Homology Contig-U11200-1 vs Protein
Query= Contig-U11200-1 (Contig-U11200-1Q) /CSM_Contig/Contig-U11200-1Q.Seq.d
(1874 letters)
Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
(Q8I7T3) RecName: Full=Substrate-adhesion molecule; Flags: Precu... 51 1e-04
AL110498_8(AL110498|pid:none) Caenorhabditis elegans YAC Y64G10A... 49 8e-04
AC115598_37(AC115598|pid:none) Dictyostelium discoideum chromoso... 46 0.005
T27283(T27283)hypothetical protein Y64G10A.f - Caenorhabditis el... 44 0.015
AC116956_34(AC116956|pid:none) Dictyostelium discoideum chromoso... 44 0.026
CR954216_234(CR954216|pid:none) Ostreococcus tauri strain OTTH05... 43 0.034
DQ311330_1(DQ311330|pid:none) Bombyx mori Wnt inhibitory factor ... 43 0.034
BC142880_1(BC142880|pid:none) Danio rerio similar to alpha-2-mac... 43 0.045
U77586_1(U77586|pid:none) Strongylocentrotus purpuratus integrin... 42 0.077
T22759(T22759)hypothetical protein F55H12.3 - Caenorhabditis ele... 41 0.13
AK074062_1(AK074062|pid:none) Homo sapiens mRNA for FLJ00133 pro... 41 0.13
BC169202_1(BC169202|pid:none) Synthetic construct Homo sapiens c... 41 0.13
AC116963_42(AC116963|pid:none) Dictyostelium discoideum chromoso... 40 0.22
(P10079) RecName: Full=Fibropellin-1; AltName: Full=Fibropellin-... 40 0.22
AF315556_1(AF315556|pid:none) Caenorhabditis remanei notch-like ... 40 0.29
DQ786775_1(DQ786775|pid:none) Mus musculus FEX2 mRNA, complete c... 40 0.29
AF308652_1(AF308652|pid:none) Podocoryne carnea integrin beta ch... 40 0.38
AC116920_20(AC116920|pid:none) Dictyostelium discoideum chromoso... 40 0.38
AK148084_1(AK148084|pid:none) Mus musculus B16 F10Y cells cDNA, ... 39 0.50
AC116960_61(AC116960|pid:none) Dictyostelium discoideum chromoso... 39 0.65
X56811_1(X56811|pid:none) D.melanogaster Serrate mRNA for EGF-li... 39 0.65
(P18168) RecName: Full=Serrate protein; AltName: Full=Protein be... 39 0.65
FJ222590_1(FJ222590|pid:none) Periplaneta americana Delta protei... 39 0.65
BC145886_1(BC145886|pid:none) Mus musculus sushi, nidogen and EG... 39 0.65
BC020198_1(BC020198|pid:none) Homo sapiens multiple EGF-like-dom... 39 0.65
AY128478_1(AY128478|pid:none) Drosophila melanogaster RE42104 fu... 39 0.65
(Q70E20) RecName: Full=Sushi, nidogen and EGF-like domain-contai... 39 0.65
AB098194_1(AB098194|pid:none) Codonosiga gracilis CgPTK-f mRNA f... 39 0.65
S16148(S16148;S16878;A36666)gene serrate protein precursor - fru... 39 0.65
(Q96KG7) RecName: Full=Multiple epidermal growth factor-like dom... 39 0.65
AY173044_1(AY173044|pid:none) Oncorhynchus mykiss latent transfo... 39 0.65
AE014297_4255(AE014297|pid:none) Drosophila melanogaster chromos... 39 0.65
CR749437_1(CR749437|pid:none) Homo sapiens mRNA; cDNA DKFZp781K1... 39 0.65
AL591496_16(AL591496|pid:none) Mouse DNA sequence from clone RP2... 39 0.85
AK074051_1(AK074051|pid:none) Homo sapiens mRNA for FLJ00122 pro... 39 0.85
