Homology Contig-U10972-1 vs Protein
Query= Contig-U10972-1 (Contig-U10972-1Q) /CSM_Contig/Contig-U10972-1Q.Seq.d
(2216 letters)
Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE017343_431(AE017343|pid:none) Cryptococcus neoformans var. neo... 180 2e-43
(Q92359) RecName: Full=Pumilio domain-containing protein C6G9.14... 176 3e-42
AP007151_730(AP007151|pid:none) Aspergillus oryzae RIB40 genomic... 169 3e-40
EF068153_1(EF068153|pid:none) Hortaea werneckii pumilio-family R... 166 4e-39
CR954215_201(CR954215|pid:none) Ostreococcus tauri strain OTTH05... 164 2e-38
CU638743_632(CU638743|pid:none) Podospora anserina genomic DNA c... 162 4e-38
CR380947_15(CR380947|pid:none) Candida glabrata strain CBS138 ch... 152 5e-35
S57889_1(S57889|pid:none) YGL023=putative regulatory protein [Sa... 152 5e-35
CR382131_428(CR382131|pid:none) Yarrowia lipolytica strain CLIB1... 150 1e-34
AJ851393_1(AJ851393|pid:none) Gallus gallus mRNA for hypothetica... 150 2e-34
CR382121_377(CR382121|pid:none) Kluyveromyces lactis strain NRRL... 149 3e-34
CP000496_474(CP000496|pid:none) Pichia stipitis CBS 6054 chromos... 149 3e-34
AM429046_1(AM429046|pid:none) Vitis vinifera contig VV78X149461.... 149 4e-34
BT009970_1(BT009970|pid:none) Drosophila melanogaster RE63138 fu... 148 7e-34
A46221(A46221;S22026) abdominal segment formation protein pumili... 148 9e-34
CR382133_361(CR382133|pid:none) Debaryomyces hansenii strain CBS... 148 9e-34
AK154059_1(AK154059|pid:none) Mus musculus 2 days neonate thymus... 148 9e-34
AE014297_902(AE014297|pid:none) Drosophila melanogaster chromoso... 148 9e-34
(Q14671) RecName: Full=Pumilio homolog 1; Short=Pumilio... 148 9e-34
AB091091_1(AB091091|pid:none) Xenopus laevis mRNA for Pumilio, c... 147 1e-33
BC080379_1(BC080379|pid:none) Xenopus laevis pumilio 1, mRNA (cD... 147 1e-33
AK147185_1(AK147185|pid:none) Mus musculus 17 days embryo heart ... 147 2e-33
AC021198_3(AC021198|pid:none) Sequence of BAC F14D7 from Arabido... 146 3e-33
DQ446324_1(DQ446324|pid:none) Arabidopsis thaliana clone pENTR22... 146 3e-33
DQ275192_1(DQ275192|pid:none) Gallus gallus pumilio 2 (pum2) mRN... 145 5e-33
CU928179_422(CU928179|pid:none) Zygosaccharomyces rouxii strain ... 145 5e-33
AL356320_1(AL356320|pid:none) Human DNA sequence from clone RP11... 145 8e-33
D43951_1(D43951|pid:none) Homo sapiens mRNA for KIAA0099 protein... 145 8e-33
AB385279_1(AB385279|pid:none) Synthetic construct DNA, clone: pF... 145 8e-33
(Q80U78) RecName: Full=Pumilio homolog 1; &AL627104_1(AL627104|... 145 8e-33
AK222605_1(AK222605|pid:none) Homo sapiens mRNA for pumilio homo... 145 8e-33
AK163977_1(AK163977|pid:none) Mus musculus ES cells cDNA, RIKEN ... 145 8e-33
AL356320_6(AL356320|pid:none) Human DNA sequence from clone RP11... 145 8e-33
AE016820_284(AE016820|pid:none) Ashbya gossypii (= Eremothecium ... 144 1e-32
