Dictyostelium discoideum cDNA Contig-U11156-1

Assembled

Chromosomal Location of Contig-U11156-1

Sequence Contig-U11156-1

GGACAATTTT AATTTTCTTA AAAAGCAACA ATCGTTAAAA AAAACGTTTA
ATTGTTGTTA AGAAACAATA AATATAATTA TATAAAATGG AAGAAGTTCC
ACAAAAAATT GATTTTGCAG GAGAAGAATC AAAAATTTTA AAATATTGGG
ATGATATTAA AGCATTTGAA ACCTCAGTAA AAATGAGTGA AGGTAAACCA
GAGTATTCAT TTTATGATGG ACCACCATTT GCAACAGGTT TACCACATTA
TGGACATATT TTAGCAGGTA CAATTAAAGA TACAATCACA CGTTATGCTC
ATCAAACTGG ACATCATGTT GAAAGACGTT TTGGATGGGA TTGTCATGGT
TTACCAATTG AGTTTGAAAT TGATAAACTT CATGGCGTTA GAACCAAGGA
GGATGTATTA AAGATGGGTA TTCCAACATA TAATCAACAT TGTCGTTCAA
TCGTTATGAA ATATTCACAT GAGTGGGAGA TCGTAGTCAA TCGTATGGGT
CGTTGGATCG ATATGAAAAA CAATTACAAA ACTATGGACA CACCATTTAT
GGAGAGTGTT TGGTGGGTTT TCCAAGAACT CTTTAAGAAG GATTTGGTGT
ACCAAGGTTT CAAAGTTATG CCATACTCAA TTGGCTGCAC AACACCATTA
TCAAACTTTG AAGCATCATC AAACTACAAG GATGTAAGTG ATCCAGCATG
TGTTGTTTCA TTCCAAACTC TTGATGATGA GAAAGTTTCA ATCTTGGCAT
GGACCACCAC CCCATGGACC CTTCCATCCA ATTTAGCATT GACTGTGAAT
CCAAAGATGG AATACATAAA GATCAATGAT ATCAAACGTA ATCAAATCTT
TATCCTTGGT AAAAATCGTA CTTCAATCCT CTACAAATCA GATAAGGAAT
ATACAGTTTT AGAAACAATG AAAGGCACAG ATTTAATTGG TAAAAAGTAT
GTACCAATGT TCCCATACTT TGCAAGTGAT GCCAATATGG GTGGTTTTCG
TTGTTATTGG TGGGTGATTT CGTTACCGAT GATTCTGGTA CCG-------
---TCGTCGT ACCAAACCAA TTAAATTCCC ACTCAAAGAA TTTATGGTCA
TCACTGAGAA TCAACAATAT CTCGCCGATT TAGAATCACT CAAATCTTAT
ATCCTCGAGG AATTAAATAT CCAAAATATC GTTCTCACAA GTGATGAAGG
TTCATTCGTT GTTGTCACTG CTGAAGCCGA TAACAAACGT TTAGGTGCCC
GTTTAAAGAA TGACTTTAAG AAGATCTCAC CATTAATCTC TAAACTCACC
AATGAACAAC TTCGTGAATT CCAAAAAACT CAAACCATCG ATATTCTTGG
TCATGAACTC ACCTCTGAAG ATCTTAAAAT CATCCGTAAA TATAATGGTG
AAACTACAAA CTCTGAACCT TCAGGTAATG AAGAAATCTT AACAGTTTTA
GATCTTACTG TCGATAGTGC ACTCTATGAA AAAGGTTTGG CTCGTGAATT
AATCAATCGT GTTCAAAGAC TTAGAAAGAA GAGTGGTCTC ACCTTTGATG
ATCCAGTATC AATGTTTTAT CATACTAAAG AAGCTGAATT AAAAACTGCC
ATTGAAAATA ATAACGATTA CATTAAAGAA ACCATTTTAT TCAATCTTCA
ATTCTCTGAA ACTACTTCAC CATCAAATTC ATTTGCAACT GAAATTGTCT
CAATTGTTAA AGATAATGAT GCTGAAATTT ATTTCCTTAA AAATTAATTC
AAAAAAAAAG TTAATTATCT AGATATATAA ATAAATAAAT TTTTTAAAAA
AAAAAACAAA ACAAAACAAA ACAAATAAAT TATTTTTTNC TTTATACATA
TA

