Dictyostelium discoideum cDNA Contig-U11229-1

Assembled

Chromosomal Location of Contig-U11229-1

Sequence Contig-U11229-1

GAAAAAGAAA TCAATTAAAC AATACATTTC GCAATATTTA TTATAATTGT
AATATTACGT TAACAAAAGA TAAAGTAGAG GGAAATAAAG GATATAAATA
GAAAAAGAAG GAGAAGAAGT GGTGCGTAGT TAAATTATTA TTATAATTTT
ATATTATAAT AAGAAGATAA TTTATTTATT GGTCATAATA ATTTTACTTT
TAATATAATA ACTTTTATAA TTAAAAAAAA AA-------- --ACTGTTGG
CCTACTGGTT ATCATTGCAT TTTGTTCTTT CTTTATTATA TTTACAATTA
CTGCATCATT AGCCACAAAA GTTATTTCAG AGCAAATTAT ATATTCAAAT
ATTAAATTAC CAGGTAATGT TATACCAATT CATTATTTTA CACATGTCGA
TATTAGAATG GAACCAAAAT TTAATTTCAA TGGTACAATT GTTTCAACAT
TGAATATTAC AAGCGATAAA AATGATTTTA TTGTGATTCA TGCAGATGAA
AGCACATTAT CATTAAATAG TATTCACTTA GTATCAGTAC CAAAATATAA
TAGTTCAAAA CCGGTCAATA GTACCGATTT CGATTTGGAG TCATCTATCA
CTCCAACAAA TAAAGTCTAT AGTCCCGAAA ATAGCTATTA CATCTTATTT
TTTAAGGATT TGAAAAAGTT TTTAGATAAA AATGGAAGTA TTTTTAATTT
ATATATTAGT TATAATGGAT CATTAGTTGA TTCAGAAGGT ACGAGTACAT
TAAGAGGATT ATATTTATCA TCATATAAGA ATCCAAGTAA TCATAGTGAA
TCAAAGTATT TAGCAGTAAC ACAATTTGAA CCAGTTGATG CAAGATTATC
ATTTCCATGT TTTGATGAAC CATCATTGAA AGCCAATTGG ACAATTTGGA
TTACACATCC AAATAATTAT AAAGCACTCT CAAATATGCC AGCCTATTTA
GTGGAAGATA ATAAGGTAGC CCATAAAACA ACCACTCGAT TCGATACTAC
CCCAAAGATG AGTAGTTATT TGGTTTGTAT TGTAGTTCAT CAATTTAGTA
GTAAATCCGA TTTCATTGAC CGTAGAGGTA AAGAAGGTGC AACCTCTGTT
CCATTGACAG TTTGGGCCGC CGATCATTTA ATGGATACCG TTGATTTTTC
ATTGGATATG GCAAAGAAAT CATTTGTATT CTTTGAAGAT TATTTTGATA
TTCTTTATCC ATTACCAAAG ATGGATCTTG TAGCTATACC TGATTTCGCT
GCGGGTGCAA TGGAGAATTT TGGTTTAATG ACATTTAGAG AATTCCGATC
TACTATATAG TAATAAAACT TCAGATCAAG AGAATAAACA AAGAGTGGCA
GAAGTGGTTT CACATGAGAT TGCTCATCAA TGGTTTGGTG ATTTGGTCAC
AATGAAATGG TGGAATGATC TTTGGTTAAA TGAAGGTTTT GCAACTTTTA
TGTCCTACAA GTGTATGCAA AAGGTATTGA TTGATGAATT CGATAGTGAA
GAGATCTTTC AATATAGTTC AAAACAACCT GGTCTAGATA TTGATGCTTC
ACCATTCACT CATACAATCT CAAATAATTA CACTGATCCA TTGGATATTA
TGGCTTCATT CGATAGTGTA ACCTATGATA AAGGTTCTTC AATTCTATTG
ATGTTGGAGG CAATGATTGA TAGAGTTAAA GAGAATGCTT TTCGTGATGG
TATTAGAAAC TATTTGAAAA AGTATGCCTA TGGAAATGCT GAAACCAATG
ATCTTTGGGA AATGTTGTAT GACTCGATTG CACGTGACCC AATTATGGTA
ATACCTGACA TTATGAATCA ATGGACAACT TATCCAGGTT TTCCACAAAT
TAAAATCGAT TCAATCGGTA ACAATTCATA TCGTATCACT CAATCTAAAT
TCACTCAACC AAATACAACT CGTCCAAAGG GGATTTCAAT GCAAACTCTA
TTTGGTGGAT GCCAATTAAA GTCATTGACA ATTGTGAAAA CACTGATGAC
CTTTACATCT CCAATAAATC CATTCAATAT AAGGGTTGGA GTGATCAAGC
TTGTGGTACC CCAGCAAAGG ATAGTTTTAT ATTTGCAAAC TCTGATGCCA
CTGGTTTCTA TCGTACCCTC TATGATAGCT CAATCTTTGA TAAGATTGTA
AATAGACTCA ATGAGAATGC CACTGAACAT TTCACAACTC TACAAAGAAT
TTCTTTTGCT GATGATCTCT ATGCATTCTC AAAGATTGGT GCAATTCCAA
CTTCTGTAGC TTTGAAAACT TTTTACTATA CCACCGTCTC TGTTGAACCA
AATTTCGTAG TTTGGAAAGA TATCCTAAGT TTCCTTTCAT TTGTTCACAA
TCGTTTAGAA ACCGTTGTTC CATGTTATAT TCAATACATT AAAAAAGCTC
AATACATTTT CAATAAAGGC TTATTACCAC TCATCAAACT TAATATTACT
TCGGATGATG AACTCTCCCT ATAATCAATT GGAATTAAGA AAATCTGCCT
TTTCAAAAGT AAACTCCTTA TCAATTACTT CTTTAAGAAT TCATCTTAAT
CAAATTTATT TAGATAATAT TGATACACCA GAAAATATTG ATCCATCAAT
TAGAGCTCCA TTATTCTCAT CAATTATACA AAATGGTGAT ATTGAAGAAT
ATGAATGGGT AGTTAATAGA TTTGAAAATA CAAATGCAAT CAATGAAAGA
ATCGATGCTT TGAAAGCAAT TTCCAATCCA AAGAATCCAC AATTAATTAG
AAATACTTTA AAAATGCTTT TAGATGGTAA AATTAAAAGT CAAGACTTTT
ATATGGTTTT CTTGGAAATG TCATATTCAC CATTTGCAAG AGAATTAGCT
TGGAACTTTT TATTAGATAA TTTTAATTTC ATTTCAGAGA ATTCAACACC
AGGTGATATT GGTAAATATG TAACCTATTT TGCATCATCA ATGGATTCCC
AAGCAAAAAT TGATCAAATT AAACAATTTT TCACAGATGC TCATCCAATC
CCAGCCTCTT CGTTGGCAAA TGCTATATCA AGTATTCAAT ACAATATGAA
TTGGTTAAAA AACCAAGCAC CTGAACTTTG TAATTTTTTA AATAAATAAT
TATAATTTTA ATAATTATAA ATTCTATTTT TCTTTTTTTA TTTAGTTTAA
AAAAAAAAAA

