Homology Contig-U10700-1 vs Protein

Query= Contig-U10700-1 (Contig-U10700-1Q) /CSM_Contig/Contig-U10700-1Q.Seq.d
         (1114 letters)

Database: nrp_A
           3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q9Y0T2) RecName: Full=F-box/WD repeat-containing protein A;    ...   480   e-134
AF151112_1(AF151112|pid:none) Dictyostelium discoideum cheater C...   480   e-134
CP000726_2380(CP000726|pid:none) Clostridium botulinum A str. AT...    36   2.8
FJ899578_13(FJ899578|pid:none) Larix occidentalis chloroplast, p...    35   6.2

>(Q9Y0T2) RecName: Full=F-box/WD repeat-containing protein A;
            Short=F-box protein A; AltName: Full=Protein cheater A;
            &AC117076_62(AC117076|pid:none)
            &AF151111_1(AF151111|pid:none)
          Length = 1247

 Score =  480 bits (1235), Expect = e-134
 Identities = 232/232 (100%), Positives = 232/232 (100%)
 Frame = +1

Query: 400  MEKAEKEVNEMFGTTNPDYGWKIYLKKLDMEILIKKTTSGYYMIGKGSFSSRYSPELLAD 579
            MEKAEKEVNEMFGTTNPDYGWKIYLKKLDMEILIKKTTSGYYMIGKGSFSSRYSPELLAD
Sbjct: 240  MEKAEKEVNEMFGTTNPDYGWKIYLKKLDMEILIKKTTSGYYMIGKGSFSSRYSPELLAD 299

Query: 580  VLYQKNPFEWDTFYDKTKLVESINSSIREVEVHYRMWRNTITMRLLQSVKKGPGNFSSVH 759
            VLYQKNPFEWDTFYDKTKLVESINSSIREVEVHYRMWRNTITMRLLQSVKKGPGNFSSVH
Sbjct: 300  VLYQKNPFEWDTFYDKTKLVESINSSIREVEVHYRMWRNTITMRLLQSVKKGPGNFSSVH 359

Query: 760  WRSICSPNYQVADGIEVHYLPTALLNYGLGDGSFTSFLAAIEVKGYPTPWEEEMVTKMFA 939
            WRSICSPNYQVADGIEVHYLPTALLNYGLGDGSFTSFLAAIEVKGYPTPWEEEMVTKMFA
Sbjct: 360  WRSICSPNYQVADGIEVHYLPTALLNYGLGDGSFTSFLAAIEVKGYPTPWEEEMVTKMFA 419

Query: 940  ARIISNQNSIINHVNKLTGGSEMIRELPVIPSVQHHCGDVGSHIGTPQVYNA 1095
            ARIISNQNSIINHVNKLTGGSEMIRELPVIPSVQHHCGDVGSHIGTPQVYNA
Sbjct: 420  ARIISNQNSIINHVNKLTGGSEMIRELPVIPSVQHHCGDVGSHIGTPQVYNA 471

 Score =  123 bits (308), Expect(3) = 4e-57
 Identities = 55/55 (100%), Positives = 55/55 (100%)
 Frame = +3

Query: 222 SKWDFHCREAHIIEEYDHLNHIIHLNFTNPLISNLDMNLYRSCKYDPQERLFVIA 386
           SKWDFHCREAHIIEEYDHLNHIIHLNFTNPLISNLDMNLYRSCKYDPQERLFVIA
Sbjct: 78  SKWDFHCREAHIIEEYDHLNHIIHLNFTNPLISNLDMNLYRSCKYDPQERLFVIA 132

 Score =  112 bits (280), Expect(3) = 4e-57
 Identities = 54/56 (96%), Positives = 55/56 (98%)
 Frame = +1

Query: 13  LXSQSIHEVLELAFSTKIPWTKLEYESSEKHIIHSYSSHERGIYLSKGVAEFNISP 180
           + SQSIHEVLELAFSTKIPWTKLEYESSEKHIIHSYSSHERGIYLSKGVAEFNISP
Sbjct: 9   ISSQSIHEVLELAFSTKIPWTKLEYESSEKHIIHSYSSHERGIYLSKGVAEFNISP 64

 Score = 31.6 bits (70), Expect(3) = 4e-57
 Identities = 15/18 (83%), Positives = 15/18 (83%)
 Frame = +2

Query: 182 ENMYELLLDISSRIKMGF 235
           ENMYELLLDISSR K  F
Sbjct: 65  ENMYELLLDISSRSKWDF 82

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 1,808,643,344
Number of extensions: 36969834
Number of successful extensions: 83351
Number of sequences better than 10.0: 4
Number of HSP's gapped: 83335
Number of HSP's successfully gapped: 10
Length of query: 371
Length of database: 1,040,966,779
Length adjustment: 130
Effective length of query: 241
Effective length of database: 624,409,729
Effective search space: 150482744689
Effective search space used: 150482744689
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)