Dictyostelium discoideum cDNA Contig-U10970-1

Assembled

Chromosomal Location of Contig-U10970-1

Sequence Contig-U10970-1

AATTAACTTC TAATCAAACT TTATTTTAAT TCCATTTTAT TATTATCATT
TTAAATATAT TTATTTAATA AAAAAAAACA AAAAAAAACA AAAAAAAAAA
GGANGGCGGG TA-------- --ATTTTTAT TTTTAATTTA AAAGTTTATT
TTTATATTTA TTTTTATTTA TTTATTTTTA TTTATTTATT TTATTTATTT
TATTTATACA CAATACATAT AAAAGATGGC AGGTAAAGAT TGGGAAATAG
TACAAGAAAA AGCATTTACT GCATGGGTAA ATTCAGTTTT AGATAAAAGA
GGTGAAAAGA TTTCAGATGT CGGTAAAGAC TTGAGTGATG GTGTCAAATT
AATCTTCTTT TTGGAACTCA TCAGTAGCAA AAAGTTTAAT AAAAAGTATG
ATTTTGAACC AAAAGCTCGT ATTAATATGA TTCAAAATGT TGCACTTGCT
CTTAAATTCC TTGATGAAGA ATTAAAGATT AAAGTTCAAG GTATTGGTTC
AGAAGATTTT GTTGATAATA ATAAAAAAAT GATTTTAGGT TTTTTATGGA
CATTATATCG TAAATATCGT ATTGCTGTTA TTAGTGAAGG TGATAAATCA
TCAGAAGAAG GTTTATTATT ATGGTGTAAG AATACTACCA CTGGTTATGA
TGGTGTCAAT ATTACATCAT TCACCAAATC ATTCCGTGAT GGTTTAGCAT
TTTTAGCACT CTCACATAAA TTTGAACCAG AATCATTCAA ATTCCAAGAG
TTTGAAGCAA TGGACCCAAT TGCTCGTTTA AACGCTGCAT TTGATTTCGC
CGAAAAAGGA TTAGGTGTAC CAAAACTCTT GGAAGCTGAA GAGGTTATGC
GTGGTACCAC TGATGAACGT TCACTCGTTC TCTACACATC TTTATTCTTC
CATGCCTATA GAGCCAAGGA AGAGAAAGCT CGTTTAGAGA GTAGCAAAAA
TGAAATGGCA AATCGTTTAG CCGGTTTAGA GAATTCATTG GAATCTGAAA
AGGTCTCACG TGAACAATTA ATCAAACAAA AGGATCAACT CAATAGTTTA
TTGGCATCAT TAGAGTCCGA AGGTGCTGAA CGTGAAAAGA GACTTCGTGA
ATTGGAAGCC AAACTCGATG AAACCTTAAA GAACTTGGAA TTAGAGAAAT
TGGCTCGTAT GGAACTCGAA GCAAGATTAG CCAAGACCGA AAAGGATAGA
GCTATCTTGG AATTGAAATT AGCTGAAGCC ATCGATGAAA AATCAAAACT
CGAACAACAA ATCGAAGCCA CCAGAATCAG AGGTGCTGCT GAAGCTCAAG
GTCTTGGTCT CTTAAGAAAG AACCTCGACA CTCACGTTCA CGATTTACTC
AAATGGCAAA AGTTAACAAT GGAAAACTCT TCCTCATCCT CTATCGATGA
CCAAATCATC GTCGAAGTCT CTGGTCTTCC ATTTGGTGAA CAAGTTAAAC
ATTTAGCCAC AAAATTAGAA GCAGAAAATT TAGCAATTAT GAAACTTTTA
AATCAAAAAG AAGATGATTT AAAAGCTCAA AAATTAAAAT CATCAAAATC
AAAAAAATAA ATTAAAAAAA TAATAATAAC CAAAAAAAAA AAAAAAAAAA
AAAAAATCAT ATAATAATCT ATT

