TTATGGACTC AGTTGAAGCT CCTTTCATTC CTTATTTGGG TGCATACTTT
AGTCATTCAA TAGCAATTCA TGCAGGTAAT AAATCAATTG TAAATGAACA
ATATATTAAT ATGCAAAAAT ATGATATGAT GGGGAAAATC ATTAGATCAA
TTACTGTTGC TCAAGAAAAG AAATATAATT TAACACCAGT TGGTGTATTA
CAAAAGTTTT TAACAGATTC TTTTGTTCTT ACAGAGAAAC AATTATATTC
TGAAGCTTCA AAGATTGAAG AAAAAGGTGA TTCTTATATT ACAGAAACAA
CTAAATTTGG TTCAATTTTT AAAAAAAAAG ATAAATAAAT AATTTTAAAT
TATTTAANAT ATTAAAAATA AATTAAAAAA TAAATAAATA AAA

Translated Amino Acid Sequence Contig-U11251-1

**********fkynyk*wnsnttisf*k*tnrrkikiiyigc*sy*sr*risfnwfi**n
slfq**rwl*kfrf*rtnptskcrkikssny*wkttinyq*******www*w*****www
wwf*ksipkfn*kcktnwfkyke*nssy*wsfk**SINSTTNTPSISSTPYPTSTIKTNV
SDTNTPVNYNGQQQISKVIQRVSGEIDPLYSGIDSPRTLERRNSSRDDIPISPPQGCMTP
IKRLGSVEGDEISAIFSSSTDANMDVSQDYSSSTPTVNSMSYQSSFLDTFDNQSTVGSPT
FYQLPVSSQPPQHPPPPPPIKDNNQPKLNQSQNLINTNSNSVTTTNNSSQTTTTTTTTTT
NNNNVLNLEKLHKLDFAEDINGDERCSNPLYSKKKLAGLLFPNKHHQPSALKTAKIRFKS
SKRLATTVNSNSSNNLMMSNSPLSSSSMNLLQQSNS---

---KNITLKMLTSLLTHEKGQSNELNGIFFDTYLLFTSIPLVIEHLESRFLNGKNHIVKQ
KVITFSQKWVEVCWSDFKEEHIELLLKFLNDCSEQIEKLVTGSFALRTSLNLLLNIINMK
RDGTYITEEEETFEQPAPIPDFIQLPNCVDINLMDLRPHEIARQLTILDHELLTQITKQQ
MLDYAVHQTNSPSIVKVTDRFNYLVLWVSTEIVLSLTIEKRIETIFKFVNIALNCWYLKN
FNSAIAIIAAMSKPSIEKLKQTWGFIRNTKANAPIQELKELILPTNVARLRKIMDSVEAP
FIPYLGAYFSHSIAIHAGNKSIVNEQYINMQKYDMMGKIIRSITVAQEKKYNLTPVGVLQ
KFLTDSFVLTEKQLYSEASKIEEKGDSYITETTKFGSIFKKKDK*iilnylxy*k*ikk*
ink

Homology Contig-U11251-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U11251-1 (Contig-U11251-1Q) /CSM_Contig/Conti...  4294  0.0
Contig-U02846-1 (Contig-U02846-1Q) /CSM_Contig/Conti...    54  8e-07
Contig-U01257-1 (Contig-U01257-1Q) /CSM_Contig/Conti...    52  3e-06
Contig-U08943-1 (Contig-U08943-1Q) /CSM_Contig/Conti...    50  1e-05
Contig-U13001-1 (Contig-U13001-1Q) /CSM_Contig/Conti...    48  5e-05
Contig-U11802-1 (Contig-U11802-1Q) /CSM_Contig/Conti...    48  5e-05
Contig-U10720-1 (Contig-U10720-1Q) /CSM_Contig/Conti...    48  5e-05
Contig-U12425-1 (Contig-U12425-1Q) /CSM_Contig/Conti...    46  2e-04
Contig-U01253-1 (Contig-U01253-1Q) /CSM_Contig/Conti...    46  2e-04
Contig-U13982-1 (Contig-U13982-1Q) /CSM_Contig/Conti...    44  8e-04

Homology Contig-U11251-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ349629) Dictyostelium discoideum cDNA clone:dda37j06, 3' ...  1368   0.0    1
(BJ349371) Dictyostelium discoideum cDNA clone:dda36d12, 3' ...  1348   0.0    1
(BJ372789) Dictyostelium discoideum cDNA clone:ddc14l03, 3' ...  1271   0.0    2
(BJ403450) Dictyostelium discoideum cDNA clone:dds25m03, 3' ...  1211   0.0    1
(BJ359377) Dictyostelium discoideum cDNA clone:ddc14l03, 5' ...  1142   0.0    1
(AY160103) Dictyostelium discoideum nucleotide exchange fact...  1025   0.0    6
(BJ332079) Dictyostelium discoideum cDNA clone:dda37j06, 5' ...   692   0.0    2
(BJ331595) Dictyostelium discoideum cDNA clone:dda36d12, 5' ...  1005   0.0    1
(BJ391778) Dictyostelium discoideum cDNA clone:dds25m03, 5' ...   507   0.0    3
(GR571687) CBTG2126.g1 CBTG Dictyostelium purpureum 12 hr ve...   143   9e-80  6

Homology Contig-U11251-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


AC117080_21(AC117080|pid:none) Dictyostelium discoideum chromoso...   793   0.0
AY160103_1(AY160103|pid:none) Dictyostelium discoideum nucleotid...   793   0.0
AC117082_5(AC117082|pid:none) Dictyostelium discoideum chromosom...   124   2e-26
AM920436_178(AM920436|pid:none) Penicillium chrysogenum Wisconsi...   123   3e-26
U53884_1(U53884|pid:none) Dictyostelium discoideum aimless RasGE...   122   9e-26
AY160090_1(AY160090|pid:none) Dictyostelium discoideum nucleotid...   122   9e-26
AY160099_1(AY160099|pid:none) Dictyostelium discoideum nucleotid...   120   2e-25
AY160098_1(AY160098|pid:none) Dictyostelium discoideum nucleotid...   117   2e-24
AY160105_1(AY160105|pid:none) Dictyostelium discoideum nucleotid...   115   8e-24
AY254473_1(AY254473|pid:none) Dictyostelium discoideum nucleotid...   115   8e-24