X62589_1(X62589|pid:none) D.melanogaster mRNA for pumilio protein. 144 1e-32
AF128626_1(AF128626|pid:none) Dictyostelium discoideum RNA bindi... 144 1e-32
T26218(T26218)hypothetical protein W06B11.2 - Caenorhabditis ele... 143 3e-32
U39854_2(U39854|pid:none) Caenorhabditis elegans cosmid W06B11, ... 143 3e-32
AF272350_1(AF272350|pid:none) Homo sapiens translational repress... 142 4e-32
BC041773_1(BC041773|pid:none) Mus musculus pumilio 2 (Drosophila... 142 4e-32
AK141682_1(AK141682|pid:none) Mus musculus 9 days embryo whole b... 142 4e-32
AB383813_1(AB383813|pid:none) Synthetic construct DNA, clone: pF... 142 4e-32
AK161357_1(AK161357|pid:none) Mus musculus adult male testis cDN... 142 4e-32
AK304198_1(AK304198|pid:none) Homo sapiens cDNA FLJ53521 complet... 142 4e-32
AK122225_1(AK122225|pid:none) Mus musculus mRNA for mKIAA0235 pr... 142 4e-32
AK163964_1(AK163964|pid:none) Mus musculus ES cells cDNA, RIKEN ... 142 4e-32
AP000383_26(AP000383|pid:none) Arabidopsis thaliana genomic DNA,... 142 5e-32
AM494958_199(AM494958|pid:none) Leishmania braziliensis chromoso... 141 9e-32
CT005260_204(CT005260|pid:none) Leishmania major strain Friedlin... 141 1e-31
AF153276_1(AF153276|pid:none) Populus tremula x Populus tremuloi... 140 3e-31
(Q80U58) RecName: Full=Pumilio homolog 2; &AY027917_1(AY027917|... 139 3e-31
(Q8TB72) RecName: Full=Pumilio homolog 2; Short=Pumilio... 139 3e-31
(O94462) RecName: Full=mRNA-binding protein puf3; AltName: Full=... 138 7e-31
CP001328_613(CP001328|pid:none) Micromonas sp. RCC299 chromosome... 135 6e-30
AK064999_1(AK064999|pid:none) Oryza sativa Japonica Group cDNA c... 135 6e-30
AY870927_1(AY870927|pid:none) Physcomitrella patens PUF-domain R... 135 8e-30
CR940353_231(CR940353|pid:none) Theileria annulata strain Ankara... 134 1e-29
EU162610_3(EU162610|pid:none) Boechera divaricarpa clone contig1... 134 1e-29
AC157503_10(AC157503|pid:none) Medicago truncatula chromosome 2 ... 133 2e-29
AY096653_1(AY096653|pid:none) Arabidopsis thaliana putative pumi... 133 2e-29
AM465314_1(AM465314|pid:none) Vitis vinifera contig VV78X245166.... 132 4e-29
AM484407_2(AM484407|pid:none) Vitis vinifera contig VV78X059718.... 132 5e-29
AC073942_3(AC073942|pid:none) Sequence of BAC F16L1 from Arabido... 132 7e-29
A84693(A84693) hypothetical protein At2g29140 [imported] - Arabi... 132 7e-29
AY179886_1(AY179886|pid:none) Schistocerca americana pumilio RBD... 132 7e-29
EU162611_32(EU162611|pid:none) Capsella rubella clone contig46 B... 131 9e-29
EU162608_47(EU162608|pid:none) Arabidopsis lyrata subsp. lyrata ... 130 2e-28
AM270335_9(AM270335|pid:none) Aspergillus niger contig An15c0080... 130 2e-28
EU162610_4(EU162610|pid:none) Boechera divaricarpa clone contig1... 130 2e-28
