Homology Contig-U11197-1 vs Protein

Query= Contig-U11197-1 (Contig-U11197-1Q) /CSM_Contig/Contig-U11197-1Q.Seq.d
         (1056 letters)

Database: nrp_A
           3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U81156_1(U81156|pid:none) Dictyostelium discoideum RasGAP1 (rgaA...   168   3e-40
AK302981_1(AK302981|pid:none) Homo sapiens cDNA FLJ52376 complet...    61   6e-08
(Q13576) RecName: Full=Ras GTPase-activating-like protein IQGAP2...    61   6e-08
AY351902_1(AY351902|pid:none) Homo sapiens testis specific IQ mo...    61   6e-08
AK303054_1(AK303054|pid:none) Homo sapiens cDNA FLJ50398 complet...    61   7e-08
AB105103_1(AB105103|pid:none) Homo sapiens IQGAP3 mRNA, complete...    60   1e-07
BC131536_1(BC131536|pid:none) Homo sapiens IQ motif containing G...    60   1e-07
AK122653_1(AK122653|pid:none) Homo sapiens cDNA FLJ16086 fis, cl...    60   1e-07
(Q86VI3) RecName: Full=Ras GTPase-activating-like protein IQGAP3...    60   1e-07
BC146242_1(BC146242|pid:none) Bos taurus IQ motif containing GTP...    56   2e-06
AK129044_1(AK129044|pid:none) Mus musculus mRNA for mKIAA0051 pr...    55   3e-06
BC169057_1(BC169057|pid:none) Rattus norvegicus IQ motif contain...    55   3e-06
AK029631_1(AK029631|pid:none) Mus musculus adult male testis cDN...    55   3e-06
D29640_1(D29640|pid:none) Homo sapiens KIAA0051 mRNA, partial cds.     54   9e-06
(P46940) RecName: Full=Ras GTPase-activating-like protein IQGAP1...    54   9e-06
AK077354_1(AK077354|pid:none) Mus musculus adult male pituitary ...    54   9e-06
BC139731_1(BC139731|pid:none) Homo sapiens IQ motif containing G...    54   9e-06
BC151102_1(BC151102|pid:none) Mus musculus IQ motif containing G...    53   2e-05
BC156520_1(BC156520|pid:none) Synthetic construct Mus musculus c...    53   2e-05
AK302510_1(AK302510|pid:none) Homo sapiens cDNA FLJ51769 partial...    53   2e-05
BC150958_1(BC150958|pid:none) Mus musculus IQ motif containing G...    50   1e-04
(Q3UQ44) RecName: Full=Ras GTPase-activating-like protein IQGAP2;      50   1e-04
AK298000_1(AK298000|pid:none) Homo sapiens cDNA FLJ55816 complet...    45   0.004
AB179106_1(AB179106|pid:none) Macaca fascicularis testis cDNA cl...    41   0.061
AB076897_1(AB076897|pid:none) Ciona intestinalis Ci-IQGAP mRNA f...    40   0.18
AY168005_1(AY168005|pid:none) Emericella nidulans Ras-GAP gene, ...    39   0.40
AM920427_1561(AM920427|pid:none) Penicillium chrysogenum Wiscons...    37   0.88
BC126305_1(BC126305|pid:none) Homo sapiens CAP-GLY domain contai...    36   2.0
FM992691_467(FM992691|pid:none) Candida dubliniensis CD36 chromo...    36   2.0
BC114213_1(BC114213|pid:none) Homo sapiens CAP-GLY domain contai...    36   2.0
CP000404_11(CP000404|pid:none) Borrelia afzelii PKo plasmid lp31...    36   2.6
CP001056_3220(CP001056|pid:none) Clostridium botulinum B str. Ek...    34   7.5

>U81156_1(U81156|pid:none) Dictyostelium discoideum RasGAP1 (rgaA)
            gene, complete cds.
          Length = 822

 Score =  168 bits (426), Expect = 3e-40
 Identities = 103/277 (37%), Positives = 151/277 (54%), Gaps = 7/277 (2%)
 Frame = +3

Query: 228  NDREIQLTLINRFKENIEKEISISASLLAETKELVISVLRSIPIXXXXXXXXHDDEKRDD 407
            +DRE+QLTL N+F++ IE+E+S   SLL++TKE+VIS+LR++P            ++  +
Sbjct: 554  DDREVQLTLSNKFQKTIEEELSPGESLLSQTKEMVISLLRALPTLPEQKD---QSDEPPN 610

Query: 408  LISILQNAIKHGKETNNPQLSSNAEKIINNLKKMEAEGSIQSENNQYEGFIKVIALEVIN 587
            L+ +L  A        +P L    +KI++NLKK+E E ++ +  + Y  F+K +ALEV+N
Sbjct: 611  LVDVLNKA-----RQADPSLEPEIKKILDNLKKLE-EYNLTTSADNYSSFLKAVALEVVN 664

Query: 588  XXXXXXXXXXXXXXLTIALRDLRKHQSYLNDQIQHYTSYLKDVLL-HYG------PXXXX 746
                          LT +L +LRKHQ YLN+QI  Y  YL+D  L HY
Sbjct: 665  RAEIREQQKKEKQRLTTSLNNLRKHQKYLNEQIAQYNQYLQDCRLKHYQNKSKKKKKGDG 724

Query: 747  XXXXXXXXXXXELTKKGVIVESDIPKLSHGSTSFYISSDAPGIFDIEARIGVASVGTXXX 926
                       EL KKGVIV+S++P+++     F ISSD  G+FD+ A++    V T
Sbjct: 725  AKVGPFKFSFSELHKKGVIVDSEVPQITRKKIKFVISSDTVGVFDVSAKMAGIDVQTMRL 784

Query: 927  XXXXXXXXXXAGIPYLKLENIVLDVNMTLHLLNRHFL 1037
                       G   L+L+ I LDVNMT+HLLN+ FL
Sbjct: 785  ELDDLLELNSIGTTTLELDQITLDVNMTIHLLNKLFL 821

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 1,242,280,650
Number of extensions: 22627040
Number of successful extensions: 42262
Number of sequences better than 10.0: 33
Number of HSP's gapped: 42246
Number of HSP's successfully gapped: 41
Length of query: 352
Length of database: 1,040,966,779
Length adjustment: 129
Effective length of query: 223
Effective length of database: 627,614,014
Effective search space: 139957925122
Effective search space used: 139957925122
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)