Dictyostelium discoideum cDNA Contig-U10875-1

Assembled

Chromosomal Location of Contig-U10875-1

Sequence Contig-U10875-1

ATATAGTGGA GATAATTCAC CAACTCTATC ACGTAATCAT CATGACGAAA
TAGGGCACCT TCAATATACA GCCAATCATC ATATAGCAAC TAGTCATCAT
AGTCATAGTC ATAACCATAA TCATAATCAC AATCATCAAT TAACACAACC
AATTCAACAA CAACAACAAA CACAACATGT AAATTTAGCA TCAAACAATT
ATTATATAAG ACATATTTAT ACAAACAATC AATATGATGA AACAACACAA
ATCGTTATGA ATAATGGTAT ACCATTTATA TATAATCCAA ATGCACGTAA
AATATTTGGA GTACCATTGA CTCAGGTACC ATGTAGAGCG GGTTCAAATG
TACCAATAAT CATCGAAAAA CTCATTGATC ATATAGAGAG AACATCATTG
AATTCCGAGG GTTTATTTCG TATACCCGGT GTGGATTTAA CAATCAATCA
ATATATAAAA CTATTCGATA ATGGTGAAGA TGTTGATGTC TCTCCCATAG
AACCCTATAC AGCTGCAGGT CTATTGAAAA GATTCTTTAG AGATTTACCT
GTATTCGTAC CACAATCAAT CAATAAACGT GTGGTATCAT TATTCATTGA
TGAAGAAGGC AAAAAGAAAC CTGTCGATAT GGAAATACTT AGCAATTTAC
GTGTATTGGT GCATCAATTA CCAACTGTAC ATTTTGAAGT AATGCAAGAA
TTAACAAATC TCTTAGGTAA ACTTATGAGT AGATCCGATC AAAATAAAAT
GACAATTTCA AATATTGCCA TTTGTTTAGT ACCAACCCTA AATTGTGTAC
CTGCAATCGT TACCTATTCA ATTCAAATGC ACGATTTCTT TTATAATGAA
GTTTTTCCAC AACATCATCT TTACTATATG AGACCATATG AAGAGAAATT
AGTAGAGTCT GCTCCAACTC AACCAATCAA TATTATGACA ACAAGTGGTG
GTGAGAAAAG ATATTCAAGT AGACCTGCTT CTATTACTAT CTCTGGTTTA
TTACCCTCAA ATGGTCAAAA TAATAGTCCT TCCTCTTCAA CTATCACTTC
AACTACAATC ACATCTCCAC ATGATTCTAC TGCTCCAATT ACTTTTACTG
TTACTACTAC TTTTTCACCT GAACAACAAC AACAAATGTT ACAACAGCAG
CAACAACAAC AACAACAAAA TTCATCTAGA GTAGATGTAA TTAAATCTCA
ACGTTCTGCA CCTGTAGAAA TTACATTAAA TCCATCAGAG GTTGAAAATG
GTCAAGAAAT TGATGAAGAA CTTTTGAAAA AGAAATATGA ACAAGCAACA
CAAGCATTAC AGAAACAAAG ACCAAAAGAA GACATTAGTG ACATCATCGA
AGAACAAAAT AAAAAAAGAA AAAATCAATT ACAAAAAGAA GAAAAACAAA
AGAAATTCAA ATTTTAAAAA TTATCAAAAC GTTTTAATAA TATCAAATAA
TA-------- --TAGAGAGA ACATCATTGA ATTCCGAGGG TTTATTTCGT
ATACCCGGTG TGGATTTAAC AATCAATCAA TATATAAAAC TATTCGATAA
TGGTGAAGAT GTTGATGTCT CTCCCATAGA ACCCTATACA GCTGCAGGTC
TATTGAAAAG ATTCTTTAGA GATTTACCTG TATTCGTACC ACAATCAATC
AATAAACGTG TGGTATCATT ATTCATTGAT GAAGAAGGCA AAAAGAAACC
TGTCGATATG GAAATACTTA GCAATTTACG TGTATTGGTG CATCAATTAC
CAACTGTACA TTTTGAAGTA ATGCAAGAAT TAACAAATCT CTTAGGTAAA
CTTATGAGTA GATCCGATCA AAATAAAATG ACAATTTCAA ATATTGCCAT
TTGTTTAGTA CCAACCCTAA ATTGTGTACC TGCAATCGTT ACCTATTCAA
TTCAAATGCA CGATTTCTTT TATAATGAAG TTTTTCCACA ACATCATCTT
TACTATATGA GACCATATGA AGAGAAATTA GTAGAGTCTG CTCCAACTCA
ACCAATCAAT ATTATGACAA CAAGTGGTGG TGAGAAAAGA TATTCAAGTA
GACCTGCTTC TATTACTATC TCTGGTTTAT TACCCTCAAA TGGTCAAAAT
AATAGTCCTT CCTCTTCAAC TATCACTTCA ACTACAATCA CATCTCCACA
TGATTCTACT GCTCCAATTA CTTTTACTGT TACTACTACT TTTTCACCTG
AACAACAACA ACAAATGTTA CAACAGCAGC AACAACAACA ACAGCAACAA
GAAAAACAAT CATCATCATC TTTATCACAA TCACAACAAT CAATTCAACC
AATTAGTGAT ACAAACTCTA CAAAATCTGA TCGTAGAACC TTTAGAGTTG
ATCCAAATTT GGATTTAACT CAATACATAG AAGATACTCA ATATAATGTC
AATAGAAATT ATCTTTATAA TGGTGGACCA AGTGGTACTA CTGGTACAAC
TCCAAATGGT GGTTCTCTTA GTATTGGTGG TGGTAATGGT GGTAATGGTG
GTAGTTCTCT TAGTGTTGGC AGTGGTGGTG GTAATGGAGG TAGTTCTCTT
AGCGTTGGTA GTAATACAAG TGTTGGCGTT GGTGGTGGTG GTGGTGGTAA
TAATACAACT GATCAATCTA AAATCTATAG AAGAAGTGTT GCATATACAA
ACAATGAAGA TACAAAAGCT G

