Homology Contig-U11163-1 vs Protein
Query= Contig-U11163-1 (Contig-U11163-1Q) /CSM_Contig/Contig-U11163-1Q.Seq.d
(3664 letters)
Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC116977_32(AC116977|pid:none) Dictyostelium discoideum chromoso... 782 0.0
AF027728_1(AF027728|pid:none) Xenopus laevis kinesin-related pro... 44 0.043
CP001107_1897(CP001107|pid:none) Eubacterium rectale ATCC 33656,... 40 0.63
CP000123_229(CP000123|pid:none) Mycoplasma capricolum subsp. cap... 39 1.1
AM270339_8(AM270339|pid:none) Aspergillus niger contig An15c0120... 39 1.1
AE010300_1308(AE010300|pid:none) Leptospira interrogans serovar ... 39 1.4
AE016823_2343(AE016823|pid:none) Leptospira interrogans serovar ... 39 1.4
CP000806_3293(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 39 1.8
CP000348_1780(CP000348|pid:none) Leptospira borgpetersenii serov... 39 1.8
AF503772_9(AF503772|pid:none) Enterococcus faecalis plasmid pAMa... 39 1.8
AE001439_1066(AE001439|pid:none) Helicobacter pylori J99, comple... 39 1.8
DQ973816_1(DQ973816|pid:none) Plasmodium coatneyi reticulocyte-b... 39 1.8
CP000350_912(CP000350|pid:none) Leptospira borgpetersenii serova... 39 1.8
CP001146_1446(CP001146|pid:none) Dictyoglomus thermophilum H-6-1... 39 1.8
(Q21952) RecName: Full=Kinetochore protein Nuf2 homolog; ... 38 2.4
CP000393_1301(CP000393|pid:none) Trichodesmium erythraeum IMS101... 38 3.1
AY567966_1(AY567966|pid:none) Arabidopsis thaliana structural ma... 38 3.1
FM992691_96(FM992691|pid:none) Candida dubliniensis CD36 chromos... 38 3.1
(Q65NQ9) RecName: Full=Peptidoglycan DL-endopeptidase cwlO; ... 38 3.1
(P40767) RecName: Full=Peptidoglycan DL-endopeptidase cwlO; ... 38 3.1
FN392322_300(FN392322|pid:none) Pichia pastoris GS115 chromosome... 37 4.1
CP001037_4584(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 37 4.1
(Q4ULZ7) RecName: Full=Enoyl-[acyl-carrier-protein] reductase [N... 37 4.1
AM946634_1(AM946634|pid:none) Helicobacter pylori ORF1 DNA for h... 37 4.1
CP000890_571(CP000890|pid:none) Coxiella burnetii RSA 331, compl... 37 4.1
CP000812_407(CP000812|pid:none) Thermotoga lettingae TMO, comple... 37 5.3
(O97237) RecName: Full=GRIP and coiled-coil domain-containing pr... 37 5.3
CP001227_109(CP001227|pid:none) Rickettsia peacockii str. Rustic... 37 5.3
CP000733_1382(CP000733|pid:none) Coxiella burnetii Dugway 5J108-... 37 5.3
CP000001_249(CP000001|pid:none) Bacillus cereus E33L, complete g... 37 5.3
AM494949_53(AM494949|pid:none) Leishmania braziliensis chromosom... 37 5.3
CR926135_2(CR926135|pid:none) Zebrafish DNA sequence from clone ... 37 5.3
(Q9VJI3) RecName: Full=Myosin heavy chain, muscle; 37 6.9
M61229_2(M61229|pid:none) D.melanogaster myosin heavy chain gene... 37 6.9