Translated Amino Acid Sequence Contig-U11229-1

ekein*tihfaifiiivilr*qkik*reikdinrkrrrrsga*lnyyynfil**EDNLFI
GHNNFTFNIITFIIKKK---

---TVGLLVIIAFCSFFIIFTITASLATKVISEQIIYSNIKLPGNVIPIHYFTHVDIRME
PKFNFNGTIVSTLNITSDKNDFIVIHADESTLSLNSIHLVSVPKYNSSKPVNSTDFDLES
SITPTNKVYSPENSYYILFFKDLKKFLDKNGSIFNLYISYNGSLVDSEGTSTLRGLYLSS
YKNPSNHSESKYLAVTQFEPVDARLSFPCFDEPSLKANWTIWITHPNNYKALSNMPAYLV
EDNKVAHKTTTRFDTTPKMSSYLVCIVVHQFSSKSDFIDRRGKEGATSVPLTVWAADHLM
DTVDFSLDMAKKSFVFFEDYFDILYPLPKMDLVAIPDFAAGAMENFGLMTFREFRSTI**
*nfrsre*tksgrsgft*dcssmvw*fghnemve*slvk*rfcnfyvlqvyakgid**ir
**rdlsi*fkttwsry*cftihsynlk*lh*sigyygfir*cnl**rffnsidvggnd**
s*recfs*wy*klfekvclwkc*nq*slgnvv*ldct*pnygnt*hyesmdnlsrfstn*
nrfnr*qfisyhsi*ihstkynsskgdfnansiwwmpikvidncentddlyisnksiqyk
gwsdqacgtpakdsfifansdatgfyrtlydssifdkivnrlnenatehfttlqrisfad
dlyafskigaiptsvalktfyyttvsvepnfvvwkdilsflsfvhnrletvvpcyiqyik
kaqyifnkgllpliklnitsddelsl*sigikkiclfkskllinyffknss*snlfr*y*
ytrky*sin*ssiilinytkw*y*ri*mgs**i*kykcnq*knrcfesnfqskestin*k
yfknafrw*n*ksrllygflgnviftickrislelfir*f*fhfrefntr*yw*icnlfc
iingfpskn*sn*tifhrcssnpslfvgkcyikysiqyelvkkpst*tl*ffk*iiiili
iinsiflflfslkkk

