Dictyostelium discoideum cDNA Contig-U10700-1

Assembled

Chromosomal Location of Contig-U10700-1

Sequence Contig-U10700-1

ACTGTTGGCC TACTGGNAAG TCAAAGTATT CATGAAGTTT TAGAACTTGC
ATTTTCAACA AAAATCCCAT GGACAAAATT AGAATATGAA TCAAGTGAAA
AACATATAAT ACATTCCTAT TCATCACATG AAAGAGGTAT TTATTTAAGT
AAAGGTGTTG CAGAATTTAA TATTTCACCA GGAAAATATG TATGAACTTT
TATTGGATAT TTCTTCAAGG ATCAAAATGG GATTTTCATT GTAGAGAAGC
ACATATTATT GAAGAATATG ATCATTTAAA TCATATTATT CATTTAAATT
TTACAAATCC ATTAATTAGT AATTTGGATA TGAATTTATA TAGAAGTTGT
AAGTATGATC CACAAGAGAG ATTATTTGTA ATTGCTA--- -------TTA
TGGAAAAAGC AGAAAAGGAG GTAAATGAAA TGTTTGGTAC AACCAATCCA
GACTATGGTT GGAAAATTTA TTTAAAGAAA TTGGATATGG AAATTCTAAT
TAAAAAGACA ACCTCTGGTT ACTATATGAT TGGTAAGGGT AGTTTTTCTT
CGAGGTATTC ACCAGAGTTA TTGGCTGATG TACTCTATCA GAAGAATCCT
TTCGAATGGG ATACTTTTTA TGATAAAACT AAATTGGTTG AAAGTATCAA
TAGTTCAATC AGAGAGGTCG AGGTTCATTA TAGAATGTGG AGAAATACAA
TCACCATGAG ATTGCTACAA TCCGTTAAAA AAGGACCTGG TAATTTCTCA
TCGGTACATT GGAGAAGTAT TTGTTCTCCA AATTATCAAG TGGCTGATGG
TATCGAAGTA CATTATCTTC CTACTGCACT CTTAAACTAT GGTTTAGGTG
ATGGTAGTTT CACAAGTTTC TTGGCGGCAA TCGAGGTTAA AGGTTATCCA
ACTCCTTGGG AGGAAGAGAT GGTAACTAAA ATGTTTGCTG CTAGAATCAT
TTCAAATCAA AATAGTATCA TAAATCATGT AAATAAATTA ACAGGTGGTT
CAGAGATGAT AAGAGAATTA CCTGTTATTC CTTCAGTTCA ACATCATTGT
GGTGATGTTG GTTCTCATAT TGGTACTCCT CAAGTCTATA ATGCAAGGTC
GAAAATTTTG CTGA

Translated Amino Acid Sequence Contig-U10700-1

cwptgkskys*sfrtcifnknpmdkiri*ik*ktyntflfit*krylfk*rccri*YFTR
KICMNFYWIFLQGSKWDFHCREAHIIEEYDHLNHIIHLNFTNPLISNLDMNLYRSCKYDP
QERLFVIA---

---MEKAEKEVNEMFGTTNPDYGWKIYLKKLDMEILIKKTTSGYYMIGKGSFSSRYSPEL
LADVLYQKNPFEWDTFYDKTKLVESINSSIREVEVHYRMWRNTITMRLLQSVKKGPGNFS
SVHWRSICSPNYQVADGIEVHYLPTALLNYGLGDGSFTSFLAAIEVKGYPTPWEEEMVTK
MFAARIISNQNSIINHVNKLTGGSEMIRELPVIPSVQHHCGDVGSHIGTPQVYNARSKIL
L

Homology Contig-U10700-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U10700-1 (Contig-U10700-1Q) /CSM_Contig/Conti...  2143  0.0
Contig-U12742-1 (Contig-U12742-1Q) /CSM_Contig/Conti...    40  0.005
Contig-U10432-1 (Contig-U10432-1Q) /CSM_Contig/Conti...    38  0.020
Contig-U14761-1 (Contig-U14761-1Q) /CSM_Contig/Conti...    36  0.079
Contig-U11929-1 (Contig-U11929-1Q) /CSM_Contig/Conti...    36  0.079
Contig-U10422-1 (Contig-U10422-1Q) /CSM_Contig/Conti...    36  0.079
Contig-U08967-1 (Contig-U08967-1Q) /CSM_Contig/Conti...    36  0.079
Contig-U06608-1 (Contig-U06608-1Q) /CSM_Contig/Conti...    36  0.079
Contig-U05223-1 (Contig-U05223-1Q) /CSM_Contig/Conti...    36  0.079
Contig-U01647-1 (Contig-U01647-1Q) /CSM_Contig/Conti...    36  0.079

Homology Contig-U10700-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AF151733) Dictyostelium discoideum F-Box A protein (fbxA) g...  1386   0.0    2
(AF151112) Dictyostelium discoideum cheater ChtA (cht) mRNA,...  1386   0.0    2
(AF151111) Dictyostelium discoideum cheater ChtA (chtA) gene...  1386   0.0    2
(BJ365622) Dictyostelium discoideum cDNA clone:ddc36b06, 5' ...  1185   0.0    1
(BJ343053) Dictyostelium discoideum cDNA clone:dda1h24, 3' e...   999   0.0    1
(BJ325657) Dictyostelium discoideum cDNA clone:dda1h24, 5' e...   761   0.0    1
(GR567049) CBTF2799.g1 CBTF Dictyostelium purpureum 12 hr ve...   143   2e-33  2
(GR568707) CBTF4063.b1 CBTF Dictyostelium purpureum 12 hr ve...    82   3e-33  3
(AC114063) Rattus norvegicus clone CH230-198N1, WORKING DRAF...    38   0.070  5
(AE013218) Buchnera aphidicola str. Sg (Schizaphis graminum)...    40   0.10   14

Homology Contig-U10700-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q9Y0T2) RecName: Full=F-box/WD repeat-containing protein A;    ...   480   e-134
AF151112_1(AF151112|pid:none) Dictyostelium discoideum cheater C...   480   e-134
CP000726_2380(CP000726|pid:none) Clostridium botulinum A str. AT...    36   2.8
FJ899578_13(FJ899578|pid:none) Larix occidentalis chloroplast, p...    35   6.2