A32491(A32491)myosin heavy chain 1, muscle - fruit fly (Drosophi... 37 6.9
D35815(D35815)myosin heavy chain 4, muscle - fruit fly (Drosophi... 37 6.9
CU466930_1507(CU466930|pid:none) Candidatus Cloacamonas acidamin... 37 6.9
AE014134_2868(AE014134|pid:none) Drosophila melanogaster chromos... 37 6.9
AE014134_2866(AE014134|pid:none) Drosophila melanogaster chromos... 37 6.9
X53155_4(X53155|pid:none) Drosophila melanogaster MHC gene, exon... 37 6.9
AE014134_2865(AE014134|pid:none) Drosophila melanogaster chromos... 37 6.9
FN357673_11(FN357673|pid:none) Schistosoma mansoni genome sequen... 37 6.9
AE014134_2859(AE014134|pid:none) Drosophila melanogaster chromos... 37 6.9
CP001140_925(CP001140|pid:none) Desulfurococcus kamchatkensis 12... 37 6.9
AE014134_2860(AE014134|pid:none) Drosophila melanogaster chromos... 37 6.9
B35815(B35815) myosin heavy chain 2, muscle - fruit fly (Drosoph... 37 6.9
BT056315_1(BT056315|pid:none) Drosophila melanogaster RH59876 fu... 37 6.9
AE014134_2857(AE014134|pid:none) Drosophila melanogaster chromos... 37 6.9
AC150444_8(AC150444|pid:none) Medicago truncatula clone mth2-101... 36 9.0
BC095200_1(BC095200|pid:none) Danio rerio calcium binding and co... 36 9.0
AY501889_1(AY501889|pid:none) Plasmodium vivax strain Thailand-N... 36 9.0
AM920428_122(AM920428|pid:none) Penicillium chrysogenum Wisconsi... 36 9.0
(Q00798) RecName: Full=Reticulocyte-binding protein 1; Flags: Pr... 36 9.0
D42167_1(D42167|pid:none) Ciona intestinalis mRNA for myoplasmin... 36 9.0
(P58301) RecName: Full=DNA double-strand break repair rad50 ATPa... 36 9.0
CP000413_755(CP000413|pid:none) Lactobacillus gasseri ATCC 33323... 36 9.0
AF325839_1(AF325839|pid:none) Streptococcus pyogenes M protein p... 36 9.0
AY823088_1(AY823088|pid:none) Borrelia hermsii isolate FRO P-553... 36 9.0
AY501884_1(AY501884|pid:none) Plasmodium vivax strain Salvador I... 36 9.0
AM422018_797(AM422018|pid:none) Candidatus Phytoplasma australie... 36 9.0
AL445065_133(AL445065|pid:none) Thermoplasma acidophilum complet... 36 9.0
AY692277_1(AY692277|pid:none) Borrelia hermsii P-553 gene, compl... 36 9.0
CR382121_10(CR382121|pid:none) Kluyveromyces lactis strain NRRL ... 36 9.0
FN357846_1(FN357846|pid:none) Schistosoma mansoni genome sequenc... 36 9.0
BA000023_2280(BA000023|pid:none) Sulfolobus tokodaii str. 7 DNA,... 36 9.0
AM910995_58(AM910995|pid:none) Plasmodium knowlesi strain H chro... 36 9.0
A42771(A42771)reticulocyte-binding protein 1 - Plasmodium vivax 36 9.0
>AC116977_32(AC116977|pid:none) Dictyostelium discoideum chromosome 2
map 5515173-5817331 strain AX4, complete sequence.
Length = 2284
Score = 782 bits (2020), Expect(2) = 0.0
