Dictyostelium discoideum cDNA Contig-U11197-1

Assembled

Chromosomal Location of Contig-U11197-1

Sequence Contig-U11197-1

GCCTACTGGA AAAAAATTTT ATTTTTATTT ATTTTATTTA TTTATTTATT
TATTTATTTT ATTTATTTAT TTATTTATTT ATTAATTTCT ATTTATTAAT
TTTTTTTTTT TTTTTTATAA AACCTTAAAA AAAAAAAAAA AAAACCCAAA
AAAAAAAACC CAAAANCNAA AAAAANNNAA AAAAANNCNN CNTTCCCCCN
AANCCCAAAA AAAAAA---- ------AAAT GATCGTGAAA TTCAATTAAC
TTTAATAAAT AGATTCAAAG AGAATATCGA AAAGGAGATT TCAATCTCTG
CATCATTATT GGCAGAGACA AAGGAATTGG TGATCTCTGT ATTAAGATCA
ATTCCAATTC AACAAAAACA ACAACAACAA CAACACGACG ACGAAAAAAG
AGATGATTTA ATATCAATAC TTCAAAATGC AATTAAACAT GGTAAAGAAA
CCAATAATCC ACAATTATCC TCAAATGCAG AGAAAATTAT AAATAATCTT
AAAAAGATGG AGGCCGAGGG TTCAATTCAA AGTGAAAATA ATCAATATGA
AGGTTTCATA AAGGTGATCG CTTTGGAGGT AATCAATCGT CAAGAGATTA
GAGAACAACA AAGAAAGGAG AGAATGCGTT TAACCATCGC TTTACGTGAT
CTTAGAAAAC ATCAATCCTA TTTGAATGAT CAAATTCAAC ATTATACCTC
TTATCTCAAG GATGTCCTCC TTCATTATGG TCCAAAGGAT AAGAAGAAAT
CAACTAAACC AATGAAAATC TCTTTCAAAG AATTAACAAA GAAAGGTGTA
ATCGTCGAAT CTGATATTCC AAAACTTTCT CATGGTTCTA CCTCTTTCTA
TATCTCTTCT GATGCTCCTG GTATCTTTGA TATTGAAGCT AGAATTGGTG
TTGCCTCTGT TGGTACTCTC TCACTTTCTT TAGATGATCT CTTGGACAAA
TCTTCTGCTG GTATTCCTTA TCTCAAACTT GAAAATATTG TTCTAGATGT
TAATATGACA CTTCATTTAT TAAACAGACA TTTCTTAAAA AATATTTAAA
AAAAAA

Translated Amino Acid Sequence Contig-U11197-1

ptgkkfyfylfylfiylfilfiylfiy*FLFINFFFFFYKTLKKKKKNPKKKTQXXKKXK
KXXXSPXXQKK---

---NDREIQLTLINRFKENIEKEISISASLLAETKELVISVLRSIPIQQKQQQQQHDDEK
RDDLISILQNAIKHGKETNNPQLSSNAEKIINNLKKMEAEGSIQSENNQYEGFIKVIALE
VINRQEIREQQRKERMRLTIALRDLRKHQSYLNDQIQHYTSYLKDVLLHYGPKDKKKSTK
PMKISFKELTKKGVIVESDIPKLSHGSTSFYISSDAPGIFDIEARIGVASVGTLSLSLDD
LLDKSSAGIPYLKLENIVLDVNMTLHLLNRHFLKNI*kk

Homology Contig-U11197-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U11197-1 (Contig-U11197-1Q) /CSM_Contig/Conti...  1312  0.0
Contig-U13855-1 (Contig-U13855-1Q) /CSM_Contig/Conti...    38  0.019
Contig-U01499-1 (Contig-U01499-1Q) /CSM_Contig/Conti...    36  0.075
Contig-U13726-1 (Contig-U13726-1Q) /CSM_Contig/Conti...    34  0.29
Contig-U13197-1 (Contig-U13197-1Q) /CSM_Contig/Conti...    34  0.29
Contig-U12089-1 (Contig-U12089-1Q) /CSM_Contig/Conti...    34  0.29
Contig-U11444-1 (Contig-U11444-1Q) /CSM_Contig/Conti...    34  0.29
Contig-U10950-1 (Contig-U10950-1Q) /CSM_Contig/Conti...    34  0.29
Contig-U10772-1 (Contig-U10772-1Q) /CSM_Contig/Conti...    34  0.29
Contig-U09510-1 (Contig-U09510-1Q) /CSM_Contig/Conti...    34  0.29

Homology Contig-U11197-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(D88027) Dictyostelium discoideum gene for GAPA, complete cds.   1312   0.0    2
(C92665) Dictyostelium discoideum slug cDNA, clone SSF806.       1312   0.0    2
(BJ436981) Dictyostelium discoideum cDNA clone:ddv32g20, 3' ...  1203   0.0    2
(BJ357644) Dictyostelium discoideum cDNA clone:dda64b07, 3' ...  1203   0.0    2
(BJ355309) Dictyostelium discoideum cDNA clone:dda56k12, 3' ...  1195   0.0    2
(BJ407092) Dictyostelium discoideum cDNA clone:dds37o10, 3' ...  1193   0.0    2
(BJ352001) Dictyostelium discoideum cDNA clone:dda45f11, 3' ...  1193   0.0    3
(BJ437326) Dictyostelium discoideum cDNA clone:ddv33m19, 3' ...  1183   0.0    1
(BJ350064) Dictyostelium discoideum cDNA clone:dda38g18, 3' ...  1183   0.0    1
(BJ349094) Dictyostelium discoideum cDNA clone:dda35i12, 3' ...  1181   0.0    1

Homology Contig-U11197-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


U81156_1(U81156|pid:none) Dictyostelium discoideum RasGAP1 (rgaA...   168   3e-40
AK302981_1(AK302981|pid:none) Homo sapiens cDNA FLJ52376 complet...    61   6e-08
(Q13576) RecName: Full=Ras GTPase-activating-like protein IQGAP2...    61   6e-08
AY351902_1(AY351902|pid:none) Homo sapiens testis specific IQ mo...    61   6e-08
AK303054_1(AK303054|pid:none) Homo sapiens cDNA FLJ50398 complet...    61   7e-08
AB105103_1(AB105103|pid:none) Homo sapiens IQGAP3 mRNA, complete...    60   1e-07
BC131536_1(BC131536|pid:none) Homo sapiens IQ motif containing G...    60   1e-07
AK122653_1(AK122653|pid:none) Homo sapiens cDNA FLJ16086 fis, cl...    60   1e-07
(Q86VI3) RecName: Full=Ras GTPase-activating-like protein IQGAP3...    60   1e-07
BC146242_1(BC146242|pid:none) Bos taurus IQ motif containing GTP...    56   2e-06