<Clone: Contig-U11214-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>

Dictyostelium discoideum cDNA Contig-U11214-1

Dictyostelium discoideum cDNA Project Home

Assembled

Chromosomal Location of Contig-U11214-1

< more Chromosomal info >

Chromosome Number 1
Length 4919822
Start Poin 3,816,744
End Point 3,817,642
Strand PLUS

Sequence Contig-U11214-1

TTGGCCTACT GGAAAATTTT ACAACAGTTA TACCGCACAA AAAAAAAATA
ATATAGAATT AATAAAGAAA AATTAAATGT TTAAATAACA AATACAAATA
CATATCAATA ATTAATAATA ATAATAATAA CAATAATAAA AATAATAATA
ATATTAGTGA AATCATAAAT TTAAATTAAA TATAATATTC AAATAATAAA
TAATAATTAA TTAATTAAAA AAAAAA---- ------TTAT TNTGCTGCTT
TTGGAAAGTC TCAAATCCTT TTTTTCCTTC TCAATGAATG TGCTGTTGAT
TTATATTGTA GAGATGATTT TAATGAAACT GCCCTTCATT ATGCCACTAG
AGAACAACAT TTAAATTGTA TAGAAATTTT ATTATCACAT GCTTTCAATA
AGGAGAGTGA TTCAACAACA ACAACATCAA CAACAAATGA ATATGATAAT
ATTTTACATT ATTTATCATC AAGTAAACGT TATAATTTTA ATCACAATGA
TCATGAAGAT AACGTTCCTC AAGATGATGA AGACTTTGAT GAAGATGATG
AAAATAGTAA TGAACCATTT CATTTATTAA AAAATGAAGA TGGTGGAACA
TCATTCCATC TTTNTTTACT AAATAATTTA AATAACTCTA TNAATAACTN
TAATAATAAC AAAATCATTG ATACCTTTTT AAAATATAAT TCAAAATTCC
AAGATAAAAT TAATAATTCA AAAAATTTAA ACAAAACAGA ACAATCTTTN
AATAATAATC ATAATAATAA TAATAGCTCA ATTNTAAAAA TAATATCAAC
TTTTAATCAT ATTCATAATA ATAATAATAA TAATAATAAT AATAATAATA
ATAATAATAA TAGTAATAAT AATTTACTTC AAGTAAATAT ANAAAATTAA
ATAAAAAAAA AATAAATAAA

Translated Amino Acid Sequence Contig-U11214-1

<All Frames> 
laywkilqqlyrtkkk*yrinkeklnv*itntntyq*liiiiitiikiiiilvks*i*ik
yniqiinnn*LIKKK---

---YXAAFGKSQILFFLLNECAVDLYCRDDFNETALHYATREQHLNCIEILLSHAFNKES
DSTTTTSTTNEYDNILHYLSSSKRYNFNHNDHEDNVPQDDEDFDEDDENSNEPFHLLKNE
DGGTSFHLXLLNNLNNSXNNXNNNKIIDTFLKYNSKFQDKINNSKNLNKTEQSXNNNHNN
NNSSIXKIISTFNHIHNNNNNNNNNNNNNNNSNNNLLQVNIXN*ikkk*i


Homology Contig-U11214-1 vs CSM-Contig

<more CONTIG info> 
Sequences producing significant alignments:                        (bits)  Value


Contig-U11214-1 (Contig-U11214-1Q) /CSM_Contig/Conti...   450  e-126
Contig-U09574-1 (Contig-U09574-1Q) /CSM_Contig/Conti...    44  3e-04
Contig-U14741-1 (Contig-U14741-1Q) /CSM_Contig/Conti...    40  0.004
Contig-U13956-1 (Contig-U13956-1Q) /CSM_Contig/Conti...    40  0.004
Contig-U09320-1 (Contig-U09320-1Q) /CSM_Contig/Conti...    40  0.004
Contig-U01095-1 (Contig-U01095-1Q) /CSM_Contig/Conti...    40  0.004
Contig-U12461-1 (Contig-U12461-1Q) /CSM_Contig/Conti...    38  0.016
Contig-U09216-1 (Contig-U09216-1Q) /CSM_Contig/Conti...    38  0.016
Contig-U06662-1 (Contig-U06662-1Q) /CSM_Contig/Conti...    38  0.016
Contig-U01835-1 (Contig-U01835-1Q) /CSM_Contig/Conti...    38  0.016


Homology Contig-U11214-1 vs DNA

<more DNA info> 
Sequences producing significant alignments:                  (bits) Value  N


(BJ348744) Dictyostelium discoideum cDNA clone:dda34p04, 3' ...   373   0.0    3
(BJ405319) Dictyostelium discoideum cDNA clone:dds31e11, 3' ...   355   e-176  3
(BJ383203) Dictyostelium discoideum cDNA clone:ddc52p02, 3' ...   375   e-170  2
(BJ407678) Dictyostelium discoideum cDNA clone:dds43e10, 3' ...   363   e-165  4
(BJ408297) Dictyostelium discoideum cDNA clone:dds45i09, 3' ...   428   e-146  3
(BJ358093) Dictyostelium discoideum cDNA clone:dda65a20, 3' ...   359   e-129  2
(BJ393431) Dictyostelium discoideum cDNA clone:dds31e11, 5' ...    76   3e-09  1
(DY936288) CHPX2393.b1_A23.ab1 CHP(XYZ) plains sunflower Hel...    62   4e-05  1
(FH519497) CHO_OF4716xl19f1.ab1 CHO_OF4 Nicotiana tabacum ge...    54   0.010  1
(FG345564) SF_11-h03 Bv_T50 Beta vulgaris subsp. vulgaris cD...    54   0.010  1


Homology Contig-U11214-1 vs Protein

<more Protein info> 
Sequences producing significant alignments:                      (bits) Value


CP001102_1320(CP001102|pid:none) Candidatus Amoebophilus asiatic...    39   0.24
AM920431_945(AM920431|pid:none) Penicillium chrysogenum Wisconsi...    39   0.32
CU640366_464(CU640366|pid:none) Podospora anserina genomic DNA c...    39   0.32
AB478516_58(AB478516|pid:none) Wolbachia endosymbiont of Cadra c...    38   0.42
BC148423_1(BC148423|pid:none) Synthetic construct Homo sapiens c...    38   0.55
AP007164_39(AP007164|pid:none) Aspergillus oryzae RIB40 genomic ...    38   0.55
AC079887_7(AC079887|pid:none) Oryza sativa (japonica cultivar-gr...    38   0.55
BT058910_1(BT058910|pid:none) Salmo salar clone ssal-rgf-512-322...    37   0.71
(Q9VUX2) RecName: Full=E3 ubiquitin-protein ligase mind-bomb;   ...    37   0.71
BT070956_1(BT070956|pid:none) Picea sitchensis clone WS02761_M20...    37   0.93


<Clone: Contig-U11214-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>

Dictyostelium discoideum cDNA Project Home