Dictyostelium discoideum cDNA Contig-U10933-1

Assembled

Chromosomal Location of Contig-U10933-1

NO HIT FOUND.

Sequence Contig-U10933-1

TTCTCAACAG TTACCATCCC AAAACATTAA ACCAGTCTTA CCATCATCTT
CTCAATCGTC CGATTATGAA AAACAAAAAT CAAATAATGT AGTTAACGAA
AAAACGCAAG AACAACAACA ACAACAAGAA CTACAACAAG AACTACAACA
AGAACAAGAA CAACTACGAC ATCAAGAGCA ACAACAAGAA CAACAACAAC
CCTCAAATAT ATCCCCCAGA CTACGACATC AAGAACAACA ACGACAACAA
GAACAACAAC GACAACAAGA ACAAGAACAA CAACAACAAC AACAAAAACA
ACAACAACAA CAAACCTCAA ATATCTCCTC CAGACAAATA AAACAAGAAA
ACTCACAACA TACACCACAT AAAACAACAA CCGAAACATC AATAATACGA
ATCAATGCTG TTTTCAATAC AAAACAACAG CAATCTGTTG ATTCTGAAAC
AAAAGGTGGT GATAATCTTA AAACTGGAGT TGAAGCACTT GATAAAACTC
CTGGTGAAGA TGAAATTAAT CAATCTATGG GCCAAAACAA CCTCAAGGCT
CTTATTTCCA AATCTCAAAT GGAAAATCAA CATTTACCTT TAGATGGTGA
AACAAAAGGT GGTGATAATC TTAAAACTGG AGTTGAAGCA CTTGATAAAA
CTNCTGGGGG AAGATGAAAT TAATCAATCT ATGGGCAAAA ACAACCTCA-
---------G TATATTTCAC ACATCTAGAA AGATGTAGTT TATCTTCCAT
ACCACACAAA AAGAAAATTG ATTTTACTTT ACAAACTGGA TCTTCAAAAT
TTGGTGGTCT ACGTGGAGCA TTTGCAATTT GTTCCGATAC TTCAACTTTT
GAAGATCCAG TTTGTAAAGT AAAATCAATT TTCTTTTTGT GTGGTATGGA
AGATAAACTA CATCTTTCTA GATGTGTGAA ATATACTCCA TACAAAGATG
AATGGTCCTT CATGCCACCC CACAAAACAT AAGCGTGCAT GTGTTGCGGA
TGCTGGTGTA TTGGCAAATG GTATAATCTA TATTTTTGGT GGAAATGATA
GTTTAGAAAC CTACGAAAAG TTTAATATAC ATACAAATAA ATGGGAAAAT
GGAGGCAGTA TTCCCAATGG TGGAGGTTCT TCAATGTCGG CAACCTATGA
CAAGAAAAAC AATTGCATCT ATTTAATTGG TGGTGTTAAA TTTAATCAAA
CATCAGCCAA AATCGAAAAG TGTACATTTA CACAAAATGG TTCATTACAT
TTTACAACAT TGGTATCTTT AATTCATCCA CGTTATTATT GTTTCACCAT
TTTACATAAT GATAGTTTGT ATATTATAGG TGGCACAAAT AAAACCAAAG
AAGAATCTTA TTTCTCAATC ATCAACAATA TCGAAGTTTT AGATTTAAAA
ACAAACAAAA TCAAAGTACT CTACGACAAA TTAGATAAAA GCGAAAATAG
AATTGAAGGT GTTTGCTTTG ATGGTGAAAA TTTTTTCATT ATAACCATTG
ATTCATTTTT CACTTTAAAT TTATATAACT TTGAAATTCA TCATTTAGCC
TATCCACCAA TTACCACCAT GAGATTCGGT TTTTCAATGA CAATTGGAAA
AGATGAATCT TATCCACCTT CCGAACAAAA TATTATATAT CTGGTTGGTG
ATAGAAGCAC AACTCATTTC AAATATCATA TATCTTCAAA TACATGGTCT
GCTTCACCAT CGAGACGACC CATAAGTTCC TACTTTCATG CTGCGGT

Translated Amino Acid Sequence Contig-U10933-1

lnsyhpktlnqsyhhllnrpimknknqim*ltkkrknnnnnknynknynknknnydiksn
nknnnnpqiyppdydiknnndnknnndnknknnnnnnknnnnnkpqisppdk*nkkthni
hhikqqpkhq*yesmlfsiqnnsnllilkqkvviilklelkhlikllvkmklinlwaktt
srllfpnlkwkiniyl*MVKQKVVIILKLELKHLIKLLGEDEINQSMGKNNL---

