Homology Contig-U10875-1 vs DNA
Query= Contig-U10875-1 (Contig-U10875-1Q) /CSM_Contig/Contig-U10875-1Q.Seq.d
(2671 letters)
Database: ddbj_A
108,600,042 sequences; 106,710,029,556 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(AF474341) Dictyostelium discoideum ABC transporter ABCC.9 (... 1871 0.0 1
(BJ323743) Dictyostelium discoideum cDNA clone:dda12d06, 5' ... 1362 0.0 1
(BJ427801) Dictyostelium discoideum cDNA clone:ddv63l13, 5' ... 1265 0.0 1
(BJ371269) Dictyostelium discoideum cDNA clone:ddc57f10, 5' ... 1257 0.0 1
(BJ335034) Dictyostelium discoideum cDNA clone:dda48n18, 5' ... 1237 0.0 1
(BJ339055) Dictyostelium discoideum cDNA clone:dda63p22, 5' ... 1160 0.0 1
(BJ331553) Dictyostelium discoideum cDNA clone:dda35j19, 5' ... 1146 0.0 1
(AU267565) Dictyostelium discoideum vegetative cDNA clone:VS... 789 0.0 2
(AU267564) Dictyostelium discoideum vegetative cDNA clone:VS... 1023 0.0 1
(BJ397270) Dictyostelium discoideum cDNA clone:dds45o16, 5' ... 846 0.0 2
(BJ343813) Dictyostelium discoideum cDNA clone:dda17d08, 3' ... 422 0.0 4
(BJ385088) Dictyostelium discoideum cDNA clone:ddc51d21, 3' ... 337 0.0 6
(BJ407969) Dictyostelium discoideum cDNA clone:dds44b10, 3' ... 391 e-178 2
(BJ340191) Dictyostelium discoideum cDNA clone:dda12d06, 3' ... 305 e-117 4
(BJ326623) Dictyostelium discoideum cDNA clone:dda17d08, 5' ... 270 e-100 2
(AU052425) Dictyostelium discoideum slug cDNA, clone SLD293. 371 1e-97 1
(GR569239) CBTF4444.b1 CBTF Dictyostelium purpureum 12 hr ve... 70 4e-28 7
(BJ345753) Dictyostelium discoideum cDNA clone:dda28p14, 3' ... 100 6e-16 1
(CE559673) tigr-gss-dog-17000312682211 Dog Library Canis lup... 40 0.20 3
(CL583905) OB__Ba0076F06.r OB__Ba Oryza brachyantha genomic ... 38 0.21 2
(CL592579) OB__Ba0052J05.r OB__Ba Oryza brachyantha genomic ... 38 0.23 2
(AC131106) Mus musculus chromosome 15 clone RP23-301M20, com... 48 1.1 6
(EK256466) 1095462012905 Global-Ocean-Sampling_GS-31-01-01-1... 38 1.2 2
(AC119811) Mus musculus chromosome 15, clone RP23-79P13, com... 48 1.9 1
(EK189450) 1095460013450 Global-Ocean-Sampling_GS-31-01-01-1... 48 1.9 1
(BU804588) haa49h08.y2 Fugu UT12 adult muscle Takifugu rubri... 36 3.1 2
(BZ479708) BONCW45TF BO_1.6_2_KB_tot Brassica oleracea genom... 36 3.4 2
(FP102960) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 34 3.5 7
(EL494244) C08_PFBAMHI-L-T3-PLATE8A.AB1 Blood stage Plasmodi... 36 3.7 2
(AG089750) Pan troglodytes DNA, clone: PTB-089B15.R. 36 3.9 2
(AM107294) Lutzomyia longipalpis EST clone NSFM-32f04, seque... 36 3.9 2
(FC833382) CBHI5022.fwd CBHI Metridium senile tentacle Metri... 36 4.0 2
(BZ465604) BONPJ57TR BO_1.6_2_KB_tot Brassica oleracea genom... 36 4.1 2
(EY806593) CR05-C3-702-067-B05-CT.F Mandarin fruit, developm... 36 4.3 2
(ET406388) S0176P13_T7 CHORI-214 Salmo salar genomic clone S... 36 4.7 2
(EK579338) 1095521398886 Global-Ocean-Sampling_GS-32-01-01-1... 42 5.0 2
(EK511511) 1095515481272 Global-Ocean-Sampling_GS-32-01-01-1... 42 5.1 2
(AC213507) Homo sapiens chromosome 16 clone ABC8_00004096630... 38 6.5 2
(BK006741) TPA_reasm: Francisella tularensis subsp. holarcti... 46 7.4 1
(AY871968) Synthetic construct hypothetical protein (FTT0079... 46 7.4 1
(AY774344) Synthetic construct Francisella tularensis clone ... 46 7.4 1