Translated Amino Acid Sequence Contig-U10970-1

inf*SNFILIPFYYYHFKYIYLIKKNKKKQKKKGXRV---

---IFIFNLKVYFYIYFYLFIFIYLFYLFYLYTIHIKDGR*rlgnstrksiycmgkfsfr
*kr*kdfrcr*rle*wcqinllfgthq*qkv**kv*f*tkssy*ydskcctcs*ip**ri
kd*ssrywfrrfc****kndfrffmdiis*isyccy**r**iirrrfiimv*eyyhwl*w
cqyyiihqiip*wfsifstlt*i*triiqiprv*sngpncsfkrci*frrkrirctktlg
s*rgyawyh**tftrslhifilpcl*sqgressfre*qk*ngksfsrfrefigi*kglt*
tinqtkgstq*figiirvrrc*t*kets*igsqtr*nlkelgireigsygtrskisqdrk
g*sylgieis*shr*kiktrttnrshqnqrcc*ssrswslkkeprhsrsrftqmakvnng
klflilyr*pnhrrslwssiw*ts*tfshkirsrkfsnyetfkskrr*fksskikiikik
kin*knnnnqkkkkkkknhiiiy

Homology Contig-U10970-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U10970-1 (Contig-U10970-1Q) /CSM_Contig/Conti...  2506  0.0
Contig-U09803-1 (Contig-U09803-1Q) /CSM_Contig/Conti...   176  5e-44
Contig-U12095-1 (Contig-U12095-1Q) /CSM_Contig/Conti...    40  0.007
Contig-U14022-1 (Contig-U14022-1Q) /CSM_Contig/Conti...    38  0.029
Contig-U11749-1 (Contig-U11749-1Q) /CSM_Contig/Conti...    38  0.029
Contig-U10553-1 (Contig-U10553-1Q) /CSM_Contig/Conti...    36  0.12
Contig-U08411-1 (Contig-U08411-1Q) /CSM_Contig/Conti...    36  0.12
Contig-U14366-1 (Contig-U14366-1Q) /CSM_Contig/Conti...    34  0.46
Contig-U12403-1 (Contig-U12403-1Q) /CSM_Contig/Conti...    34  0.46
Contig-U12075-1 (Contig-U12075-1Q) /CSM_Contig/Conti...    34  0.46

Homology Contig-U10970-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(L49527) Dictyostelium discoideum cortexillin I mRNA, comple...  1907   0.0    2
(BJ430573) Dictyostelium discoideum cDNA clone:ddv7c22, 3' e...  1378   0.0    1
(BJ432927) Dictyostelium discoideum cDNA clone:ddv20c10, 3' ...  1346   0.0    1
(BJ343573) Dictyostelium discoideum cDNA clone:dda16b13, 3' ...  1289   0.0    1
(BJ344386) Dictyostelium discoideum cDNA clone:dda19h05, 3' ...  1277   0.0    1
(BJ400866) Dictyostelium discoideum cDNA clone:dds15l03, 3' ...  1271   0.0    1
(AU034878) Dictyostelium discoideum slug cDNA, clone SLE631.     1265   0.0    1
(BJ399112) Dictyostelium discoideum cDNA clone:dds4o05, 3' e...  1265   0.0    1
(BJ377513) Dictyostelium discoideum cDNA clone:ddc24k21, 3' ...  1261   0.0    1
(BJ341897) Dictyostelium discoideum cDNA clone:dda8k16, 3' e...  1247   0.0    2

Homology Contig-U10970-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q9Y0T4) RecName: Full=Cortexillin-1; AltName: Full=Cortexillin ...   679   0.0
L08068_1(L08068|pid:none) Physarum polycephalum actin-binding pr...   325   4e-87
FADOAA(S00103;A29006) alpha-actinin - slime mold (Dictyostelium ...   186   2e-45
AK304554_1(AK304554|pid:none) Homo sapiens cDNA FLJ58087 complet...   185   5e-45
(Q9QXQ0) RecName: Full=Alpha-actinin-4; AltName: Full=Non-muscle...   185   5e-45
CR361558_3(CR361558|pid:none) Zebrafish DNA sequence from clone ...   185   5e-45
D89980_1(D89980|pid:none) Homo sapiens mRNA for alpha actinin 4,...   185   5e-45
(Q5RCS6) RecName: Full=Alpha-actinin-4; AltName: Full=Non-muscle...   185   5e-45
(O43707) RecName: Full=Alpha-actinin-4; AltName: Full=Non-muscle...   185   5e-45
AK299955_1(AK299955|pid:none) Homo sapiens cDNA FLJ61380 complet...   185   5e-45