---VYFTHLERCSLSSIPHKKKIDFTLQTGSSKFGGLRGAFAICSDTSTFEDPVCKVKSI
FFLCGMEDKLHLSRCVKYTPYKDEWSFMPPHKT*acmccgcwcigkwynlyfwwk**frn
lrkv*ytyk*mgkwrqysqwwrffnvgnl*qekqlhlfnwwc*i*snisqnrkvyiytkw
fitfynigifnsstlllfhhft***fvyyrwhk*nqrrilflnhqqyrsfrfknkqnqst
lrqir*krk*n*rcll*w*kffhynh*fifhfkfi*l*nssfslstnyhheirffndnwk
r*ilstfrtkyyisgw**khnsfqisyifkymvcftietthkfllsccg

Homology Contig-U10933-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U10933-1 (Contig-U10933-1Q) /CSM_Contig/Conti...  2773  0.0
Contig-U12657-1 (Contig-U12657-1Q) /CSM_Contig/Conti...    38  0.031
Contig-U11087-1 (Contig-U11087-1Q) /CSM_Contig/Conti...    38  0.031
Contig-U03225-1 (Contig-U03225-1Q) /CSM_Contig/Conti...    38  0.031
Contig-U12417-1 (Contig-U12417-1Q) /CSM_Contig/Conti...    36  0.12
Contig-U11657-1 (Contig-U11657-1Q) /CSM_Contig/Conti...    36  0.12
Contig-U10909-1 (Contig-U10909-1Q) /CSM_Contig/Conti...    36  0.12
Contig-U06918-1 (Contig-U06918-1Q) /CSM_Contig/Conti...    36  0.12
Contig-U01681-1 (Contig-U01681-1Q) /CSM_Contig/Conti...    36  0.12
Contig-U13208-1 (Contig-U13208-1Q) /CSM_Contig/Conti...    34  0.49

Homology Contig-U10933-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ405250) Dictyostelium discoideum cDNA clone:dds31g03, 3' ...  1582   0.0    1
(BJ356369) Dictyostelium discoideum cDNA clone:dda60i02, 3' ...  1511   0.0    1
(BJ343848) Dictyostelium discoideum cDNA clone:dda17k10, 3' ...  1370   0.0    1
(AU061067) Dictyostelium discoideum slug cDNA, clone SLC805.      515   0.0    3
(BJ326641) Dictyostelium discoideum cDNA clone:dda17k10, 5' ...   593   0.0    3
(AC153051) Bos taurus clone CH240-21N16, WORKING DRAFT SEQUE...    36   0.18   2
(AC184527) Strongylocentrotus purpuratus clone R3-4019K2, WO...    38   0.88   5
(CU179717) Zebrafish DNA sequence from clone CH211-207L14 in...    48   1.2    1
(BX323009) Zebrafish DNA sequence from clone DKEYP-70D5 in l...    48   1.2    1
(BX005314) Zebrafish DNA sequence from clone CH211-155D24 in...    48   1.2    1

Homology Contig-U10933-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


DQ437593_33(DQ437593|pid:none) Cowpox virus strain Germany 91-3,...    59   6e-07
(Q8JLI4) RecName: Full=Kelch repeat protein C2;  &AF012825_18(AF...    58   9e-07
AY965324_1(AY965324|pid:none) Synthetic construct clone VACV-WR_...    58   1e-06
(P17371) RecName: Full=Kelch repeat protein C2;  &AY243312_26(AY...    58   1e-06
DQ121394_27(DQ121394|pid:none) Vaccinia virus strain Lister clon...    57   2e-06
(P87617) RecName: Full=Kelch repeat protein C2;  &X94355_32(X943...    57   2e-06
(Q776A6) RecName: Full=Kelch repeat protein C2;  &(Q8V2Z3) RecNa...    56   4e-06
(Q6RZS3) RecName: Full=Kelch repeat protein C2;  &AY484669_18(AY...    56   4e-06
DQ439815_35(DQ439815|pid:none) Vaccinia virus strain DUKE, compl...    56   5e-06
AF482758_35(AF482758|pid:none) Cowpox virus strain Brighton Red,...    55   1e-05