AF463419_1(AF463419|pid:none) Naegleria gruberi basal body prote... 39 0.85
AJ295695_1(AJ295695|pid:none) Homo sapiens mRNA for stabilin-2 (... 39 0.85
EU685294_1(EU685294|pid:none) Branchiostoma lanceolatum notch re... 39 0.85
BX890618_1(BX890618|pid:none) Zebrafish DNA sequence from clone ... 39 0.85
AJ566620_1(AJ566620|pid:none) Paramecium tetraurelia macronuclea... 39 0.85
(Q8CFM6) RecName: Full=Stabilin-2; AltName: Full=Fasciclin, EGF-... 39 0.85
AB052958_1(AB052958|pid:none) Homo sapiens mRNA for FELE-2, comp... 39 0.85
AL591496_15(AL591496|pid:none) Mouse DNA sequence from clone RP2... 39 0.85
BX088690_1(BX088690|pid:none) Zebrafish DNA sequence from clone ... 39 0.85
(Q8WWQ8) RecName: Full=Stabilin-2; AltName: Full=Fasciclin, EGF-... 39 0.85
U00046_2(U00046|pid:none) Caenorhabditis elegans cosmid R13F6, c... 38 1.1
AB206835_1(AB206835|pid:none) Caenorhabditis elegans ten-1 mRNA ... 38 1.1
AC116967_8(AC116967|pid:none) Dictyostelium discoideum chromosom... 38 1.1
T16743(T16743)hypothetical protein R13F6.4 - Caenorhabditis eleg... 38 1.1
AF056116_15(AF056116|pid:none) Fugu rubripes serine/threonine ki... 38 1.1
U00046_1(U00046|pid:none) Caenorhabditis elegans cosmid R13F6, c... 38 1.1
AY074792_1(AY074792|pid:none) Strongylocentrotus purpuratus delt... 38 1.4
AM418386_1(AM418386|pid:none) Oncorhynchus mykiss mRNA for CD18 ... 38 1.4
AY280362_1(AY280362|pid:none) Homo sapiens EGF domain-containing... 37 1.9
AX647103_1(AX647103|pid:none) Sequence 1295 from Patent EP1270724. 37 1.9
AE014296_356(AE014296|pid:none) Drosophila melanogaster chromoso... 37 1.9
T00209(T00209)MEGF8 protein - human (fragment) 37 1.9
AF003521_1(AF003521|pid:none) Homo sapiens Jagged 2 mRNA, comple... 37 1.9
AB001327_1(AB001327|pid:none) Halocynthia roretzi mRNA for HrNot... 37 1.9
AF032672_1(AF032672|pid:none) Lucilia cuprina Notch homolog (Scl... 37 1.9
CP000595_188(CP000595|pid:none) Ostreococcus lucimarinus CCE9901... 37 1.9
AF029778_1(AF029778|pid:none) Homo sapiens Jagged2 (JAG2) mRNA, ... 37 1.9
AB011541_1(AB011541|pid:none) Homo sapiens mRNA for MEGF8, parti... 37 1.9
AF075240_1(AF075240|pid:none) Homo sapiens SLIT1 protein (SLIL2)... 37 1.9
BX649457_6(BX649457|pid:none) Zebrafish DNA sequence from clone ... 37 1.9
AF029779_1(AF029779|pid:none) Homo sapiens hJAG2.del-E6 (JAG2) m... 37 1.9
AF020201_1(AF020201|pid:none) Homo sapiens Jagged 2 mRNA, comple... 37 1.9
Y14330_1(Y14330|pid:none) Homo sapiens partial mRNA for jagged2 ... 37 1.9
AK122555_1(AK122555|pid:none) Mus musculus mRNA for mKIAA1781 pr... 37 2.5
(Q9WU60) RecName: Full=Attractin; AltName: Full=Protein mahogany... 37 2.5
(Q80T91) RecName: Full=Multiple epidermal growth factor-like dom... 37 2.5
DQ917572_1(DQ917572|pid:none) Parhyale hawaiensis notch protein ... 37 2.5
(Q9W6V6) RecName: Full=Teneurin-1; Short=Ten-1; AltName... 37 2.5
AE014297_1645(AE014297|pid:none) Drosophila melanogaster chromos... 37 2.5