(AC186204) Canis Familiaris chromosome X, clone XX-300P9, co... 46 7.4 1
(AC105329) Rattus norvegicus clone CH230-136F16, *** SEQUENC... 46 7.4 1
(AC186065) Canis lupus familiaris chromosome X clone XX-152N... 46 7.4 1
(EK194764) 1095460034807 Global-Ocean-Sampling_GS-31-01-01-1... 46 7.4 1
(EK049351) 1092959676019 Global-Ocean-Sampling_GS-31-01-01-1... 46 7.4 1
(EH033920) Ss_Fwd2_20B09_T3 Forward subtracted library from ... 46 7.4 1
(DN788012) 93014129 Sea Urchin primary mesenchyme cell cDNA ... 46 7.4 1
(BB787475) Mus musculus testis Leydig cells CRL-2065 MLTC-1 ... 46 7.4 1
(BB786515) Mus musculus testis Leydig cells CRL-2065 MLTC-1 ... 46 7.4 1
(GR572411) CBTG711.b1 CBTG Dictyostelium purpureum 12 hr veg... 46 7.4 1
(CP000915) Francisella tularensis subsp. mediasiatica FSC147... 46 7.4 1
(CP000803) Francisella tularensis subsp. holarctica FTNF002-... 46 7.4 1
(CP000608) Francisella tularensis subsp. tularensis WY96-341... 46 7.4 1
(CP000439) Francisella tularensis subsp. novicida U112, comp... 46 7.4 1
(CP000437) Francisella tularensis subsp. holarctica OSU18, c... 46 7.4 1
(AM286280) Francisella tularensis subsp. tularensis strain F... 46 7.4 1
(AM233362) Francisella tularensis subsp. holarctica LVS comp... 46 7.4 1
(AJ749949) Francisella tularensis subsp. tularensis SCHU S4 ... 46 7.4 1
(EU475939) Staphylococcus xylosus strain DSM20267 translatio... 36 7.5 3
(AC234569) Homo sapiens chromosome 7 clone ABC14-50994400J21... 42 8.2 2
(DE007898) Branchiostoma floridae DNA, clone: CH302-014J22.R... 32 9.5 3
>(AF474341) Dictyostelium discoideum ABC transporter ABCC.9 (abcC9)
gene, complete cds.
Length = 8167
Score = 1871 bits (944), Expect = 0.0
Identities = 944/944 (100%)
Strand = Plus / Minus
Query: 178 tgtaaatttagcatcaaacaattattatataagacatatttatacaaacaatcaatatga 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7339 tgtaaatttagcatcaaacaattattatataagacatatttatacaaacaatcaatatga 7280
Query: 238 tgaaacaacacaaatcgttatgaataatggtataccatttatatataatccaaatgcacg 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7279 tgaaacaacacaaatcgttatgaataatggtataccatttatatataatccaaatgcacg 7220
Query: 298 taaaatatttggagtaccattgactcaggtaccatgtagagcgggttcaaatgtaccaat 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7219 taaaatatttggagtaccattgactcaggtaccatgtagagcgggttcaaatgtaccaat 7160
Query: 358 aatcatcgaaaaactcattgatcatatagagagaacatcattgaattccgagggtttatt 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7159 aatcatcgaaaaactcattgatcatatagagagaacatcattgaattccgagggtttatt 7100
Query: 418 tcgtatacccggtgtggatttaacaatcaatcaatatataaaactattcgataatggtga 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7099 tcgtatacccggtgtggatttaacaatcaatcaatatataaaactattcgataatggtga 7040
Query: 478 agatgttgatgtctctcccatagaaccctatacagctgcaggtctattgaaaagattctt 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7039 agatgttgatgtctctcccatagaaccctatacagctgcaggtctattgaaaagattctt 6980
Query: 538 tagagatttacctgtattcgtaccacaatcaatcaataaacgtgtggtatcattattcat 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6979 tagagatttacctgtattcgtaccacaatcaatcaataaacgtgtggtatcattattcat 6920
Query: 598 tgatgaagaaggcaaaaagaaacctgtcgatatggaaatacttagcaatttacgtgtatt 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6919 tgatgaagaaggcaaaaagaaacctgtcgatatggaaatacttagcaatttacgtgtatt 6860
