Dictyostelium discoideum cDNA Contig-U10692-1

Assembled

Chromosomal Location of Contig-U10692-1

Sequence Contig-U10692-1

CACTGTTGGC CTACTGGATT ATAATTATTA AAAAAAAAAT AGTAAAGCAA
ATAAAAATGA GATATTTTGT AATTGTTCAA TTATTTATTC TATTTTTTTC
ATTTTGTTTA ATAAAAAGTG AATTTATTGA AAGTTCAAGT ATTGATGTAA
CAATTTATGA TCAAGATCCA TATTATAATA ATAATTTTGA AACTGAAGGA
TATGGTGAAT TAACCGAAGG GAATTGTACA AAAATTTATT GATAAAAAAT
TGAGAATTCC AGTTTTATCA AATCTAGATC CATCATCACC AATTAATTTA
AGAGGTAAAG TTATAAATCC TGATTTATTT CAATATTTCT TTAGAAAATC
TCCAAATAAT AGTGGTGGTG GTGAAAAATC AGGTAAAAAC TTTGAAATTA
AATTAAAATT AAAATTATTA AAAAACCAAG AAACTGGATT AATTGAATTT
GAAAGTGATA AATTCTTTCC AATTGATACA AATAATAATT TAACATTATC
AATTCCAACA AATTCAATAA AATCTTATAA AGATTCAGAT GGTAAAATAC
ATAATTATCA TTTTTGTTTA AAATTTAATA ATAAATTATA TTTTAATGGT
ACAAATTTAA ATGAAGAGTT TATTAGATTC ACTGGTGATG ATGATGTTTA
TGTTTTCATT AATGATAAAT TAGTTATTGA TTTAGGTGGT TTACATCAAA
AGGAATCCTC TGATACAGTA TACTTATCAA GATTAGGTTT AGCTAAAAAT
AATTATTATA ATTTTGATTT CTTTTATTGT GAAAGACATA CAACATCTTC
AAATTTTAAA TTAGAAACTA GTTTTGATTT TGGTTGTCCA ATTAATGATT
GTAGTTGTAA TAGAGATAGT GATGAATGTA AATATTATTG TGATCAAAAA
ACTTGTGATG ATGGTAATGA ATGTACATTT GATTTTTGTC CACCTATTGA
TACATTTTTT GAAGATTCTG AATTTTCATC ATTTAATATG AAATCTTATT
GCATTCATAT TGAAAAAGAG ATAAATTTAA AGCCAATTGA TAAATGTTTA
AATGATTTAA AGTGTAATCC AATAACTGGT AAATTTGAAG CAATAGGTGA
ACCAATGAAA TGTAATGGTA AATGTCATAC TGGTGTTTGT TCAAATAGTA
CTTGCATTGA AAAAGATTCA AAATTCTGTT CCAAAGAACT AAATGATAAT
GATCCAAACA AACAAAGAGT CCACCACCAT GTGATGGTAT AATATGTAAA
ACAAAATATG TTTTTAAAAA GGTTTGGAAT ACTTTATTTA ATTAAAAAAA
TAAAAATAAA AATAAAAAAA AA-------- --TATTATTG TGATCAAAAA
ACTTGTGATG ATGGTAATGA ATGTACATTT GATTTTTGTC CACCTATTGA
TACATTTTTT GAAGATTCTG AATTTTCATC ATTTAATATG GGATCTTATT
GCATTCATAT TGAAAAAGAG ATAAATTTAA AGCCAATTGA TAAATGTTTA
AATGATTTAA AGTGTAATCC AATAACTGGT AAATTTGAAG CAATAGGTGA
ACCAATGAAA TGTAATGGTA AATGTCATAC TGGTGTTTGT TCAAATAGTA
CTTGCATTGA AAAAGATTCA AAATTCTGTT CCAAAGAACT AGATGATAAT
GATCCAAATA AATCTTTCTT TTGTGATCCA AATATTGGTT GTAGGGCATC
AATTATTAAA ACATCTAAAC CAACTCCAAC TCCAACACCA ACATTAACAC
CAACACCCAC ACCAACACCC AAACCAACAT CAACACCCAA ACCAACATCA
AAACCAACAT CCACACCTAC ACCAACACCC AAACAAACAA AGAGTCCACC
ACCATGTGAT GGTATAATAT GTAAAACAAA ATATGTTTTT AAAAAGGTTT
GGAATACTTT ATTTAATTAA AAAAATAAAA ATAAAAATAA AAATAAAAAT
AAAAATAAAA TAAA