BX537264_1(BX537264|pid:none) Zebrafish DNA sequence from clone ... 37 2.5
(Q54KF7) RecName: Full=Integrin beta-like protein A; AltName: Fu... 37 2.5
BC141054_1(BC141054|pid:none) Mus musculus attractin, mRNA (cDNA... 37 2.5
AL833771_1(AL833771|pid:none) Mouse DNA sequence from clone RP23... 37 2.5
AK051642_1(AK051642|pid:none) Mus musculus 12 days embryo spinal... 37 2.5
M33753_1(M33753|pid:none) D.melanogaster crumbs protein mRNA, co... 37 3.2
EU854565_1(EU854565|pid:none) Danio rerio fibrillin 4 (fbn4) mRN... 37 3.2
AF374536_1(AF374536|pid:none) Thalassiosira guillardii isolate C... 37 3.2
AF374535_1(AF374535|pid:none) Thalassiosira guillardii isolate C... 37 3.2
(P10040) RecName: Full=Protein crumbs; AltName: Full=95F; Flags:... 37 3.2
(Q9QYP0) RecName: Full=Multiple epidermal growth factor-like dom... 37 3.2
(Q8VIK5) RecName: Full=Platelet endothelial aggregation receptor... 37 3.2
AF461685_1(AF461685|pid:none) Mus musculus Jedi-736 protein mRNA... 37 3.2
BC036727_1(BC036727|pid:none) Mus musculus multiple EGF-like-dom... 37 3.2
BC168665_1(BC168665|pid:none) Rattus norvegicus platelet endothe... 37 3.2
AL032657_4(AL032657|pid:none) Caenorhabditis elegans YAC Y47H9C,... 37 3.2
AF444274_1(AF444274|pid:none) Mus musculus Jedi protein mRNA, co... 37 3.2
BC146386_1(BC146386|pid:none) Synthetic construct Homo sapiens c... 36 4.2
AK098809_1(AK098809|pid:none) Homo sapiens cDNA FLJ25943 fis, cl... 36 4.2
(P46530) RecName: Full=Neurogenic locus notch homolog protein 1;... 36 4.2
(O75095) RecName: Full=Multiple epidermal growth factor-like dom... 36 4.2
EU441156_1(EU441156|pid:none) Patiria miniata delta protein mRNA... 36 4.2
AL929049_5(AL929049|pid:none) Zebrafish DNA sequence from clone ... 36 4.2
CP001323_444(CP001323|pid:none) Micromonas sp. RCC299 chromosome... 36 4.2
DQ177286_1(DQ177286|pid:none) Danio rerio Slit1a (slit1a) mRNA, ... 36 4.2
AP007281_1480(AP007281|pid:none) Lactobacillus reuteri JCM 1112 ... 36 4.2
AE014296_355(AE014296|pid:none) Drosophila melanogaster chromoso... 36 4.2
DQ366718_23(DQ366718|pid:none) Uncultured Prochlorococcus marinu... 36 4.2
BX897725_5(BX897725|pid:none) Zebrafish DNA sequence from clone ... 36 4.2
AB011539_1(AB011539|pid:none) Homo sapiens mRNA for MEGF6 protei... 36 4.2
DQ917570_1(DQ917570|pid:none) Parhyale hawaiensis delta protein ... 36 4.2
BC117624_1(BC117624|pid:none) Danio rerio delta-like 4 (Drosophi... 36 4.2
AL627123_1(AL627123|pid:none) Mouse DNA sequence from clone RP23... 36 5.5
AB052948_1(AB052948|pid:none) Homo sapiens mRNA for SREC-3, comp... 36 5.5
AB052949_1(AB052949|pid:none) Homo sapiens mRNA for SREC-4, comp... 36 5.5
AX817295_1(AX817295|pid:none) Sequence 43 from Patent WO02081517. 36 5.5
BC163266_1(BC163266|pid:none) Danio rerio integrin beta 3a, mRNA... 36 5.5
AK291810_1(AK291810|pid:none) Homo sapiens cDNA FLJ78719 complet... 36 5.5
