Homology Contig-U10709-1 vs Protein

Query= Contig-U10709-1 (Contig-U10709-1Q) /CSM_Contig/Contig-U10709-1Q.Seq.d
         (1238 letters)

Database: nrp_A
           3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ924536_1(DQ924536|pid:none) Mus musculus ubiquitin ligase (Ubr...    40   0.13
(Q5U430) RecName: Full=E3 ubiquitin-protein ligase UBR3;        ...    40   0.13
(Q6ZT12) RecName: Full=E3 ubiquitin-protein ligase UBR3;        ...    40   0.13
AY094815_1(AY094815|pid:none) Drosophila melanogaster LD31957 fu...    38   0.85
(O70481) RecName: Full=E3 ubiquitin-protein ligase UBR1;        ...    35   5.5
AL844548_1(AL844548|pid:none) Mouse DNA sequence from clone RP23...    35   5.5
AK166885_1(AK166885|pid:none) Mus musculus blastocyst blastocyst...    35   5.5
BC090969_1(BC090969|pid:none) Mus musculus ubiquitin protein lig...    35   5.5
CP000682_2155(CP000682|pid:none) Metallosphaera sedula DSM 5348,...    34   9.4

>DQ924536_1(DQ924536|pid:none) Mus musculus ubiquitin ligase (Ubr3)
            mRNA, complete cds.
          Length = 1889

 Score = 40.4 bits (93), Expect = 0.13
 Identities = 15/50 (30%), Positives = 32/50 (64%)
 Frame = +3

Query: 1086 DLQKRKGLAEDFLQNVIMFSTNKLMCGMTEDQVIRKELIHRLCLGDNTHS 1235
            D++  + + E  L  +++  + +L  GM++D ++R E++ +LC+ D THS
Sbjct: 754  DVEHERSMLEGALTFLVILLSLRLHLGMSDDDILRAEMVAQLCMNDRTHS 803

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 1,565,642,522
Number of extensions: 27219478
Number of successful extensions: 54436
Number of sequences better than 10.0: 9
Number of HSP's gapped: 54283
Number of HSP's successfully gapped: 10
Length of query: 412
Length of database: 1,040,966,779
Length adjustment: 131
Effective length of query: 281
Effective length of database: 621,205,444
Effective search space: 174558729764
Effective search space used: 174558729764
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)