AK102366_1(AK102366|pid:none) Oryza sativa Japonica Group cDNA c... 130 2e-28
AF427791_4(AF427791|pid:none) Hordeum vulgare Mla locus, complet... 130 3e-28
AP008209_592(AP008209|pid:none) Oryza sativa (japonica cultivar-... 130 3e-28
AP008211_64(AP008211|pid:none) Oryza sativa (japonica cultivar-g... 130 3e-28
AC079022_17(AC079022|pid:none) Oryza sativa chromosome 5 clone P... 130 3e-28
EU162608_52(EU162608|pid:none) Arabidopsis lyrata subsp. lyrata ... 130 3e-28
AK068902_1(AK068902|pid:none) Oryza sativa Japonica Group cDNA c... 129 3e-28
AJ639658_1(AJ639658|pid:none) Dugesia japonica pum gene for Pumi... 128 8e-28
AP003277_15(AP003277|pid:none) Oryza sativa Japonica Group genom... 128 1e-27
BT055341_1(BT055341|pid:none) Zea mays full-length cDNA clone ZM... 128 1e-27
EU162608_48(EU162608|pid:none) Arabidopsis lyrata subsp. lyrata ... 126 3e-27
T15717(T15717)hypothetical protein C30G12.7 - Caenorhabditis ele... 126 4e-27
U21319_6(U21319|pid:none) Caenorhabditis elegans cosmid C30G12, ... 126 4e-27
AC012680_10(AC012680|pid:none) Arabidopsis thaliana chromosome 1... 125 5e-27
EU162611_33(EU162611|pid:none) Capsella rubella clone contig46 B... 125 6e-27
AP004048_14(AP004048|pid:none) Oryza sativa Japonica Group genom... 125 6e-27
AL442110_6(AL442110|pid:none) Oryza sativa genomic DNA, chromoso... 125 8e-27
AL606449_24(AL606449|pid:none) Oryza sativa genomic DNA, chromos... 125 8e-27
AL606606_2(AL606606|pid:none) Oryza sativa genomic DNA, chromoso... 125 8e-27
AC009400_4(AC009400|pid:none) Arabidopsis thaliana chromosome II... 124 1e-26
AK117911_1(AK117911|pid:none) Arabidopsis thaliana At3g10360 mRN... 124 1e-26
BT066014_1(BT066014|pid:none) Zea mays full-length cDNA clone ZM... 124 1e-26
EU968381_1(EU968381|pid:none) Zea mays clone 320006 unknown mRNA. 124 1e-26
AP008218_894(AP008218|pid:none) Oryza sativa (japonica cultivar-... 124 2e-26
AF360298_1(AF360298|pid:none) Arabidopsis thaliana putative pumi... 123 2e-26
AL049480_16(AL049480|pid:none) Arabidopsis thaliana DNA chromoso... 123 2e-26
BT063143_1(BT063143|pid:none) Zea mays full-length cDNA clone ZM... 122 7e-26
BT054848_1(BT054848|pid:none) Zea mays full-length cDNA clone ZM... 122 7e-26
AM502254_263(AM502254|pid:none) Leishmania infantum chromosome 36. 120 2e-25
EU965347_1(EU965347|pid:none) Zea mays clone 285472 maternal pro... 120 3e-25
AE017342_490(AE017342|pid:none) Cryptococcus neoformans var. neo... 119 5e-25
BT034406_1(BT034406|pid:none) Zea mays full-length cDNA clone ZM... 119 6e-25
AF507056_1(AF507056|pid:none) Phytophthora infestans pumilio-lik... 118 8e-25
AM494972_9(AM494972|pid:none) Leishmania braziliensis chromosome... 118 8e-25
BT033344_1(BT033344|pid:none) Zea mays full-length cDNA clone ZM... 118 1e-24
EU974182_1(EU974182|pid:none) Zea mays clone 442221 hypothetical... 117 1e-24