Translated Amino Acid Sequence Contig-U10692-1

hcwptgl*llkkk**sk*k*dil*lfnylfyffhfv**kvnllkvqvlm*qfmikihiii
iilklkdmvn*pkgivqkfidkklripvlsnldpsspinlrgkvinpdlfqyffrkspnn
sgggeksgknfeiklklkllknqetgliefesdkffpidtnnnltlsiptnsiksykdsd
gkihnyhfclkfnnklyfngtnlneefirftgdddvyvfindklvidlgglhqkessdtv
ylsrlglaknnyynfdffycerhttssnfkletsfdfgcpindcscnrdsdeckyycdqk
tcddgnectfdfcppidtffedsefssfnmksycihiekeinlkpidkclndlkcnpitg
kfeaigepmkcngkchtgvcsnstciekdskfcskelndndpnkqrvhhhvmv*YVKQNM
FLKRFGILYLIKKIKIKIKK---

---YYCDQKTCDDGNECTFDFCPPIDTFFEDSEFSSFNMGSYCIHIEKEINLKPIDKCLN
DLKCNPITGKFEAIGEPMKCNGKCHTGVCSNSTCIEKDSKFCSKELDDNDPNKSFFCDPN
IGCRASIIKTSKPTPTPTPTLTPTPTPTPKPTSTPKPTSKPTSTPTPTPKQTKSPPPCDG
IICKTKYVFKKVWNTLFN*knknknknknknki

Homology Contig-U10692-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U10692-1 (Contig-U10692-1Q) /CSM_Contig/Conti...  1721  0.0
Contig-U11582-1 (Contig-U11582-1Q) /CSM_Contig/Conti...    78  4e-14
Contig-U13974-1 (Contig-U13974-1Q) /CSM_Contig/Conti...    62  2e-09
Contig-U00689-1 (Contig-U00689-1Q) /CSM_Contig/Conti...    54  6e-07
Contig-U12894-1 (Contig-U12894-1Q) /CSM_Contig/Conti...    52  2e-06
Contig-U14636-1 (Contig-U14636-1Q) /CSM_Contig/Conti...    48  4e-05
Contig-U10844-1 (Contig-U10844-1Q) /CSM_Contig/Conti...    46  1e-04
Contig-U10672-1 (Contig-U10672-1Q) /CSM_Contig/Conti...    46  1e-04
Contig-U04367-1 (Contig-U04367-1Q) /CSM_Contig/Conti...    44  6e-04
Contig-U01084-1 (Contig-U01084-1Q) /CSM_Contig/Conti...    44  6e-04

Homology Contig-U10692-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ356107) Dictyostelium discoideum cDNA clone:dda59c12, 3' ...  1257   0.0    1
(BJ324048) Dictyostelium discoideum cDNA clone:dda4b15, 5' e...   305   0.0    5
(BJ330094) Dictyostelium discoideum cDNA clone:dda27j08, 5' ...   305   0.0    5
(BJ328968) Dictyostelium discoideum cDNA clone:dda30e08, 5' ...   293   0.0    5
(C92448) Dictyostelium discoideum slug cDNA, clone SSE559.        739   0.0    2
(BJ328495) Dictyostelium discoideum cDNA clone:dda28l07, 5' ...   289   0.0    4
(BJ325311) Dictyostelium discoideum cDNA clone:dda13d24, 5' ...   278   0.0    5
(BJ325265) Dictyostelium discoideum cDNA clone:dda13f18, 5' ...   278   0.0    5
(BJ386708) Dictyostelium discoideum cDNA clone:dds10a07, 5' ...   283   0.0    4
(BJ328737) Dictyostelium discoideum cDNA clone:dda29c07, 5' ...   278   0.0    4

Homology Contig-U10692-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q94494) RecName: Full=Protein psiH; Flags: Precursor;  &U67940_...   199   8e-54
(Q55FQ4) RecName: Full=Protein psiB; Flags: Precursor;                179   5e-47
(Q54VS2) RecName: Full=Protein psiP; Flags: Precursor;                182   4e-46
(Q968Z6) RecName: Full=Protein psiA; AltName: Full=Prespore-cell...   168   2e-45
(Q86HT1) RecName: Full=Protein psiL; Flags: Precursor;  &AC11695...   160   6e-39
(Q557E9) RecName: Full=Protein psiG; Flags: Precursor;  &AC11568...   155   4e-36
(Q54P69) RecName: Full=Protein psiM; Flags: Precursor;                135   2e-32
(Q54G85) RecName: Full=Protein psiJ; Flags: Precursor;                142   2e-32
(Q54CH8) RecName: Full=Protein psiN; Flags: Precursor;                125   4e-27
(Q1ZXC5) RecName: Full=Protein psiC; Flags: Precursor;                125   6e-27