Identities = 391/413 (94%), Positives = 391/413 (94%)
Frame = +2
Query: 1139 TYLPHFYVFVNDKDGNICRLPSKKPVSTITNSTQTTGRGRKPKQQVQQASAMAENPPFYI 1318
TYLPHFYVFVNDKDGNICRLPSKKPVSTITNSTQTTGRGRKPKQQVQQASAMAENPPFYI
Sbjct: 1124 TYLPHFYVFVNDKDGNICRLPSKKPVSTITNSTQTTGRGRKPKQQVQQASAMAENPPFYI 1183
Query: 1319 MVRSDSFDESIYYVCDEKGCFSLCTYTISGITKNPRVTPPPTAILIHEKVEKDFEPDEPX 1498
MVRSDSFDESIYYVCDEKGCFSLCTYTISGITKNPRVTPPPTAILIHEKVEKDFEPDEP
Sbjct: 1184 MVRSDSFDESIYYVCDEKGCFSLCTYTISGITKNPRVTPPPTAILIHEKVEKDFEPDEPT 1243
Query: 1499 XXXXXXXXXXXXXXXXXXXXXNSYSIATISFTLFKDMNELFTVSQKIKILPSFKPSYITL 1678
NSYSIATISFTLFKDMNELFTVSQKIKILPSFKPSYITL
Sbjct: 1244 TTITTTQSKNKKKQQQQQQEQNSYSIATISFTLFKDMNELFTVSQKIKILPSFKPSYITL 1303
Query: 1679 HPLTDIIEVDKDSFTTQASAEIKFGIKILSAGGGNRGPFLLNGLIGSVQPGWSPKTLDFQ 1858
HPLTDIIEVDKDSFTTQASAEIKFGIKILSAGGGNRGPFLLNGLIGSVQPGWSPKTLDFQ
Sbjct: 1304 HPLTDIIEVDKDSFTTQASAEIKFGIKILSAGGGNRGPFLLNGLIGSVQPGWSPKTLDFQ 1363
Query: 1859 MNSTASDSIATGSMVILPTIVADRNTRFNRYNVSVDIPLGKQTVKQFSLMAENKDHIITL 2038
MNSTASDSIATGSMVILPTIVADRNTRFNRYNVSVDIPLGKQTVKQFSLMAENKDHIITL
Sbjct: 1364 MNSTASDSIATGSMVILPTIVADRNTRFNRYNVSVDIPLGKQTVKQFSLMAENKDHIITL 1423
Query: 2039 KKDFTIQTVGGAPSYFVCNLGRGVGAARCDSEITLEIGLNDRRHNPVAPSNLKSTKPIEP 2218
KKDFTIQTVGGAPSYFVCNLGRGVGAARCDSEITLEIGLNDRRHNPVAPSNLKSTKPIEP
Sbjct: 1424 KKDFTIQTVGGAPSYFVCNLGRGVGAARCDSEITLEIGLNDRRHNPVAPSNLKSTKPIEP 1483
Query: 2219 FFELSYQQGYSSQIPCFIKSQSVGEFDVDKNIYPCKVTVVGFGKLNIKVIDKS 2377
FFELSYQQGYSSQIPCFIKSQSVGEFDVDKNIYPCKVTVVGFGKLNIKVIDKS
Sbjct: 1484 FFELSYQQGYSSQIPCFIKSQSVGEFDVDKNIYPCKVTVVGFGKLNIKVIDKS 1536
Score = 686 bits (1769), Expect(2) = 0.0
Identities = 353/388 (90%), Positives = 353/388 (90%)
Frame = +1
Query: 1 YFIGRPDYRASDFYVEIDKLHYKQIPTESFLCSKISKKFSKNEYITLIQACKKRLPSKIK 180
YFIGRPDYRASDFYVEIDKLHYKQIPTESFLCSKISKKFSKNEYITLIQACKKRLPSKIK
Sbjct: 745 YFIGRPDYRASDFYVEIDKLHYKQIPTESFLCSKISKKFSKNEYITLIQACKKRLPSKIK 804
Query: 181 FFEGDKANLPKEVYLAGEKIKWVSCTLMDSQNPPKEVERKIIEEESYKIMFSVIYQPTGE 360
FFEGDKANLPKEVYLAGEKIKWVSCTLMDSQNPPKEVERKIIEEESYKIMFSVIYQPTGE
Sbjct: 805 FFEGDKANLPKEVYLAGEKIKWVSCTLMDSQNPPKEVERKIIEEESYKIMFSVIYQPTGE 864
Query: 361 NVHKMETSVFYDSSRVSFGDIDCFKRTGTYSLIFECNDKSVKKATHFVSVVAGKPTSIKA 540
NVHKMETSVFYDSSRVSFGDIDCFKRTGTYSLIFECNDKSVKKATHFVSVVAGKPTSIKA
Sbjct: 865 NVHKMETSVFYDSSRVSFGDIDCFKRTGTYSLIFECNDKSVKKATHFVSVVAGKPTSIKA 924
Query: 541 TLEGIEDIKSLKVQIGQQLPPLLISLIDNDSNLVSINQIPKKLQFKAFSLXXXXXXXXXS 720
TLEGIEDIKSLKVQIGQQLPPLLISLIDNDSNLVSINQIPKKLQFKAFSL S
Sbjct: 925 TLEGIEDIKSLKVQIGQQLPPLLISLIDNDSNLVSINQIPKKLQFKAFSLDDDENEDNDS 984
Query: 721 QTLSSSPPQDKDDKMDTDEXXXXXXXXXXXXXXXXXXXGIGLIGGKEITLSKSNITSELV 900
QTLSSSPPQDKDDKMDTDE GIGLIGGKEITLSKSNITSELV
Sbjct: 985 QTLSSSPPQDKDDKMDTDEINNNSNSNSSNNNNNINSNGIGLIGGKEITLSKSNITSELV 1044
