Homology Contig-U11185-1 vs Protein

Query= Contig-U11185-1 (Contig-U11185-1Q) /CSM_Contig/Contig-U11185-1Q.Seq.d
         (961 letters)

Database: nrp_A
           3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CP000033_1307(CP000033|pid:none) Lactobacillus acidophilus NCFM,...    37   0.76
CR628394_1(CR628394|pid:none) Zebrafish DNA sequence from clone ...    36   1.7
BX248360_3(BX248360|pid:none) Corynebacterium diphtheriae gravis...    36   1.7
BC151483_1(BC151483|pid:none) Bos taurus activating transcriptio...    36   2.2
AK074868_1(AK074868|pid:none) Homo sapiens cDNA FLJ90387 fis, cl...    36   2.2
AK001550_1(AK001550|pid:none) Homo sapiens cDNA FLJ10688 fis, cl...    36   2.2
AJ242978_1(AJ242978|pid:none) Homo sapiens partial mRNA for puta...    36   2.2
AE017349_52(AE017349|pid:none) Cryptococcus neoformans var. neof...    36   2.2
(Q6VMQ6) RecName: Full=Activating transcription factor 7-interac...    36   2.2
AF425650_1(AF425650|pid:none) Homo sapiens MBD1-containing chrom...    36   2.2
T45025(T45025) mucin MUC5B, tracheobronchial [imported] - human ...    35   2.9
(Q00PJ1) Cortactin-binding protein 2 (CortBP2).                        35   2.9
(Q7M4S5) RecName: Full=Mucin-5B;          Short=MUC-5B; AltName:...    35   2.9
(Q5D7I2) RecName: Full=Tripartite motif-containing protein 5;   ...    35   2.9
CR382127_435(CR382127|pid:none) Yarrowia lipolytica strain CLIB1...    35   3.8
AM502242_111(AM502242|pid:none) Leishmania infantum chromosome 24.     35   3.8
(Q5D7H8) RecName: Full=Tripartite motif-containing protein 5;   ...    35   3.8
AP007151_1385(AP007151|pid:none) Aspergillus oryzae RIB40 genomi...    35   5.0
AF542529_21(AF542529|pid:none) Cryptococcus neoformans var. grub...    35   5.0
AE013599_3465(AE013599|pid:none) Drosophila melanogaster chromos...    35   5.0
AL732562_2(AL732562|pid:none) Zebrafish DNA sequence from clone ...    35   5.0
(Q84N48) RecName: Full=CRS2-associated factor 2, chloroplastic; ...    34   6.5
FN357608_4(FN357608|pid:none) Schistosoma mansoni genome sequenc...    34   6.5
AM502253_408(AM502253|pid:none) Leishmania infantum chromosome 35.     34   8.4
AM910990_89(AM910990|pid:none) Plasmodium knowlesi strain H chro...    34   8.4

>CP000033_1307(CP000033|pid:none) Lactobacillus acidophilus NCFM,
            complete genome.
          Length = 4326

 Score = 37.4 bits (85), Expect = 0.76
 Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
 Frame = +3

Query: 372  NVLHTTVEVSRSPNHERAHTVGPMTSKRPISNNNGVSSN----TPPLPNNVTP 518
            N LH TV V+ +PN     T  P  S  P   N  V  N    TP +P+NVTP
Sbjct: 4163 NDLHKTVTVTYTPNVPAVPTPTPTPSPEPKPENTPVEPNTPTPTPDIPDNVTP 4215

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 1,002,386,099
Number of extensions: 17356080
Number of successful extensions: 57891
Number of sequences better than 10.0: 25
Number of HSP's gapped: 57550
Number of HSP's successfully gapped: 25
Length of query: 320
Length of database: 1,040,966,779
Length adjustment: 128
Effective length of query: 192
Effective length of database: 630,818,299
Effective search space: 121117113408
Effective search space used: 121117113408
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)