Homology Contig-U10631-1 vs DNA
Query= Contig-U10631-1 (Contig-U10631-1Q) /CSM_Contig/Contig-U10631-1Q.Seq.d
(700 letters)
Database: ddbj_A
108,600,042 sequences; 106,710,029,556 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(AU269033) Dictyostelium discoideum vegetative cDNA clone:VS... 1015 0.0 2
(AU261814) Dictyostelium discoideum vegetative cDNA clone:VS... 954 0.0 2
(BJ433421) Dictyostelium discoideum cDNA clone:ddv21f19, 3' ... 642 e-180 1
(BJ411158) Dictyostelium discoideum cDNA clone:ddv3a08, 5' e... 44 3e-04 3
(BJ429359) Dictyostelium discoideum cDNA clone:ddv3a08, 3' e... 44 5e-04 3
(AC129751) Rattus norvegicus clone CH230-22G16, WORKING DRAF... 38 0.005 2
(AC094840) Rattus norvegicus clone CH230-6B2, WORKING DRAFT ... 38 0.005 2
(AC134654) Rattus norvegicus clone CH230-49M11, *** SEQUENCI... 38 0.005 2
(DW577452) EST_ssal_rgb2_41871 rgb2 Salmo salar cDNA clone s... 50 0.12 1
(AZ681177) ENTMR45TR Entamoeba histolytica Sheared DNA Entam... 38 0.35 2
(ER307099) 1092343762781 Global-Ocean-Sampling_GS-34-01-01-1... 40 0.35 2
(CP000123) Mycoplasma capricolum subsp. capricolum ATCC 2734... 36 0.36 14
(FP091242) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 0.48 1
(CU986304) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 0.48 1
(BH160514) ENTRY13TR Entamoeba histolytica Sheared DNA Entam... 48 0.48 1
(BH156318) ENTRT39TR Entamoeba histolytica Sheared DNA Entam... 48 0.48 1
(AZ692699) ENTHR60TR Entamoeba histolytica Sheared DNA Entam... 48 0.48 1
(AZ676839) ENTKZ29TF Entamoeba histolytica Sheared DNA Entam... 48 0.48 1
(AZ670150) ENTLT96TR Entamoeba histolytica Sheared DNA Entam... 48 0.48 1
(AZ541126) ENTEX88TR Entamoeba histolytica Sheared DNA Entam... 48 0.48 1
(CT395070) Sus scrofa genomic clone CH242-464A5, genomic sur... 48 0.48 1
(EG551059) MM04K13_RP Sugar Beet germination cDNA library Be... 48 0.48 1
(AP010130) Lotus japonicus genomic DNA, chromosome 3, clone:... 38 0.55 5
(AE014296) Drosophila melanogaster chromosome 3L, complete s... 32 0.72 2
(AC223094) Bos taurus clone CH240-429K5, WORKING DRAFT SEQUE... 42 0.80 3
(AC009375) Drosophila melanogaster 3L BAC RP98-44L18 (Roswel... 32 1.00 2
(FP102846) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 34 1.00 2
(GH293740) SL_L1_38E04 Silene latifolia male and female flow... 36 1.00 2
(AC014850) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 32 1.1 2
(FH630126) CHO_OF4556xk15f1.ab1 CHO_OF4 Nicotiana tabacum ge... 38 1.2 2
(AC013744) Homo sapiens clone RP11-114M13, WORKING DRAFT SEQ... 32 1.2 7
(CQ585017) Sequence 12775 from Patent WO0171042. 32 1.2 2
(BT011496) Drosophila melanogaster GH26928 full insert cDNA. 32 1.2 2
(AC182691) Populus trichocarpa clone Pop1-42E13, complete se... 44 1.2 3
(CQ604652) Sequence 32410 from Patent WO0171042. 32 1.2 2
(EK286148) 1095462313840 Global-Ocean-Sampling_GS-31-01-01-1... 34 1.3 2
(ES580174) FPS019.C7_P04 LSG10-01 Lymnaea stagnalis cDNA clo... 32 1.3 2
(AW941036) GH26928.3prime GH Drosophila melanogaster head pO... 32 1.3 2
(FI405859) CH322-131D24.y CHORI-322 Drosophila melanogaster ... 32 1.3 2
(EC227176) 425336 CK01 Drosophila melanogaster cDNA clone 16... 32 1.3 2
(AC148202) Carollia perspicillata clone 598J23, complete seq... 46 1.5 3
