Dictyostelium discoideum cDNA Contig-U11185-1

Assembled

Chromosomal Location of Contig-U11185-1

Sequence Contig-U11185-1

AATATTTATT TATTAATCTT GTATTTATTA ATATTGTATT TTATTTATCT
CATTATTTAT TTATTTATTT ATTTATTTAT TATTTATTTA TTATTACAAA
AAAAAACAAA AACAAAAAAA AAAACCAAAA NNAAAA---- ------TTTT
TCAGATCATT CGCNTTTGAA CTATTACCAA TTAATTCCTT TATGATTGTA
AATTATTTCG ATATATTTGA CCCAGAGAAT AAACCAATTT CAAGTGATAA
TAGTGGTGAT GCTGATACCG ATTCAACTCA ATCAACTTGC ACAACCAACA
ACAATAATTT AGTAGCCACT TCTCTAAGTT CACCAATTTC ACCATCTACC
ACTCCCACCA AATCAATTGA TAATGTTTTA CATACTACTG TTGAAGTTTC
AAGATCACCA AATCATGAAA GAGCTCACAC CGTTGGTCCA ATGACTTCAA
AGAGACCAAT TTCAAATAAT AATGGTGTCA GTTCTAATAC TCCACCACTA
CCAAATAATG TTACACCACA TCATAATACT ATGCCATCTA GACCATCAGC
TTCACCAATT AAAAGACCAC CATCAATGGG TGGATCATTA TCAAATTTTG
CTGGTATTCC ATTATCTAAT CATTCTTCAA GTGGTCAATT AAACAACAAC
AATAGTAATA ATAATACTAC TTCAAACTCT TCAAATTCTT CATCTGGTAA
AAGTTCAAGT AATCCAAGTC CAATTCCAAC ACCACCAGAT TCACCAAGTA
TGTCTTATAT TGGTGATGGT AAATCAACTT TAAGAAGTAA AAGATTTAGT
AGAGTTAATC GTGTTTCCTA TTCACCTGTT TTACCTCGTG CTTGGACAAA
TGAATCTAGA ACAGTTTCTT CTTTATTCCA AGATGATTTA GATTCAAATA
GTGATTCTTC AGGTCCAAGT TTATAAAATT AATAATTAAT CAAAAATAAT
AAAAAATAAA A

Translated Amino Acid Sequence Contig-U11185-1

NIYLLILYLLILYFIYLIIYLFIYLFIIYLLLQKKTKTKKKTKXK---

---FFRSFAFELLPINSFMIVNYFDIFDPENKPISSDNSGDADTDSTQSTCTTNNNNLVA
TSLSSPISPSTTPTKSIDNVLHTTVEVSRSPNHERAHTVGPMTSKRPISNNNGVSSNTPP
LPNNVTPHHNTMPSRPSASPIKRPPSMGGSLSNFAGIPLSNHSSSGQLNNNNSNNNTTSN
SSNSSSGKSSSNPSPIPTPPDSPSMSYIGDGKSTLRSKRFSRVNRVSYSPVLPRAWTNES
RTVSSLFQDDLDSNSDSSGPSL*n**liknnkk*

Homology Contig-U11185-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U11185-1 (Contig-U11185-1Q) /CSM_Contig/Conti...  1532  0.0
Contig-U12147-1 (Contig-U12147-1Q) /CSM_Contig/Conti...    52  1e-06
Contig-U14762-1 (Contig-U14762-1Q) /CSM_Contig/Conti...    46  7e-05
Contig-U14477-1 (Contig-U14477-1Q) /CSM_Contig/Conti...    44  3e-04
Contig-U04312-1 (Contig-U04312-1Q) /CSM_Contig/Conti...    44  3e-04
Contig-U14805-1 (Contig-U14805-1Q) /CSM_Contig/Conti...    42  0.001
Contig-U14596-1 (Contig-U14596-1Q) /CSM_Contig/Conti...    42  0.001
Contig-U14192-1 (Contig-U14192-1Q) /CSM_Contig/Conti...    42  0.001
Contig-U13900-1 (Contig-U13900-1Q) /CSM_Contig/Conti...    42  0.001
Contig-U12784-1 (Contig-U12784-1Q) /CSM_Contig/Conti...    42  0.001

Homology Contig-U11185-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ441304) Dictyostelium discoideum cDNA clone:ddv46e12, 3' ...  1532   0.0    1
(BJ408192) Dictyostelium discoideum cDNA clone:dds45c02, 3' ...  1392   0.0    2
(BJ406450) Dictyostelium discoideum cDNA clone:dds35e08, 3' ...  1374   0.0    2
(BJ351321) Dictyostelium discoideum cDNA clone:dda42e19, 3' ...  1342   0.0    1
(BJ348530) Dictyostelium discoideum cDNA clone:dda33d15, 3' ...  1340   0.0    2
(BJ349396) Dictyostelium discoideum cDNA clone:dda36j07, 3' ...  1314   0.0    3
(BJ354600) Dictyostelium discoideum cDNA clone:dda54l03, 3' ...  1162   0.0    1
(BJ379672) Dictyostelium discoideum cDNA clone:ddc35j13, 3' ...  1138   0.0    1
(BJ354553) Dictyostelium discoideum cDNA clone:dda54b02, 3' ...  1084   0.0    2
(BJ409525) Dictyostelium discoideum cDNA clone:dds42l11, 3' ...  1082   0.0    1

Homology Contig-U11185-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


CP000033_1307(CP000033|pid:none) Lactobacillus acidophilus NCFM,...    37   0.76
CR628394_1(CR628394|pid:none) Zebrafish DNA sequence from clone ...    36   1.7
BX248360_3(BX248360|pid:none) Corynebacterium diphtheriae gravis...    36   1.7
BC151483_1(BC151483|pid:none) Bos taurus activating transcriptio...    36   2.2
AK074868_1(AK074868|pid:none) Homo sapiens cDNA FLJ90387 fis, cl...    36   2.2
AK001550_1(AK001550|pid:none) Homo sapiens cDNA FLJ10688 fis, cl...    36   2.2
AJ242978_1(AJ242978|pid:none) Homo sapiens partial mRNA for puta...    36   2.2
AE017349_52(AE017349|pid:none) Cryptococcus neoformans var. neof...    36   2.2
(Q6VMQ6) RecName: Full=Activating transcription factor 7-interac...    36   2.2
AF425650_1(AF425650|pid:none) Homo sapiens MBD1-containing chrom...    36   2.2