FN357471_4(FN357471|pid:none) Schistosoma mansoni genome sequenc... 115 5e-24
FN357471_3(FN357471|pid:none) Schistosoma mansoni genome sequenc... 115 5e-24
CR382135_617(CR382135|pid:none) Debaryomyces hansenii strain CBS... 115 9e-24
AM448281_2(AM448281|pid:none) Vitis vinifera contig VV78X156397.... 114 1e-23
BT066929_1(BT066929|pid:none) Zea mays full-length cDNA clone ZM... 113 3e-23
AP008218_1191(AP008218|pid:none) Oryza sativa (japonica cultivar... 112 7e-23
AY034830_1(AY034830|pid:none) Trypanosoma brucei PUF1 (PUF1) gen... 112 7e-23
BT067429_1(BT067429|pid:none) Zea mays full-length cDNA clone ZM... 108 6e-22
CU928166_139(CU928166|pid:none) Kluyveromyces thermotolerans str... 108 6e-22
AY373519_1(AY373519|pid:none) Trypanosoma cruzi pumilio protein ... 108 1e-21
AE016814_35(AE016814|pid:none) Ashbya gossypii (= Eremothecium g... 107 1e-21
CR382135_307(CR382135|pid:none) Debaryomyces hansenii strain CBS... 107 2e-21
CU633900_690(CU633900|pid:none) Podospora anserina genomic DNA c... 106 3e-21
AY373518_1(AY373518|pid:none) Trypanosoma cruzi pumilio protein ... 104 2e-20
CU928174_446(CU928174|pid:none) Zygosaccharomyces rouxii strain ... 103 2e-20
CU928169_284(CU928169|pid:none) Kluyveromyces thermotolerans str... 103 2e-20
AM502236_141(AM502236|pid:none) Leishmania infantum chromosome 18. 101 1e-19
AM494955_144(AM494955|pid:none) Leishmania braziliensis chromoso... 100 2e-19
Z73117_1(Z73117|pid:none) S.cerevisiae chromosome XII reading fr... 100 4e-19
EU124641_1(EU124641|pid:none) Fasciola hepatica pumilio-like pro... 97 2e-18
EU124645_1(EU124645|pid:none) Geoplana sp. UK-2007a pumilio-like... 95 9e-18
AM502224_5(AM502224|pid:none) Leishmania infantum chromosome 6. 94 2e-17
AY373521_1(AY373521|pid:none) Trypanosoma cruzi pumilio protein ... 94 2e-17
AM494943_5(AM494943|pid:none) Leishmania braziliensis chromosome... 94 2e-17
AE016817_344(AE016817|pid:none) Ashbya gossypii (= Eremothecium ... 94 3e-17
CT005245_5(CT005245|pid:none) Leishmania major strain Friedlin, ... 93 4e-17
CT005270_148(CT005270|pid:none) Leishmania major strain Friedlin... 93 5e-17
EU124635_1(EU124635|pid:none) Echinococcus granulosus pumilio-li... 92 6e-17
EU124646_1(EU124646|pid:none) Girardia tigrina pumilio-like prot... 91 1e-16
EU124647_1(EU124647|pid:none) Mesocestoides corti pumilio-like p... 91 2e-16
AF076275_4(AF076275|pid:none) Arabidopsis thaliana BAC T15F16. ... 91 2e-16
CR380958_255(CR380958|pid:none) Candida glabrata strain CBS138 c... 90 3e-16
AM910987_215(AM910987|pid:none) Plasmodium knowlesi strain H chr... 89 9e-16
EU076903_1(EU076903|pid:none) Bambusa oldhamii putative pumilio-... 87 2e-15
BT036350_1(BT036350|pid:none) Zea mays full-length cDNA clone ZM... 84 3e-14
DQ056705_1(DQ056705|pid:none) Arabidopsis thaliana pumilio/Puf R... 83 4e-14
