Dictyostelium discoideum cDNA Contig-U10723-1

Assembled

Chromosomal Location of Contig-U10723-1

Sequence Contig-U10723-1

AAAAAACAAT TTTTTTTTTA TTTATTTTAT TTTTTGTAAT TTTAAATTCT
ATTAATATTA TTGTTTATTT TTGTTTATGT GTATTTTTTA TTTGTTTATA
TATACAACCT AAATTGAAAA AACAAAAACA AAAACAAAAA CAAAAACAAA
AACAAAAACA AAAACAAAAA CAAAAACAAA AACAAAAACA AAACAAAAAC
AAAAACAAAA ACAAAAACAA AAACATAGAA AAAAAAA--- -------TAA
TGATAATGAT AATAATAACA ATGATAATAA TAATAACCTT AATAATAGTA
ACCTTAATAA TAATAATGGT AGTAATATTA ATATTAGTAG TAGTAATAAC
ATTTTAGGTG GTATGCCAAA ATTACGTGAA GAAATTAAGA ATGTATTTTT
AAATTTTAAA CCATTTGGTA CAAAAGTTTC AAGTAGTCAA AAATTATTTG
AAAAACATAT TAAAACATTA CAAACTCCAT TCATTTCAAA GAAGGAACTT
TTTTCAATTG GTGAAATGTG TAAATTAGAT AAGATTGAAA CTAAAAATAC
TTGTGAATTA CTCACTGAAT TAGGCTTATT ATTTTGGTCC GAAGATCATG
ATTGGGTAAT TTTAGATCCA ATTTGGTTAT CAAATACTTT AAATTTATTG
TTAACCTTAA AACAATCATC ATCAGCCCCA AGTACACCAC CTCAAATACC
TTTAAATTCT ACAAATTTAA ACAATACATC AATACCATCA CAAATTACTA
CCACATCCAC AAATTCATCA TCAACATCAA CATCAACATC AACATCAACA
TCAACATCAA CATCAACATC AACATCAACA TCAACATCAA CACCATTACA
AACACCTACA TCACTTGTAT CATTATCAAA TATTTCATTA TCAACCATTT
CAATTCCAAT TCAACCAAAT ACATCATCAA TTCTATTAGA TAGTAGTATG
AACGATAGTT TTAATAAGGA AAGTAGTGGA AGTAATAAAG TAGCTAACCC
AACCATTAGA AAAAGGGATA TTATATTAAT GAGTAATTTA GAAGGTATTT
GGAATGATAT TCCAACAAGA TTATATCCAT ATTTATTAAC ATTGGCCAAG
AAATTTAATA TAGCTTATCA AATTGATACA CTCTATGATC CAACTTCTTG
GGGCTTTGTT TATCCATCAC CAATTTCTAA TCAACAACAA CAACAACAAC
AACAATCATC AACTCAACAC CAACACCAAC ACCACCACCA CCAACAACAA
CAACAAACTA GTATAAATTT AAATAGATTA TCAATTAGTG GTAGTCCATC
ATTAAGATCA ATTTCAATTC GTAATGGTGG TAATATTAAT ACATTAAATT
CAAGTGGATC AAATAATTCA AGTCCATTAA AATTCCCAAA TTTAGCATTA
TCACCAATTC GTAATGGTAG TAATTCAAAT TTAACTCATC ATCATGGTAG
TAATTCAAGT TTAAATAATT TATTATCACC ATTAAAGAAT TTACAATTAC
AACAAAAGTA TGATAAATTG AAACTATTAA ATGAAAAAGT GATTTTCTTA
CCAAATGAAT TACCGAATGA ACCACCAATG TCAATGGATA AGATGTTTTT
AGATGTTGGT GAACCAAGAT CTCTTTGTAG AATATTCCAA TTTGAAAAAA
AGATACCATC AAGTTTCTTC CCAAGATTAT TGAGTCAATT GTATATGTTT
TGTTCAATTA AACATTGTTG GAAGAATGGA GTTATCTTGG AG