A56136(A56136)jagged protein precursor - rat 36 5.5
(Q80V70) RecName: Full=Multiple epidermal growth factor-like dom... 36 5.5
AX817297_1(AX817297|pid:none) Sequence 45 from Patent WO02081517. 36 5.5
(Q9NZR2) RecName: Full=Low-density lipoprotein receptor-related ... 36 5.5
AB209707_1(AB209707|pid:none) Homo sapiens mRNA for low density ... 36 5.5
AB058677_1(AB058677|pid:none) Homo sapiens mRNA for MEGF11 prote... 36 5.5
AB300051_1(AB300051|pid:none) Homo sapiens mRNA for MEGF11, comp... 36 5.5
(O73791) RecName: Full=Tyrosine-protein kinase receptor Tie-2; ... 36 5.5
U28741_1(U28741|pid:none) Caenorhabditis elegans cosmid F35D2, c... 36 5.5
(Q9NBW4) RecName: Full=Therostasin; Flags: Precursor; &AF239803... 36 5.5
BC125720_1(BC125720|pid:none) Xenopus tropicalis hypothetical pr... 36 5.5
AJ606469_1(AJ606469|pid:none) Suberites domuncula mRNA for epide... 36 5.5
U41027_6(U41027|pid:none) Caenorhabditis elegans cosmid R08E3, c... 36 5.5
D87558_1(D87558|pid:none) Gallus gallus mRNA for C-Serrate-2, pa... 36 5.5
DQ178647_1(DQ178647|pid:none) Danio rerio integrin beta 3.2 (itg... 36 5.5
BC172899_1(BC172899|pid:none) Synthetic construct Homo sapiens c... 36 5.5
AP007175_125(AP007175|pid:none) Aspergillus oryzae RIB40 genomic... 36 5.5
AC068195_1(AC068195|pid:none) Homo sapiens BAC clone RP11-114B24... 36 5.5
BC117419_1(BC117419|pid:none) Homo sapiens multiple EGF-like-dom... 36 5.5
T16271(T16271)hypothetical protein F35D2.3 - Caenorhabditis eleg... 36 5.5
AB052950_1(AB052950|pid:none) Homo sapiens mRNA for SREC-5, comp... 36 5.5
CP000482_1906(CP000482|pid:none) Pelobacter propionicus DSM 2379... 36 5.5
(Q01705) RecName: Full=Neurogenic locus notch homolog protein 1;... 36 5.5
(P13508) RecName: Full=Protein glp-1; Flags: Precursor; &A32901... 36 5.5
AK173032_1(AK173032|pid:none) Mus musculus mRNA for mKIAA0815 pr... 36 5.5
AL834326_1(AL834326|pid:none) Homo sapiens mRNA; cDNA DKFZp434L1... 36 5.5
AX647115_1(AX647115|pid:none) Sequence 1307 from Patent EP1270724. 36 5.5
Y12539_1(Y12539|pid:none) Branchiostoma floridae mRNA for putati... 35 7.2
AF483064_1(AF483064|pid:none) Boltenia villosa EGF repeat-contai... 35 7.2
AF499438_1(AF499438|pid:none) Caenorhabditis briggsae notch-like... 35 7.2
(O00548) RecName: Full=Delta-like protein 1; AltName: Full=Droso... 35 7.2
BC044262_1(BC044262|pid:none) Xenopus laevis similar to delta-li... 35 7.2
AF196571_1(AF196571|pid:none) Homo sapiens Delta-like-1 protein ... 35 7.2
AK122377_1(AK122377|pid:none) Mus musculus mRNA for mKIAA0817 pr... 35 7.2
AF003522_1(AF003522|pid:none) Homo sapiens Delta mRNA, complete ... 35 7.2
AB038388_1(AB038388|pid:none) Rattus norvegicus Atrn mRNA for at... 35 7.2
AM494965_257(AM494965|pid:none) Leishmania braziliensis chromoso... 35 7.2
CR388098_1(CR388098|pid:none) Zebrafish DNA sequence from clone ... 35 7.2
AC096673_18(AC096673|pid:none) Trypanosoma brucei chromosome 3 c... 35 7.2