EU124643_1(EU124643|pid:none) Fasciola hepatica pumilio-like pro... 83 5e-14
BT062823_1(BT062823|pid:none) Zea mays full-length cDNA clone ZM... 82 1e-13
AY811134_1(AY811134|pid:none) Schistosoma japonicum SJCHGC07942 ... 81 1e-13
AC186756_13(AC186756|pid:none) Musa acuminata clone MA4_112I10, ... 81 1e-13
AB008267_13(AB008267|pid:none) Arabidopsis thaliana genomic DNA,... 81 2e-13
AC121237_22(AC121237|pid:none) Medicago truncatula clone mth2-22... 80 2e-13
EU124644_1(EU124644|pid:none) Fasciola hepatica pumilio-like pro... 79 7e-13
EU124638_1(EU124638|pid:none) Echinococcus granulosus pumilio-li... 79 9e-13
EU124650_1(EU124650|pid:none) Mesocestoides corti pumilio-like p... 76 6e-12
BT021317_1(BT021317|pid:none) Drosophila melanogaster RE10602 fu... 75 8e-12
AB026632_6(AB026632|pid:none) Arabidopsis thaliana genomic DNA, ... 72 8e-11
AY373526_1(AY373526|pid:none) Trypanosoma cruzi pumilio protein ... 71 1e-10
AC027032_3(AC027032|pid:none) Arabidopsis thaliana chromosome 1 ... 70 2e-10
(O74438) RecName: Full=Meiotic coiled-coil protein 2; &AB189990... 70 4e-10
AL929603_253(AL929603|pid:none) Trypanosoma brucei chromosome 1,... 69 9e-10
AL355926_12(AL355926|pid:none) Neurospora crassa DNA linkage gro... 69 9e-10
CU633900_702(CU633900|pid:none) Podospora anserina genomic DNA c... 68 1e-09
AB019231_9(AB019231|pid:none) Arabidopsis thaliana genomic DNA, ... 68 1e-09
AL021488_9(AL021488|pid:none) Caenorhabditis elegans YAC Y45F10A... 65 8e-09
CR382125_261(CR382125|pid:none) Kluyveromyces lactis strain NRRL... 64 2e-08
AM270040_2(AM270040|pid:none) Aspergillus niger contig An02c0460... 64 2e-08
AB016890_18(AB016890|pid:none) Arabidopsis thaliana genomic DNA,... 64 2e-08
(Q09312) RecName: Full=Fem-3 mRNA-binding factor 2; &T16128(T16... 64 2e-08
AP007162_536(AP007162|pid:none) Aspergillus oryzae RIB40 genomic... 64 2e-08
AM920437_1114(AM920437|pid:none) Penicillium chrysogenum Wiscons... 63 4e-08
AM502238_143(AM502238|pid:none) Leishmania infantum chromosome 20. 63 4e-08
AM502238_142(AM502238|pid:none) Leishmania infantum chromosome 20. 63 4e-08
CR380959_396(CR380959|pid:none) Candida glabrata strain CBS138 c... 63 5e-08
CT005259_137(CT005259|pid:none) Leishmania major strain Friedlin... 63 5e-08
CT005259_136(CT005259|pid:none) Leishmania major strain Friedlin... 63 5e-08
AC007727_3(AC007727|pid:none) Arabidopsis thaliana chromosome 1 ... 62 7e-08
AC084197_38(AC084197|pid:none) Caenorhabditis elegans cosmid Y73... 62 7e-08
(Q10238) RecName: Full=Meiotic PUF family protein 1; &AB248102_... 62 9e-08
AM270211_39(AM270211|pid:none) Aspergillus niger contig An09c022... 62 1e-07
CR382139_1154(CR382139|pid:none) Debaryomyces hansenii chromosom... 60 3e-07
FM992692_230(FM992692|pid:none) Candida dubliniensis CD36 chromo... 59 7e-07
CR382139_1046(CR382139|pid:none) Debaryomyces hansenii strain CB... 59 7e-07
