Dictyostelium discoideum cDNA Contig-U10985-1

Assembled

Chromosomal Location of Contig-U10985-1

NO HIT FOUND.

Sequence Contig-U10985-1

ACTGTTGGCC TACTGGATAT TGAAACCTTC ATTTAATATT ATGTAATAAA
TAATGACGGA TAATAAACAA TCCTCAATAC CTTCTTCCCC ACCTATTGTG
GTACCAACAA CTACAACAGA TATTAATTCA TTTACATCTT CTCCAACCTC
AACACAAGGT TCAATGACAC CAAACCCAAA TGTTATTATA CCAACACAAC
CACCAACACA ACCAATAACT CAATCAAATT CAACATCTAC TCCTTCTTCT
TCTTCTTCAT CTTCAAATAA AACATTTGAA TCAATATTAG AATCATGGAA
ATTATTTAAT ATTGATAAAA AAAAGAATGA ATTTGGTGAT AATGTAACAC
AAATTGGTGC ATTAAAAGAA GATTGTCTAA AGAGTAGAAA AGTATTAGCA
AAACAAACAC AAGATTTTAA AAAGTTTACA GATGATGAAA AGATTAAACA
ATTTGGATCA CTTTTAAAAC TTTATCAAGA TGAAGTTGAT AAACTCACCA
AACGTAGTAA ATTCACCGAG ACAGTATTCC TTGGTATGTA TAAGGATTTG
AATGAGATAT CAGATCCTGT ACCTGCATTG AGTGCAGCAT TGGAGGAATG
CTCAAAAGTT GATCAAACCA CTAAATTAGA GATAGAGAAT AGAAAATTAC
AAATGCAGCT AACCGATTTC AAAAAGGAGT TTCAAGAGAT TCAAAATCAA
GAAGTCACAA TCCGAAGATT GGAAGATAAA ATCAAAGAGA TGAATTCCGA
GCGTTCCGAA TTCATTTCAA TGGATAAATT GAATTTAAAA GAACAAGAGT
TGAAACAAGA ATTTCAACAA CAGCTACAAG CTTCGAAACA ACGTGAACAA
CAATTACAAA AACAAAATGA CCAATTACAA GATGAACTTA CCAAAATCTC
CATTACAAAT AATCAAATTC AAAATCAACT ATTGGATATT AAAACCAAAT
ACGAGGATGA ATTGCAATCT AAACATTCAG AGATTGAAAT GCTAACTGTT
GAATTCGATA GAGTTCAATC TAAACTCACC ACACTTCAAC GTGAGAATCT
ATCAATTCGT GAGGAATCAA TGGTTGAAAA GAATTCCCTA ACACCAATGG
TTAAAAGAGT AGCCGATTTA GAGTTGGAAA TGTTACAAAA AGAAACTGAA
ACCTCTAAAT TGGTCGACCA AATTCAAGAG TTAAAAACTC ACATTTCAAC
ACAACAAGAT GAGAAATCAA ATCTTTCAAG ACTTTATGAA ATTGAAAAGG
AAAAAGTTGA AAAACTTGAT AAATACATTC AAAATAATCC ATCACCTTCT
GAGGTTGAAT TAATTAAAAA AGAACTATTA ACCTTAAAAG CAATTGTTGA
TCAAGATGAA ATTAATAAAG CAATAATTGA TCAAGAAAAA GATAATAATC
AAAATAATAC TACTAATAAC ACTGGTGGTG GTAGTGATAA ACTATTAAAA
GATAAAAATA GACAATTAGA AAATGAATGT ACACGTTTAC GTCTTTTAAC
AAATACACAA GAATCTGAAT TAATTGAAAA GAATTTAGCA ATTGATGAAT
TACAAAAAGT TAAAGATGAA CAATTATTAT TAATTCAAAG ATTAGAAGGA
GATTTATCAA ATGGTGGTGT TATTAATGGT TTAAATTCAA ATGGTAATGC
TGGTTCTTTA GTTTATCAAC AACAACAACA ACAACAACAA CACCATCATC
ATTTAAATCA TCATCATCAT CATAACTCAT TATCATCATC ACAATTACAA
TCATCAAATA AAGATATAAT GGATATTTCT GACCTTTTAC CTACAAATAC
AACAAACAAT ACAACAATTA ATACATCACT ATCATCATCA TCATCATCAA
ATAATAACTC ACCCATTAAA TATTGGTACT AATAATAATA ATAACAGTGT
AAATACATTA ATAAGATCAT CAAATGAATC ATTTTCAAAT TCACCTCAAC
AAGTTGGTGC TGGTAATATT GTACAATCAA AAGATGACAA AATGTTAGAT
ATTGTAATAA GTCAACGTGA TAGATTTAAA ACAAAGATTG TAGAATTAGA
GAGTGATAAA AGTAAACTTG AAAAACAACT AGATTCATGT CGTCAAGAAT
TATCATCATT AAAAACTGAT AATATTAAAT TATATGAAAA AATTAGATTT
TTACAAAGTT ATGATAAAAA TAAATCAGGT GGTGGTGGCA TCAACAATGC
CAATAAAGAA ATTCATAGTA AAAGAAATAA TAGTGGTTTT GAAAAATCAT
ATGATGTTGA AAGAGGTTTA GATATTCCTT CCTCTTCCTC ATCATCATCA
TCTCAAGGTG GACCTGAAAC TGAAGAGAAA TATGGTAAAC TTTATGAAGA
ATCAATAAAT CCATTTTTAT CATTCAATAA AAAAGAGAAA TATCGAAGAT