Query: 658 ggtgcatcaattaccaactgtacattttgaagtaatgcaagaattaacaaatctcttagg 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6859 ggtgcatcaattaccaactgtacattttgaagtaatgcaagaattaacaaatctcttagg 6800
Query: 718 taaacttatgagtagatccgatcaaaataaaatgacaatttcaaatattgccatttgttt 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6799 taaacttatgagtagatccgatcaaaataaaatgacaatttcaaatattgccatttgttt 6740
Query: 778 agtaccaaccctaaattgtgtacctgcaatcgttacctattcaattcaaatgcacgattt 837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6739 agtaccaaccctaaattgtgtacctgcaatcgttacctattcaattcaaatgcacgattt 6680
Query: 838 cttttataatgaagtttttccacaacatcatctttactatatgagaccatatgaagagaa 897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6679 cttttataatgaagtttttccacaacatcatctttactatatgagaccatatgaagagaa 6620
Query: 898 attagtagagtctgctccaactcaaccaatcaatattatgacaacaagtggtggtgagaa 957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6619 attagtagagtctgctccaactcaaccaatcaatattatgacaacaagtggtggtgagaa 6560
Query: 958 aagatattcaagtagacctgcttctattactatctctggtttattaccctcaaatggtca 1017
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6559 aagatattcaagtagacctgcttctattactatctctggtttattaccctcaaatggtca 6500
Query: 1018 aaataatagtccttcctcttcaactatcacttcaactacaatcacatctccacatgattc 1077
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6499 aaataatagtccttcctcttcaactatcacttcaactacaatcacatctccacatgattc 6440
Query: 1078 tactgctccaattacttttactgttactactactttttcacctg 1121
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6439 tactgctccaattacttttactgttactactactttttcacctg 6396
Score = 1463 bits (738), Expect = 0.0
Identities = 738/738 (100%)
Strand = Plus / Minus
Query: 1463 tagagagaacatcattgaattccgagggtttatttcgtatacccggtgtggatttaacaa 1522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7133 tagagagaacatcattgaattccgagggtttatttcgtatacccggtgtggatttaacaa 7074
Query: 1523 tcaatcaatatataaaactattcgataatggtgaagatgttgatgtctctcccatagaac 1582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7073 tcaatcaatatataaaactattcgataatggtgaagatgttgatgtctctcccatagaac 7014
Query: 1583 cctatacagctgcaggtctattgaaaagattctttagagatttacctgtattcgtaccac 1642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7013 cctatacagctgcaggtctattgaaaagattctttagagatttacctgtattcgtaccac 6954
Query: 1643 aatcaatcaataaacgtgtggtatcattattcattgatgaagaaggcaaaaagaaacctg 1702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6953 aatcaatcaataaacgtgtggtatcattattcattgatgaagaaggcaaaaagaaacctg 6894
Query: 1703 tcgatatggaaatacttagcaatttacgtgtattggtgcatcaattaccaactgtacatt 1762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6893 tcgatatggaaatacttagcaatttacgtgtattggtgcatcaattaccaactgtacatt 6834
Query: 1763 ttgaagtaatgcaagaattaacaaatctcttaggtaaacttatgagtagatccgatcaaa 1822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6833 ttgaagtaatgcaagaattaacaaatctcttaggtaaacttatgagtagatccgatcaaa 6774
Query: 1823 ataaaatgacaatttcaaatattgccatttgtttagtaccaaccctaaattgtgtacctg 1882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6773 ataaaatgacaatttcaaatattgccatttgtttagtaccaaccctaaattgtgtacctg 6714
Query: 1883 caatcgttacctattcaattcaaatgcacgatttcttttataatgaagtttttccacaac 1942
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6713 caatcgttacctattcaattcaaatgcacgatttcttttataatgaagtttttccacaac 6654
Query: 1943 atcatctttactatatgagaccatatgaagagaaattagtagagtctgctccaactcaac 2002