(Q12221) RecName: Full=mRNA-binding protein PUF2; AltName: Full=... 57 4e-06
Z68111_6(Z68111|pid:none) S.cerevisiae chromosome XVI PCR produc... 57 4e-06
CU928179_724(CU928179|pid:none) Zygosaccharomyces rouxii strain ... 56 6e-06
AK226635_1(AK226635|pid:none) Arabidopsis thaliana mRNA for puta... 56 6e-06
CU928170_313(CU928170|pid:none) Kluyveromyces thermotolerans str... 54 2e-05
CR380954_379(CR380954|pid:none) Candida glabrata strain CBS138 c... 53 5e-05
CU928167_391(CU928167|pid:none) Kluyveromyces thermotolerans str... 52 7e-05
AF036698_2(AF036698|pid:none) Caenorhabditis elegans cosmid B027... 52 9e-05
CR382128_122(CR382128|pid:none) Yarrowia lipolytica strain CLIB1... 51 2e-04
CR380955_117(CR380955|pid:none) Candida glabrata strain CBS138 c... 50 3e-04
T22634(T22634) hypothetical protein F54C9.8 - Caenorhabditis ele... 50 4e-04
CR382132_720(CR382132|pid:none) Yarrowia lipolytica strain CLIB1... 49 6e-04
AM494949_40(AM494949|pid:none) Leishmania braziliensis chromosom... 48 0.001
AC137748_5(AC137748|pid:none) Oryza sativa (japonica cultivar-gr... 47 0.002
AB028608_3(AB028608|pid:none) Arabidopsis thaliana genomic DNA, ... 47 0.003
AE016819_575(AE016819|pid:none) Ashbya gossypii (= Eremothecium ... 47 0.003
BC043888_1(BC043888|pid:none) Xenopus laevis hypothetical protei... 47 0.004
BC088719_1(BC088719|pid:none) Xenopus laevis hypothetical protei... 47 0.004
CR855234_6(CR855234|pid:none) Oryza sativa genomic DNA, chromoso... 46 0.005
BC076757_1(BC076757|pid:none) Xenopus laevis MGC83110 protein, m... 46 0.005
BC161436_1(BC161436|pid:none) Xenopus tropicalis hypothetical pr... 46 0.005
BC135310_1(BC135310|pid:none) Xenopus tropicalis hypothetical pr... 46 0.005
FM992689_467(FM992689|pid:none) Candida dubliniensis CD36 chromo... 46 0.006
CR382123_532(CR382123|pid:none) Kluyveromyces lactis strain NRRL... 45 0.008
AL731585_8(AL731585|pid:none) Oryza sativa genomic DNA, chromoso... 45 0.011
CR380951_273(CR380951|pid:none) Candida glabrata strain CBS138 c... 45 0.014
AM494948_15(AM494948|pid:none) Leishmania braziliensis chromosom... 44 0.019
BC166335_1(BC166335|pid:none) Xenopus tropicalis hypothetical pr... 44 0.032
AC141322_21(AC141322|pid:none) Medicago truncatula clone mth2-8e... 43 0.042
CR382135_218(CR382135|pid:none) Debaryomyces hansenii strain CBS... 42 0.094
AM479964_2(AM479964|pid:none) Vitis vinifera contig VV78X057791.... 42 0.094
BT068417_1(BT068417|pid:none) Zea mays full-length cDNA clone ZM... 40 0.36
CR954211_14(CR954211|pid:none) Ostreococcus tauri strain OTTH059... 40 0.36
AM502229_47(AM502229|pid:none) Leishmania infantum chromosome 11. 40 0.36
(Q54N40) RecName: Full=Putative peroxisome assembly protein 12; ... 40 0.47
AM426654_1(AM426654|pid:none) Vitis vinifera contig VV78X132516.... 40 0.47