Translated Amino Acid Sequence Contig-U10723-1

KTIFFLFILFFVILNSINIIVYFCLCVFFICLYIQPKLKKQKQKQKQKQKQKQKQKQKQK
QKQNKNKNKNKNKNIEKK---

---NDNDNNNNDNNNNLNNSNLNNNNGSNINISSSNNILGGMPKLREEIKNVFLNFKPFG
TKVSSSQKLFEKHIKTLQTPFISKKELFSIGEMCKLDKIETKNTCELLTELGLLFWSEDH
DWVILDPIWLSNTLNLLLTLKQSSSAPSTPPQIPLNSTNLNNTSIPSQITTTSTNSSSTS
TSTSTSTSTSTSTSTSTSTSTPLQTPTSLVSLSNISLSTISIPIQPNTSSILLDSSMNDS
FNKESSGSNKVANPTIRKRDIILMSNLEGIWNDIPTRLYPYLLTLAKKFNIAYQIDTLYD
PTSWGFVYPSPISNQQQQQQQQSSTQHQHQHHHHQQQQQTSINLNRLSISGSPSLRSISI
RNGGNINTLNSSGSNNSSPLKFPNLALSPIRNGSNSNLTHHHGSNSSLNNLLSPLKNLQL
QQKYDKLKLLNEKVIFLPNELPNEPPMSMDKMFLDVGEPRSLCRIFQFEKKIPSSFFPRL
LSQLYMFCSIKHCWKNGVILE

Homology Contig-U10723-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U10723-1 (Contig-U10723-1Q) /CSM_Contig/Conti...   922  0.0
Contig-U02012-1 (Contig-U02012-1Q) /CSM_Contig/Conti...    44  5e-04
Contig-U12089-1 (Contig-U12089-1Q) /CSM_Contig/Conti...    40  0.008
Contig-U10772-1 (Contig-U10772-1Q) /CSM_Contig/Conti...    40  0.008
Contig-U05518-1 (Contig-U05518-1Q) /CSM_Contig/Conti...    40  0.008
Contig-U13486-1 (Contig-U13486-1Q) /CSM_Contig/Conti...    38  0.031
Contig-U11515-1 (Contig-U11515-1Q) /CSM_Contig/Conti...    38  0.031
Contig-U11466-1 (Contig-U11466-1Q) /CSM_Contig/Conti...    38  0.031
Contig-U14374-1 (Contig-U14374-1Q) /CSM_Contig/Conti...    30  7.6

Homology Contig-U10723-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AY232271) Dictyostelium discoideum putative protein Roco9 (...   765   0.0    4
(BJ388243) Dictyostelium discoideum cDNA clone:dds8i17, 5' e...   599   0.0    2
(BJ420622) Dictyostelium discoideum cDNA clone:ddv39k24, 5' ...   765   0.0    3
(BJ334225) Dictyostelium discoideum cDNA clone:dda45g15, 5' ...   599   0.0    2
(BJ418952) Dictyostelium discoideum cDNA clone:ddv34g16, 5' ...   599   0.0    2
(BJ420680) Dictyostelium discoideum cDNA clone:ddv40h03, 5' ...   745   0.0    2
(BJ333602) Dictyostelium discoideum cDNA clone:dda43g08, 5' ...   636   0.0    2
(GR566418) CBTF2307.b1 CBTF Dictyostelium purpureum 12 hr ve...    82   1e-48  6
(GR584602) CCAA2547.b1 CCAA Dictyostelium purpureum 0 hr sta...    82   1e-45  5
(GR567220) CBTF2924.b1 CBTF Dictyostelium purpureum 12 hr ve...    70   3e-07  1

Homology Contig-U10723-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q6XHA7) RecName: Full=Probable serine/threonine-protein kinase ...   520   e-146
(Q1ZXD6) RecName: Full=Probable serine/threonine-protein kinase ...    41   0.16
CP000981_6(CP000981|pid:none) Borrelia duttonii Ly plasmid pl23b...    37   2.3
AE001362_197(AE001362|pid:none) Plasmodium falciparum 3D7 chromo...    37   2.3
E71602(E71602)probable integral membrane protein PFB0950w - mala...    37   2.3
AY512913_1(AY512913|pid:none) Mus musculus clone NIA:K0221A09 un...    37   3.0
EU401918_8(EU401918|pid:none) Bombus hypocrita sapporoensis mito...    37   3.0
AB289986_1(AB289986|pid:none) Glypta fumiferanae ichnovirus DNA,...    35   6.6