BC089695_1(BC089695|pid:none) Xenopus tropicalis MGC107972 prote... 35 7.2
AB046104_1(AB046104|pid:none) Macaca fascicularis brain cDNA, cl... 35 7.2
AF145617_1(AF145617|pid:none) Drosophila melanogaster clone GH03... 35 7.2
AK132523_1(AK132523|pid:none) Mus musculus 10 days neonate skin ... 35 7.2
AC116920_24(AC116920|pid:none) Dictyostelium discoideum chromoso... 35 9.4
BX004856_1(BX004856|pid:none) Zebrafish DNA sequence from clone ... 35 9.4
AE014187_162(AE014187|pid:none) Plasmodium falciparum 3D7 chromo... 35 9.4
BC163556_1(BC163556|pid:none) Danio rerio tenascin C, mRNA (cDNA... 35 9.4
DQ096731_1(DQ096731|pid:none) Danio rerio tenascin-C (TNC) mRNA,... 35 9.4
AY812463_1(AY812463|pid:none) Schistosoma japonicum SJCHGC09372 ... 35 9.4
AY390351_1(AY390351|pid:none) Gallus gallus Schwann cell-specifi... 35 9.4
AY845260_1(AY845260|pid:none) Mytilus edulis clone 2 foot protei... 35 9.4
AB073215_1(AB073215|pid:none) Rattus norvegicus SLIT1 mRNA for S... 35 9.4
Z81110_2(Z81110|pid:none) Caenorhabditis elegans Cosmid T01D3, c... 35 9.4
DQ900934_1(DQ900934|pid:none) Ciona intestinalis gamma-carboxygl... 35 9.4
AC117075_41(AC117075|pid:none) Dictyostelium discoideum chromoso... 35 9.4
AF374537_1(AF374537|pid:none) Thalassiosira pseudonana isolate C... 35 9.4
AF008227_1(AF008227|pid:none) Drosophila melanogaster odd Oz pro... 35 9.4
AE014296_3877(AE014296|pid:none) Drosophila melanogaster chromos... 35 9.4
A54148(A54148)odz protein - fruit fly (Drosophila sp.) 35 9.4
M16152_1(M16152|pid:none) Drosophila melanogaster Notch growth f... 35 9.4
T22945(T22945;T24295)hypothetical protein T01D3.1 - Caenorhabdit... 35 9.4
AE014296_3878(AE014296|pid:none) Drosophila melanogaster chromos... 35 9.4
>(Q8I7T3) RecName: Full=Substrate-adhesion molecule; Flags: Precursor;
&AY178767_1(AY178767|pid:none)
Length = 952
Score = 51.2 bits (121), Expect = 1e-04
Identities = 32/94 (34%), Positives = 38/94 (40%), Gaps = 7/94 (7%)
Frame = +3
Query: 1344 GGCNYDVGLCKCHKS----NCRSVTVEVTGQCLNDDNG---DAYCSCNERWEGTLCEIGT 1502
G CNY G C C + C C DNG + +C C+ WEG CEI
Sbjct: 384 GECNY--GTCVCDHNYQGQGCEEELCLTLNNCTGTDNGKCENGFCYCSSEWEGAQCEIRR 441
Query: 1503 CFGYDGCNSPKGECDKATSMCHCLDKNFNNDYCN 1604
C D CN G C+ A C C D + CN
Sbjct: 442 C--KDSCNG-YGTCNTANYTCVC-DSAHMGETCN 471
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 2,529,287,409
Number of extensions: 46471408
Number of successful extensions: 128179
Number of sequences better than 10.0: 174
Number of HSP's gapped: 127050
Number of HSP's successfully gapped: 213
Length of query: 624
Length of database: 1,040,966,779
Length adjustment: 135
Effective length of query: 489
Effective length of database: 608,388,304
Effective search space: 297501880656
Effective search space used: 297501880656
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
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