AY373525_1(AY373525|pid:none) Trypanosoma cruzi pumilio protein ... 39 0.61
AJ719494_1(AJ719494|pid:none) Gallus gallus mRNA for hypothetica... 38 1.4
CT005264_246(CT005264|pid:none) Leishmania major strain Friedlin... 38 1.8
M22646_1(M22646|pid:none) Pig apolipoprotein B gene (Lpb), exons... 37 2.3
JT0382(JT0382;I46567;I46568)apolipoprotein B - pig (fragments) 37 2.3
A96747(A96747) probable RNA-binding domain T10D10.21 [imported] ... 37 2.3
M20383_1(M20383|pid:none) Sus scrofa apolipoprotein B (allele Lp... 37 2.3
AE014186_95(AE014186|pid:none) Plasmodium falciparum 3D7 chromos... 37 2.3
CP000109_1151(CP000109|pid:none) Thiomicrospira crunogena XCL-2,... 37 3.0
AL031745_34(AL031745|pid:none) Plasmodium falciparum DNA from MA... 37 3.0
AL844501_43(AL844501|pid:none) Plasmodium falciparum strain 3D7,... 37 3.0
AC116956_10(AC116956|pid:none) Dictyostelium discoideum chromoso... 37 3.0
AL844505_253(AL844505|pid:none) Plasmodium falciparum 3D7 chromo... 37 3.0
AL035475_43(AL035475|pid:none) Plasmodium falciparum MAL4P2. &A... 37 3.9
U85963_1(U85963|pid:none) Plasmodium falciparum asparagine-rich ... 37 3.9
AM502243_249(AM502243|pid:none) Leishmania infantum chromosome 25. 37 3.9
CR382133_530(CR382133|pid:none) Debaryomyces hansenii strain CBS... 37 3.9
CR382135_96(CR382135|pid:none) Debaryomyces hansenii strain CBS7... 36 5.1
S43574(S43574)C05B5.3 protein (clone C05B5) - Caenorhabditis ele... 36 5.1
(P34291) RecName: Full=Prion-like-(Q/N-rich) domain-bearing prot... 36 5.1
AC135795_8(AC135795|pid:none) Medicago truncatula clone mth2-28g... 36 5.1
AE017196_868(AE017196|pid:none) Wolbachia endosymbiont of Drosop... 36 6.7
CP001391_770(CP001391|pid:none) Wolbachia sp. wRi, complete geno... 36 6.7
AJ557136_1(AJ557136|pid:none) Candida glabrata kap122 gene for p... 36 6.7
BX293980_567(BX293980|pid:none) Mycoplasma mycoides subsp. mycoi... 36 6.7
CP000387_7(CP000387|pid:none) Streptococcus sanguinis SK36, comp... 36 6.7
CP000227_1925(CP000227|pid:none) Bacillus cereus Q1, complete ge... 35 8.8
(Q54QR1) RecName: Full=LIM domain-containing protein A; 35 8.8
AE017194_2095(AE017194|pid:none) Bacillus cereus ATCC 10987, com... 35 8.8
AC091330_27(AC091330|pid:none) Trypanosoma brucei chromosome 3 c... 35 8.8
AE014185_307(AE014185|pid:none) Plasmodium falciparum 3D7 chromo... 35 8.8
CP000001_1822(CP000001|pid:none) Bacillus cereus E33L, complete ... 35 8.8
>AE017343_431(AE017343|pid:none) Cryptococcus neoformans var.
neoformans JEC21 chromosome 3, complete sequence.
Length = 948
Score = 180 bits (456), Expect = 2e-43
Identities = 100/248 (40%), Positives = 155/248 (62%), Gaps = 7/248 (2%)
Frame = +3
Query: 1464 QRRQIVDKIAPSVETFACHVYGIHGIQKLLQYLS----PGQVESIIASIKGKVIQLSKDN 1631
QR I+D +A + + +++G +QK++ +L+ P Q+ ++I ++ V+ L KD