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6653 atcatctttactatatgagaccatatgaagagaaattagtagagtctgctccaactcaac 6594
Query: 2003 caatcaatattatgacaacaagtggtggtgagaaaagatattcaagtagacctgcttcta 2062
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6593 caatcaatattatgacaacaagtggtggtgagaaaagatattcaagtagacctgcttcta 6534
Query: 2063 ttactatctctggtttattaccctcaaatggtcaaaataatagtccttcctcttcaacta 2122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6533 ttactatctctggtttattaccctcaaatggtcaaaataatagtccttcctcttcaacta 6474
Query: 2123 tcacttcaactacaatcacatctccacatgattctactgctccaattacttttactgtta 2182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6473 tcacttcaactacaatcacatctccacatgattctactgctccaattacttttactgtta 6414
Query: 2183 ctactactttttcacctg 2200
||||||||||||||||||
Sbjct: 6413 ctactactttttcacctg 6396
Score = 305 bits (154), Expect(6) = e-160
Identities = 154/154 (100%)
Strand = Plus / Minus
Query: 2303 ttagtgatacaaactctacaaaatctgatcgtagaacctttagagttgatccaaatttgg 2362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6293 ttagtgatacaaactctacaaaatctgatcgtagaacctttagagttgatccaaatttgg 6234
Query: 2363 atttaactcaatacatagaagatactcaatataatgtcaatagaaattatctttataatg 2422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6233 atttaactcaatacatagaagatactcaatataatgtcaatagaaattatctttataatg 6174
Query: 2423 gtggaccaagtggtactactggtacaactccaaa 2456
||||||||||||||||||||||||||||||||||
Sbjct: 6173 gtggaccaagtggtactactggtacaactccaaa 6140
Score = 145 bits (73), Expect(6) = e-160
Identities = 73/73 (100%)
Strand = Plus / Minus
Query: 2599 aataatacaactgatcaatctaaaatctatagaagaagtgttgcatatacaaacaatgaa 2658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5997 aataatacaactgatcaatctaaaatctatagaagaagtgttgcatatacaaacaatgaa 5938
Query: 2659 gatacaaaagctg 2671
|||||||||||||
Sbjct: 5937 gatacaaaagctg 5925
Score = 145 bits (73), Expect(6) = e-160
Identities = 73/73 (100%)
Strand = Plus / Minus
Query: 1 atatagtggagataattcaccaactctatcacgtaatcatcatgacgaaatagggcacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7516 atatagtggagataattcaccaactctatcacgtaatcatcatgacgaaatagggcacct 7457
Query: 61 tcaatatacagcc 73
|||||||||||||
Sbjct: 7456 tcaatatacagcc 7444
Score = 69.9 bits (35), Expect(6) = e-160
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 2545 tctcttagcgttggtagtaatacaagtgttggcgt 2579
|||||||||||||||||||||||||||||||||||
Sbjct: 6051 tctcttagcgttggtagtaatacaagtgttggcgt 6017
Score = 28.2 bits (14), Expect(6) = e-160
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 1519 acaatcaatcaata 1532
||||||||||||||
Sbjct: 6955 acaatcaatcaata 6942
Score = 28.2 bits (14), Expect(6) = e-160
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 562 acaatcaatcaata 575
||||||||||||||
Sbjct: 7077 acaatcaatcaata 7064
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 108600042
Number of Hits to DB: 2,794,049,636
Number of extensions: 160417826
Number of successful extensions: 12463432
Number of sequences better than 10.0: 63
Length of query: 2671
Length of database: 106,710,029,556
Length adjustment: 25
Effective length of query: 2646
Effective length of database: 103,995,028,506
Effective search space: 275170845426876
Effective search space used: 275170845426876
X1: 11 (21.8 bits)
S2: 23 (46.1 bits)
Dictyostelium discoideum cDNA Project Home