Translated Amino Acid Sequence Contig-U10875-1

iveiihqlyhviimtk*gtfniqpiii*qlviivivitiiiitiin*hnqfnnnnkhnm*
i*hqtiii*difiqtinmmkqhksl*imvyhlyiiqmhvkyleyh*lryhvervqmyq*s
sknslii*rehh*iprvyfvypvwi*qsini*nysimvkmlmslp*npiqlqvy*kdsle
iylysyhnqsinvwyhyslmkkakrnlsiwkylaiyvywcinyqlyilk*ckn*qis*vn
l*vdpikik*qfqilpfv*yqp*ivylqslpiqfkctisfimkffhniifti*dhmkrn*
*sllqlnqsil*qqvvvrkdiqvdlllllslvyypqmvkiivlplqlslqlqshlhmill
lqllllllllfhlnnnnkcynssnnnnnkihle*m*lnlnvlhl*klh*ihqrlkmvkkl
mknf*KRNMNKQHKHYRNKDQKKTLVTSSKNKIKKEKINYKKKKNKRNSNFKNYQNVLII
SNN---

---ERTSLNSEGLFRIPGVDLTINQYIKLFDNGEDVDVSPIEPYTAAGLLKRFFRDLPVF
VPQSINKRVVSLFIDEEGKKKPVDMEILSNLRVLVHQLPTVHFEVMQELTNLLGKLMSRS
DQNKMTISNIAICLVPTLNCVPAIVTYSIQMHDFFYNEVFPQHHLYYMRPYEEKLVESAP
TQPINIMTTSGGEKRYSSRPASITISGLLPSNGQNNSPSSSTITSTTITSPHDSTAPITF
TVTTTFSPEQQQQMLQQQQQQQQQQEKQSSSSLSQSQQSIQPISDTNSTKSDRRTFRVDP
NLDLTQYIEDTQYNVNRNYLYNGGPSGTTGTTPNGGSLSIGGGNGGNGGSSLSVGSGGGN
GGSSLSVGSNTSVGVGGGGGGNNTTDQSKIYRRSVAYTNNEDTKA

Homology Contig-U10875-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U10875-1 (Contig-U10875-1Q) /CSM_Contig/Conti...  1869  0.0
Contig-U12435-1 (Contig-U12435-1Q) /CSM_Contig/Conti...    52  3e-06
Contig-U12585-1 (Contig-U12585-1Q) /CSM_Contig/Conti...    48  5e-05
Contig-U13486-1 (Contig-U13486-1Q) /CSM_Contig/Conti...    44  8e-04
Contig-U13433-1 (Contig-U13433-1Q) /CSM_Contig/Conti...    44  8e-04
Contig-U09111-1 (Contig-U09111-1Q) /CSM_Contig/Conti...    44  8e-04
Contig-U04975-1 (Contig-U04975-1Q) /CSM_Contig/Conti...    44  8e-04
Contig-U14278-1 (Contig-U14278-1Q) /CSM_Contig/Conti...    42  0.003
Contig-U12472-1 (Contig-U12472-1Q) /CSM_Contig/Conti...    42  0.003
Contig-U03259-1 (Contig-U03259-1Q) /CSM_Contig/Conti...    40  0.012

Homology Contig-U10875-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AF474341) Dictyostelium discoideum ABC transporter ABCC.9 (...  1871   0.0    1
(BJ323743) Dictyostelium discoideum cDNA clone:dda12d06, 5' ...  1362   0.0    1
(BJ427801) Dictyostelium discoideum cDNA clone:ddv63l13, 5' ...  1265   0.0    1
(BJ371269) Dictyostelium discoideum cDNA clone:ddc57f10, 5' ...  1257   0.0    1
(BJ335034) Dictyostelium discoideum cDNA clone:dda48n18, 5' ...  1237   0.0    1
(BJ339055) Dictyostelium discoideum cDNA clone:dda63p22, 5' ...  1160   0.0    1
(BJ331553) Dictyostelium discoideum cDNA clone:dda35j19, 5' ...  1146   0.0    1
(AU267565) Dictyostelium discoideum vegetative cDNA clone:VS...   789   0.0    2
(AU267564) Dictyostelium discoideum vegetative cDNA clone:VS...  1023   0.0    1
(BJ397270) Dictyostelium discoideum cDNA clone:dds45o16, 5' ...   846   0.0    2

Homology Contig-U10875-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


AP007167_104(AP007167|pid:none) Aspergillus oryzae RIB40 genomic...    96   5e-18
(Q15311) RecName: Full=RalA-binding protein 1;          Short=Ra...    91   2e-16
AM270251_33(AM270251|pid:none) Aspergillus niger contig An11c034...    89   8e-16
BC145320_1(BC145320|pid:none) Mus musculus ralA binding protein ...    87   3e-15
(Q9PT60) RecName: Full=RalA-binding protein 1-A;          Short=...    86   7e-15
BC070617_1(BC070617|pid:none) Xenopus laevis hypothetical protei...    86   7e-15
AJ252165_1(AJ252165|pid:none) Xenopus laevis partial mRNA for Ra...    86   7e-15
AF029913_1(AF029913|pid:none) Cochliobolus heterostrophus GTPase...    85   2e-14
AK295649_1(AK295649|pid:none) Homo sapiens cDNA FLJ54686 complet...    85   2e-14
AF027687_1(AF027687|pid:none) Cochliobolus heterostrophus GTPase...    85   2e-14