ATAGAGAGAT GAATACAGCT GAAAGGGTGA TTTTAAATGG TTCAAGATTT
TTCCTATCAA ATAAATACAG TCGTCTATTC CTTTTCATAT ATTCTGTCCT
ACTTCATCTT ATGGTATTTC TTACACTCTA TAGATTAGCA ACAATCACAA
CTGAACAACA CGAAATGGGT TTTGGTAATA TACATCAAAC TCCTCCACTA
CCTCAAAAAG ATATTGTGAT AGTATAATAG AACAATAATA AT--------
--TTTAAAAA GACATATCCA GAATCACCAG ATGCACCATA TTCTAAAAAG
AATGGTATTT CATTTAATCT TCAAGAATTA TCAAGTGAAC AGTTGACAGA
GTTATTAATG AAAGAGAGAG AAAAGAAAGG TATAAAAACT AAAACACCAA
ATGGTGCAAA TGTACCAACA AAGAAAGCCG TTGATCCTGC AATTGCAGCC
AAAAGAGCAG AAGAAGATAG AATTAGACAA GAGAATAGAA AGAAAATTGA
AGAGGAAGCA CGTGAAAGAA GAAGAAGAGA AGAAGAAGAG GAAAGATTTA
AACGTGAAGA AGTTCAAAAG ATTAGACAAT TAAATGATCC AAATAGTAGT
ACATTAAAGA ATAGAATTAA AGAGATTGAA GAACAAGAGA AAAAGAAAAA
ACAAGAAGAT GAAGAAAAGA AACAACAAAG AATGTCAGTA GGTTTTAATA
ATACTAGTAA TAGTAATATC AATAATAATA ATGCACCAAT AAATAAAAGA
GGTAGTGTTA GTTTATCATA TCAACAAGCA GCAGCAGCAA TTAATCAACC
AGATGAAAAT CCAGTTTCAC AAAGACAAAA AGAATTGGAA GAAATTAATA
GAATGCGTAA AGAAAGACAC CTTTCTTCAT TTAACAATAA TGATGATTCA
TCAAATACAC CAAGTAGACA AAAGGAATTA GAAGAGATTG ATCGTCTTAG
AAAAGAGAAT AAAGGTCCAG TTAGTCAAGT TTCATCAACT GAGGAAGAGA
ATGAAAATAG AGTTAACTCT AGACAAAAAG AATTGGAGGA GATTGAAAGA
TCAAGAAAAG AAAGAAATGC AAATAATATA TTCCTTCAAA ATAATGGTAA
TACTGAACGT GGTTCAACTA GACAAAAAGA ATTGGAAGAA ATTGATCGTC
TTCGTAAAGA GAAACGTCAA TCTGTTAGTT TGGAAGGTTC TAATCAATTT
GGTGAAAGTG GTCCAAGTGC TGATAGTTTA GATTCATTAA AAACTCAAAG
ACAAAAAGAA TTGGAAGAAA TTGATAGAGA AAGAAACCAA AAAAGATTAT
CATTTAATCA AGAAAATAAT AATAATAATA ATAATAATAA TACAAATAAT
AATGTAGAAC AAGAACAAAA ACCAGAACCA ATTAAAGAAG AACAAGAAGA
AGAAGAACAA AAATTATCAT CACCATCAAC AGAACCAATT GAATTAACAA
GAGAACAAAG ATTACAAAAA TTAAAAGAAG AAAAAGAAGC TATTAAAGAA
AAAGAAGAAC AAGAAAAGAT TGAACGTGAG AAACAACGTG AACAACGTCG
TATTGAGAAA GAACAACGTG AAAAAGAAGA GAGAGAACAA GAGGAGCTCG
CTGAAATTGA ACGTGAGAAA CAACGTGAAC AACGTCGTCT CGAGAAAGAA
CAACGTGAAA AGGAGGATAA AGAGCGTGAA AAGGAATTAA AACGTCAAAA
AGAGGAACGT GAACGTGAAA AGGAACAACG TCGTCTCGAA AAGGAACAAA
AAGATAGAGA AGAAAGAAAA CTTGAACGTG AGAAGGAACT TGAACGTGAA
CGTGAGAAAG AACTTGAGCG TGAGCGTGAA CGTGAACAAC GTCGTCTTGA
AAGAGAGAGG GATGAAATTG AACGTGAGCA ACGTCGTCTT GAAAAAATTC
AACACGAAAA GGAGGAAAAG GAAAGATTAG AAAGAGAATT AAAAGAAAAA
GAAGAACGTG AACTCAAAGA AAAGAAAGAA AAAGATTTAG ATAGTTTCGA
AGAACAACGT AGAAAACGTG AACAAGAAAG AAGATTAAGA AAAGAACAAA
TTGAGAGAGA GGTCGAAGAG GAAAGCAAAA GAATTGAAGC TGAGCGTGAA
GCTAGAAAGA AAGCCAGAGA ACTCGATAGA CCATCAGTAT CCTCTCCAAT
CTCTTCCTCT TCCTCACCTT CAAATCCTTC CTCCTCATCA CCAACTCCAA
TCAAGTAATA CCTCTCCTTC AAATTCAAGT GGTAATCTCA TGCTCTCTGA
ACAAGAACAA CGTAGAAGAG ATCGTGAACA ACGTCGTTTA GAATTAGAAC
AAGAAGCTAA TAAACTTGAA GAAGAACGTA AGAAAAGACA AGAAGAAAGA
AGACTCGCAA GAGAACAAAA AGAAAGAGAA TTGGAAGAAG AAACAAAAAG
ACTTGAACAA GAAAGAGAAG AACGTCGTAG AAAGAGAGAA GAAGCTAAAA
ATTCTTAAAT CTCATTTCTT ATTAATTTTT AAAAAAAAAA AAAAATC