Translated Amino Acid Sequence Contig-U11156-1

tiliflksnnr*kkrlivvkkq*i*LYKMEEVPQKIDFAGEESKILKYWDDIKAFETSVK
MSEGKPEYSFYDGPPFATGLPHYGHILAGTIKDTITRYAHQTGHHVERRFGWDCHGLPIE
FEIDKLHGVRTKEDVLKMGIPTYNQHCRSIVMKYSHEWEIVVNRMGRWIDMKNNYKTMDT
PFMESVWWVFQELFKKDLVYQGFKVMPYSIGCTTPLSNFEASSNYKDVSDPACVVSFQTL
DDEKVSILAWTTTPWTLPSNLALTVNPKMEYIKINDIKRNQIFILGKNRTSILYKSDKEY
TVLETMKGTDLIGKKYVPMFPYFASDANMGGFRCYWWVISLPMILVP---

---RRTKPIKFPLKEFMVITENQQYLADLESLKSYILEELNIQNIVLTSDEGSFVVVTAE
ADNKRLGARLKNDFKKISPLISKLTNEQLREFQKTQTIDILGHELTSEDLKIIRKYNGET
TNSEPSGNEEILTVLDLTVDSALYEKGLARELINRVQRLRKKSGLTFDDPVSMFYHTKEA
ELKTAIENNNDYIKETILFNLQFSETTSPSNSFATEIVSIVKDNDAEIYFLKN*fkkkvn
yldi*inkffkkknktkqnk*iifxfihi

Homology Contig-U11156-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U11156-1 (Contig-U11156-1Q) /CSM_Contig/Conti...  3340  0.0
Contig-U13603-1 (Contig-U13603-1Q) /CSM_Contig/Conti...    52  2e-06
Contig-U13677-1 (Contig-U13677-1Q) /CSM_Contig/Conti...    40  0.008
Contig-U11579-1 (Contig-U11579-1Q) /CSM_Contig/Conti...    38  0.033
Contig-U12223-1 (Contig-U12223-1Q) /CSM_Contig/Conti...    36  0.13
Contig-U09292-1 (Contig-U09292-1Q) /CSM_Contig/Conti...    36  0.13
Contig-U05805-1 (Contig-U05805-1Q) /CSM_Contig/Conti...    36  0.13
Contig-U01271-1 (Contig-U01271-1Q) /CSM_Contig/Conti...    36  0.13
Contig-U14772-1 (Contig-U14772-1Q) /CSM_Contig/Conti...    34  0.52
Contig-U13538-1 (Contig-U13538-1Q) /CSM_Contig/Conti...    34  0.52

Homology Contig-U11156-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ354953) Dictyostelium discoideum cDNA clone:dda55d07, 3' ...  1346   0.0    1
(BJ406870) Dictyostelium discoideum cDNA clone:dds36p14, 3' ...  1342   0.0    1
(BJ350074) Dictyostelium discoideum cDNA clone:dda38i16, 3' ...  1340   0.0    1
(BJ354510) Dictyostelium discoideum cDNA clone:dda53i20, 3' ...  1334   0.0    1
(BJ382453) Dictyostelium discoideum cDNA clone:ddc44e21, 3' ...  1332   0.0    1
(BJ404411) Dictyostelium discoideum cDNA clone:dds28n09, 3' ...  1322   0.0    1
(BJ348131) Dictyostelium discoideum cDNA clone:dda32d11, 3' ...  1322   0.0    1
(BJ352444) Dictyostelium discoideum cDNA clone:dda46d21, 3' ...  1320   0.0    1
(BJ408264) Dictyostelium discoideum cDNA clone:dds45b12, 3' ...  1318   0.0    1
(BJ408618) Dictyostelium discoideum cDNA clone:dds46l11, 3' ...  1314   0.0    1

Homology Contig-U11156-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


BC064686_1(BC064686|pid:none) Xenopus laevis hypothetical protei...   408   e-112
(P41252) RecName: Full=Isoleucyl-tRNA synthetase, cytoplasmic;  ...   406   e-111
AB209234_1(AB209234|pid:none) Homo sapiens mRNA for Isoleucyl-tR...   406   e-111
AL136097_7(AL136097|pid:none) Human DNA sequence from clone RP11...   406   e-111
U04953_1(U04953|pid:none) Human isoleucyl-tRNA synthetase mRNA, ...   406   e-111
BX537417_1(BX537417|pid:none) Homo sapiens mRNA; cDNA DKFZp686L0...   404   e-111
AK136132_1(AK136132|pid:none) Mus musculus in vitro fertilized e...   404   e-111
CR382127_7(CR382127|pid:none) Yarrowia lipolytica strain CLIB122...   393   e-107
FN392322_738(FN392322|pid:none) Pichia pastoris GS115 chromosome...   387   e-106
AE017341_233(AE017341|pid:none) Cryptococcus neoformans var. neo...   387   e-106