Query: 901 NNQIIVKGLVLPKAELNDESELLVTIQIVMDEFKLRIQPFTLISGEPVTMTFTEQLTFID 1080
NNQIIVKGLVLPKAELNDESELLVTIQIVMDEFKLRIQPFTLISGEPVTMTFTEQLTFID
Sbjct: 1045 NNQIIVKGLVLPKAELNDESELLVTIQIVMDEFKLRIQPFTLISGEPVTMTFTEQLTFID 1104
Query: 1081 SPKGQLKPNVDELDGYMNLDLFTSFLCF 1164
SPKGQLKPNVDELDGYMNL F F
Sbjct: 1105 SPKGQLKPNVDELDGYMNLTYLPHFYVF 1132
Score = 341 bits (874), Expect(3) = 0.0
Identities = 167/167 (100%), Positives = 167/167 (100%)
Frame = +3
Query: 3096 DIQTYDGAPTAGFVGFVVNKVQLREKHEFLRPTLCFTLFKEMMIFNTLKQAMEYKNFAAQ 3275
DIQTYDGAPTAGFVGFVVNKVQLREKHEFLRPTLCFTLFKEMMIFNTLKQAMEYKNFAAQ
Sbjct: 2116 DIQTYDGAPTAGFVGFVVNKVQLREKHEFLRPTLCFTLFKEMMIFNTLKQAMEYKNFAAQ 2175
Query: 3276 RKFLSPPIICLENGEYLDSSGFVEIGRVPNSRNWHQNLGQLPPNETPEFAQLKAKKNVLE 3455
RKFLSPPIICLENGEYLDSSGFVEIGRVPNSRNWHQNLGQLPPNETPEFAQLKAKKNVLE
Sbjct: 2176 RKFLSPPIICLENGEYLDSSGFVEIGRVPNSRNWHQNLGQLPPNETPEFAQLKAKKNVLE 2235
Query: 3456 EYRIIKHKMHSNKKGAEVQDYMNKIDGLKQQKKEKSAQLLQVTNEIS 3596
EYRIIKHKMHSNKKGAEVQDYMNKIDGLKQQKKEKSAQLLQVTNEIS
Sbjct: 2236 EYRIIKHKMHSNKKGAEVQDYMNKIDGLKQQKKEKSAQLLQVTNEIS 2282
Score = 338 bits (868), Expect(3) = 0.0
Identities = 175/193 (90%), Positives = 175/193 (90%)
Frame = +2
Query: 2459 FMQNQKESLDKKVKLQQQRVILGNEISDIDKELEELKQQQSKILNEYTNSKHQADEIFNH 2638
F QNQKESLDKKVKLQQQRVILGNEISDIDKELEELKQQQSKILNEYTNSKHQADEIFNH
Sbjct: 1904 FYQNQKESLDKKVKLQQQRVILGNEISDIDKELEELKQQQSKILNEYTNSKHQADEIFNH 1963
Query: 2639 LSSLIPNLNPEAKTNPETIKKLISQTTQEIEELXXXXXXXXXXXXXXXXXELFEIQRSTN 2818
LSSLIPNLNPEAKTNPETIKKLISQTTQEIEEL ELFEIQRSTN
Sbjct: 1964 LSSLIPNLNPEAKTNPETIKKLISQTTQEIEELTNSNRRRPPYPNNPTSRELFEIQRSTN 2023
Query: 2819 DSGIVGVIMDLFFVDDERLGQCLANFLKSKMEGVVFQNKQTFSHYYDRYSSKSVQPVFFV 2998
DSGIVGVIMDLFFVDDERLGQCLANFLKSKMEGVVFQNKQTFSHYYDRYSSKSVQPVFFV
Sbjct: 2024 DSGIVGVIMDLFFVDDERLGQCLANFLKSKMEGVVFQNKQTFSHYYDRYSSKSVQPVFFV 2083
Query: 2999 SLDTLIPFTPKKR 3037
SLDTLIPFTPKKR
Sbjct: 2084 SLDTLIPFTPKKR 2096
Score = 42.7 bits (99), Expect(3) = 0.0
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +1
Query: 2410 PHIPSIPTIEPLRIEFFY 2463
PHIPSIPTIEPLRIEFFY
Sbjct: 1888 PHIPSIPTIEPLRIEFFY 1905
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 5,020,409,952
Number of extensions: 95067230
Number of successful extensions: 283058
Number of sequences better than 10.0: 67
Number of HSP's gapped: 282749
Number of HSP's successfully gapped: 71
Length of query: 1221
Length of database: 1,040,966,779
Length adjustment: 140
Effective length of query: 1081
Effective length of database: 592,366,879
Effective search space: 640348596199
Effective search space used: 640348596199
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
Dictyostelium discoideum cDNA Project Home