Translated Amino Acid Sequence Contig-U10985-1

tvglldietfi*yyvinndg**tilntffptycgtnnynry*fiyifsnlntrfndtkpk
cyytntttnttnnsikfniysfffffifk*ni*inirimeii*y**kke*iw**cntnwc
ikrrlske*ksisktntrf*kvyr**kd*tiwitfktlsr*s**thqt**ihrdsipwyv
*gfe*dirsctciecsiggmlks*snh*irdre*kitnaanrfqkgvsrdsksrshnpki
gr*nqrdefrafrihfng*iefkrtrvetristtatsfett*ttitktk*pitr*tyqnl
hyk*snskstigy*nqirg*iai*tfrd*nanc*ir*ssi*thhtst*esins*ging*k
efpntng*kssrfrvgnvtkrn*nl*igrpnsrvknshfnttr*eiksfktl*n*kgks*
kt**ihsk*sitf*g*in*krtinlksnc*sr*n**snn*srkr**sk*yy**hwww***
tikr*k*tirk*mytftsfnkytri*in*kefsn**itks*r*tiiinskirrrfikwwc
y*wfkfkw*cwffslsttttttttpssfksssss*liiiititiik*ryngyf*pftyky
nkqynn*yitiiiiiik**lth*ilvliiiitv*ih**dhqmnhfqihlnklvlvilynq
kmtkc*il**vnvidlkqrl*n*rvikvnlknn*ihvvknyhh*kliilnymkkldfykv
mikinqvvvastmpikkfivkeiivvlknhmmlkev*iflplphhhhlkvdlklkrnmvn
fmknq*ihfyhsikkrniedier*iqlkg*f*mvqdfsyqintvvysfsyilsyfilwyf
lhsid*qqsqlnntkwvlviyikllhylkkil**YNRTII---