Sbjct: 511 QRSAIIDSVANDLVGISLNMHGTRAVQKMVDFLAQPRQPKQIRTLILALSMNVVALIKDL 570
Query: 1632 KGNYLIQSFLKQFSPEVNQFVCDAIMGNIEEICTHKVGCTVVNRCIDNANPEQLEKLVDK 1811
GN++IQ L + PE NQF+ +AI N+ E+ TH+ GC V+ R ID+A+P Q +LV +
Sbjct: 571 NGNHVIQKCLNKLIPEDNQFIYNAIAANLIEVATHRHGCCVLQRSIDHASPAQRMQLVTE 630
Query: 1812 ITEHSLKLVQDQFGNYVVQHLLSKNKA-YSSKLIVSLKDNIAELSIQKFSSNVIEKCLQL 1988
I +SL LVQD FGNYV+Q++L N A +S LI + N+ LS+QKFSSNV+EKC+++
Sbjct: 631 IIFNSLYLVQDPFGNYVIQYILDLNDARFSEPLIRTFIGNVCSLSVQKFSSNVVEKCIRV 690
Query: 1989 ADTPTYELII-KALTEADILSLLQDKYANFVIQTALDVSNDTQHAKLVKIIVPYIHQIK- 2162
AD ++++ + L + + LL+D Y N+VIQT LD Q LV+ I P + I+
Sbjct: 691 ADPEIRKVLVGEVLNRSRLEKLLRDSYGNYVIQTILDYCEIGQRMVLVECIRPILPSIRN 750
Query: 2163 TPYVIHIQ 2186
TPY IQ
Sbjct: 751 TPYGKRIQ 758
Score = 67.4 bits (163), Expect = 2e-09
Identities = 49/211 (23%), Positives = 101/211 (47%), Gaps = 5/211 (2%)
Frame = +3
Query: 1524 YGIHGIQKLLQYLSPGQVESIIASIKGKVIQLSKDNKGNYLIQSFLKQFSPEVNQFVCDA 1703
+G +QK L+ P + I G +L D GNYL Q L+ + E + D+
Sbjct: 459 HGCRYLQKKLEDGDPKHRDMIFNETYGHFPELMTDPFGNYLCQKLLEYSTEEQRSAIIDS 518
Query: 1704 IMGNIEEICTHKVGCTVVNRCID----NANPEQLEKLVDKITEHSLKLVQDQFGNYVVQH 1871
+ ++ I + G V + +D P+Q+ L+ ++ + + L++D GN+V+Q
Sbjct: 519 VANDLVGISLNMHGTRAVQKMVDFLAQPRQPKQIRTLILALSMNVVALIKDLNGNHVIQK 578
Query: 1872 LLSKNKAYSSKLIV-SLKDNIAELSIQKFSSNVIEKCLQLADTPTYELIIKALTEADILS 2048
L+K ++ I ++ N+ E++ + V+++ + A +P + + + L
Sbjct: 579 CLNKLIPEDNQFIYNAIAANLIEVATHRHGCCVLQRSIDHA-SPAQRMQLVTEIIFNSLY 637
Query: 2049 LLQDKYANFVIQTALDVSNDTQHAKLVKIIV 2141
L+QD + N+VIQ LD+++ L++ +
Sbjct: 638 LVQDPFGNYVIQYILDLNDARFSEPLIRTFI 668
Score = 55.5 bits (132), Expect = 8e-06
Identities = 34/147 (23%), Positives = 74/147 (50%), Gaps = 7/147 (4%)
Frame = +3
Query: 1677 EVNQFV---CDAIMGNIEEICTHKVGCTVVNRCIDNANPEQLEKLVDKITEHSLKLVQDQ 1847
E N+F + + G + +C + GC + + +++ +P+ + + ++ H +L+ D
Sbjct: 435 EFNRFAGVRIEDLKGELLSLCKDQHGCRYLQKKLEDGDPKHRDMIFNETYGHFPELMTDP 494
Query: 1848 FGNYVVQHLLS-KNKAYSSKLIVSLKDNIAELSIQKFSSNVIEKCLQLADTPTYELIIKA 2024
FGNY+ Q LL + S +I S+ +++ +S+ + ++K + P I+
Sbjct: 495 FGNYLCQKLLEYSTEEQRSAIIDSVANDLVGISLNMHGTRAVQKMVDFLAQPRQPKQIRT 554
Query: 2025 LTEA---DILSLLQDKYANFVIQTALD 2096
L A ++++L++D N VIQ L+
Sbjct: 555 LILALSMNVVALIKDLNGNHVIQKCLN 581
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 3,158,469,277
Number of extensions: 58952888
Number of successful extensions: 188209
Number of sequences better than 10.0: 246
Number of HSP's gapped: 186038
Number of HSP's successfully gapped: 573
Length of query: 738
Length of database: 1,040,966,779
Length adjustment: 136
Effective length of query: 602
Effective length of database: 605,184,019
Effective search space: 364320779438
Effective search space used: 364320779438
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
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