Homology Contig-U11229-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U11229-1 (Contig-U11229-1Q) /CSM_Contig/Conti...  5626  0.0
Contig-U12946-1 (Contig-U12946-1Q) /CSM_Contig/Conti...   858  0.0
Contig-U12971-1 (Contig-U12971-1Q) /CSM_Contig/Conti...   700  0.0
Contig-U13929-1 (Contig-U13929-1Q) /CSM_Contig/Conti...    40  0.014
Contig-U12779-1 (Contig-U12779-1Q) /CSM_Contig/Conti...    40  0.014
Contig-U11454-1 (Contig-U11454-1Q) /CSM_Contig/Conti...    40  0.014
Contig-U10325-1 (Contig-U10325-1Q) /CSM_Contig/Conti...    40  0.014
Contig-U09655-1 (Contig-U09655-1Q) /CSM_Contig/Conti...    40  0.014
Contig-U06826-1 (Contig-U06826-1Q) /CSM_Contig/Conti...    40  0.014
Contig-U04510-1 (Contig-U04510-1Q) /CSM_Contig/Conti...    40  0.014

Homology Contig-U11229-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ386458) Dictyostelium discoideum cDNA clone:ddc58f12, 3' ...  1413   0.0    2
(BJ405390) Dictyostelium discoideum cDNA clone:dds31c18, 3' ...  1411   0.0    2
(BJ380899) Dictyostelium discoideum cDNA clone:ddc39n15, 3' ...  1409   0.0    2
(BJ385462) Dictyostelium discoideum cDNA clone:ddc55e03, 3' ...  1403   0.0    2
(BJ353917) Dictyostelium discoideum cDNA clone:dda51k24, 3' ...  1352   0.0    2
(BJ408995) Dictyostelium discoideum cDNA clone:dds47m14, 3' ...  1296   0.0    1
(BJ370692) Dictyostelium discoideum cDNA clone:ddc55e03, 5' ...  1160   0.0    2
(BJ332195) Dictyostelium discoideum cDNA clone:dda38d12, 5' ...  1160   0.0    2
(BJ400581) Dictyostelium discoideum cDNA clone:dds13i23, 3' ...  1148   0.0    3
(BJ385219) Dictyostelium discoideum cDNA clone:ddc54a07, 3' ...  1148   0.0    3

Homology Contig-U11229-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


CR559943_8(CR559943|pid:none) Zebrafish DNA sequence from clone ...   176   2e-88
(P50123) RecName: Full=Glutamyl aminopeptidase;          EC=3.4....   171   1e-83
AF146044_1(AF146044|pid:none) Rattus norvegicus aminopeptidase A...   170   2e-83
AK143746_1(AK143746|pid:none) Mus musculus 6 days neonate spleen...   141   6e-82
(P97449) RecName: Full=Aminopeptidase N;          Short=mAPN;   ...   141   6e-82
(P15144) RecName: Full=Aminopeptidase N;          Short=hAPN;   ...   140   5e-81
AB462940_1(AB462940|pid:none) Synthetic construct DNA, clone: pF...   140   8e-81
AM920433_347(AM920433|pid:none) Penicillium chrysogenum Wisconsi...   162   2e-79
AP007157_574(AP007157|pid:none) Aspergillus oryzae RIB40 genomic...   163   2e-78
AE014297_4535(AE014297|pid:none) Drosophila melanogaster chromos...   153   4e-78