---FKKTYPESPDAPYSKKNGISFNLQELSSEQLTELLMKEREKKGIKTKTPNGANVPTK
KAVDPAIAAKRAEEDRIRQENRKKIEEEARERRRREEEEERFKREEVQKIRQLNDPNSST
LKNRIKEIEEQEKKKKQEDEEKKQQRMSVGFNNTSNSNINNNNAPINKRGSVSLSYQQAA
AAINQPDENPVSQRQKELEEINRMRKERHLSSFNNNDDSSNTPSRQKELEEIDRLRKENK
GPVSQVSSTEEENENRVNSRQKELEEIERSRKERNANNIFLQNNGNTERGSTRQKELEEI
DRLRKEKRQSVSLEGSNQFGESGPSADSLDSLKTQRQKELEEIDRERNQKRLSFNQENNN
NNNNNNTNNNVEQEQKPEPIKEEQEEEEQKLSSPSTEPIELTREQRLQKLKEEKEAIKEK
EEQEKIEREKQREQRRIEKEQREKEEREQEELAEIEREKQREQRRLEKEQREKEDKEREK
ELKRQKEEREREKEQRRLEKEQKDREERKLEREKELEREREKELEREREREQRRLERERD
EIEREQRRLEKIQHEKEEKERLERELKEKEERELKEKKEKDLDSFEEQRRKREQERRLRK
EQIEREVEEESKRIEAEREARKKARELDRPSVSSPISSSSSPSNPSSSSPTPIK*ylsfk
fkw*shal*trtt*krs*ttsfrirtrs**t*rrt*ektrrkktrkrtkrkrigrrnkkt
*trkrrts*kerrs*kflnlisy*flkkkkn

Homology Contig-U10985-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U10985-1 (Contig-U10985-1Q) /CSM_Contig/Conti...  2732  0.0
Contig-U14059-1 (Contig-U14059-1Q) /CSM_Contig/Conti...    44  0.001
Contig-U10454-1 (Contig-U10454-1Q) /CSM_Contig/Conti...    44  0.001
Contig-U01496-1 (Contig-U01496-1Q) /CSM_Contig/Conti...    44  0.001
Contig-U14684-1 (Contig-U14684-1Q) /CSM_Contig/Conti...    42  0.006
Contig-U13988-1 (Contig-U13988-1Q) /CSM_Contig/Conti...    42  0.006
Contig-U13943-1 (Contig-U13943-1Q) /CSM_Contig/Conti...    42  0.006
Contig-U12363-1 (Contig-U12363-1Q) /CSM_Contig/Conti...    42  0.006
Contig-U11692-1 (Contig-U11692-1Q) /CSM_Contig/Conti...    42  0.006
Contig-U08544-1 (Contig-U08544-1Q) /CSM_Contig/Conti...    42  0.006

Homology Contig-U10985-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AB239909) Dictyostelium discoideum scdA gene for similar to...   973   0.0    7
(BJ341356) Dictyostelium discoideum cDNA clone:dda6f10, 3' e...   906   0.0    2
(BJ428489) Dictyostelium discoideum cDNA clone:ddv12k04, 3' ...   902   0.0    2
(BJ428311) Dictyostelium discoideum cDNA clone:ddv11p11, 3' ...   890   0.0    2
(BJ439328) Dictyostelium discoideum cDNA clone:ddv40i02, 3' ...   878   0.0    2
(BJ438193) Dictyostelium discoideum cDNA clone:ddv36l16, 3' ...   878   0.0    3
(BJ407295) Dictyostelium discoideum cDNA clone:dds38i01, 3' ...   878   0.0    2
(BJ400834) Dictyostelium discoideum cDNA clone:dds15d02, 3' ...   878   0.0    3
(BJ383978) Dictyostelium discoideum cDNA clone:ddc47h21, 3' ...   878   0.0    2
(BJ357834) Dictyostelium discoideum cDNA clone:dda64i22, 3' ...   878   0.0    3

Homology Contig-U10985-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


AB239909_1(AB239909|pid:none) Dictyostelium discoideum scdA gene...   781   0.0
BC025422_1(BC025422|pid:none) Homo sapiens cut-like homeobox 1, ...   186   1e-44
L12579_1(L12579|pid:none) Human alternatively spliced CUTL1 mRNA...   184   2e-44
(Q13948) RecName: Full=Protein CASP;  &AB462994_1(AB462994|pid:n...   184   2e-44
BC054370_1(BC054370|pid:none) Mus musculus cut-like homeobox 1, ...   183   6e-44
AB026658_20(AB026658|pid:none) Arabidopsis thaliana genomic DNA,...   177   3e-42
BC079570_1(BC079570|pid:none) Mus musculus cut-like homeobox 1, ...   176   8e-42
CR857295_1(CR857295|pid:none) Pongo abelii mRNA; cDNA DKFZp469C1...   175   1e-41
AK220173_1(AK220173|pid:none) Mus musculus mRNA for mKIAA4047 pr...   172   8e-41
BC090847_1(BC090847|pid:none) Mus musculus cut-like homeobox 1, ...   172   1e-40