(AC179557) Strongylocentrotus purpuratus clone R3-8C8, WORKI... 44 1.8 4
(AC177186) Strongylocentrotus purpuratus clone R3-4018G4, WO... 38 1.9 6
(AL929424) Mouse DNA sequence from clone RP23-24F19 on chrom... 46 1.9 1
(AL589737) Mouse DNA sequence from clone RP23-43L14 on chrom... 46 1.9 1
(BX294436) Mouse DNA sequence *** SEQUENCING IN PROGRESS ***... 46 1.9 1
(AC177101) Strongylocentrotus purpuratus clone R3-4012M11, W... 46 1.9 1
(AC172536) Bos taurus clone CH240-281M23, WORKING DRAFT SEQU... 46 1.9 1
(EK072968) 1092961007884 Global-Ocean-Sampling_GS-31-01-01-1... 46 1.9 1
(CZ821796) OC__Ba0200H24.f OC__Ba Oryza coarctata genomic cl... 46 1.9 1
(BZ565204) pacs2-164_5131.y2 pacs2-164 Pseudomonas aeruginos... 46 1.9 1
(BH595269) BOHDA39TF BOHD Brassica oleracea genomic clone BO... 46 1.9 1
(EL926928) NY4Tr1_3_G11.g1_A039 NY4 trophonts (NY4Tr1) Ichth... 46 1.9 1
(CP001357) Brachyspira hyodysenteriae WA1, complete genome. 46 1.9 1
(CP000746) Actinobacillus succinogenes 130Z, complete genome. 46 1.9 1
(CP000487) Campylobacter fetus subsp. fetus 82-40, complete ... 46 1.9 1
(AC233019) Monodelphis domestica clone VMRC18-745A23, WORKIN... 40 2.0 4
(AL445207) Human DNA sequence from clone RP11-412K20 on chro... 36 2.5 7
(AX345328) Sequence 399 from Patent WO0200928. 34 2.6 3
(AC093868) Homo sapiens BAC clone RP11-590C19 from 4, comple... 38 2.8 4
(CR457459) Zebrafish DNA sequence from clone DKEY-25P11 in l... 38 2.8 6
(AC024791) Caenorhabditis elegans cosmid Y47G6A, complete se... 36 3.0 7
(GS306581) LuSp031D11_1061063856811_TV POTATO-B-01-100-110KB... 36 3.1 2
(AP010118) Lotus japonicus genomic DNA, chromosome 5, clone:... 42 3.3 3
(ET680818) CHO_OF344xn11f1.ab1 CHO_OF Nicotiana tabacum geno... 42 3.5 2
(BX005154) Zebrafish DNA sequence from clone CH211-288G17 in... 34 3.5 6
(EJ994333) 1093023075654 Global-Ocean-Sampling_GS-30-02-01-1... 42 3.7 2
(AC187549) Gossypium hirsutum chromosome UNKNOWN clone ZMMBB... 32 3.8 2
(CU694499) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 4.1 4
(AC090096) Homo sapiens chromosome 8, clone RP11-159C14, com... 42 4.3 6
(DX471365) Cpl13424 Papaya Genomic DNA BAC Library Carica pa... 40 4.3 2
(CT955990) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 42 4.4 4
(ET725490) CHO_OF136xj15r1.ab1 CHO_OF Nicotiana tabacum geno... 42 4.4 2
(AC018991) Homo sapiens, clone RP11-448E20, complete sequence. 38 4.4 6
(FN358240) Schistosoma mansoni genome sequence supercontig S... 32 4.7 2
(AP010656) Candidatus Azobacteroides pseudotrichonymphae gen... 36 4.8 10
(EK117761) 1092963264805 Global-Ocean-Sampling_GS-31-01-01-1... 34 4.8 2
(AZ545507) ENTDN27TR Entamoeba histolytica Sheared DNA Entam... 34 4.8 2
(CG941316) MBEEN67TFB mth2 Medicago truncatula genomic clone... 32 4.8 2
(EJ488585) 1095403520008 Global-Ocean-Sampling_GS-28-01-01-1... 34 4.8 2
(EJ175501) 1092344099033 Global-Ocean-Sampling_GS-27-01-01-1... 34 4.8 2
(EK288584) 1095462321015 Global-Ocean-Sampling_GS-31-01-01-1... 34 4.9 2
(CC962829) BOIEQ03TF BO_1.4_1.6_KB_nuc Brassica oleracea gen... 34 5.0 2
(CR847994) Zebrafish DNA sequence from clone CH211-203H15 in... 34 5.0 6
(CP000924) Thermoanaerobacter pseudethanolicus ATCC 33223, c... 40 5.3 13
(AC215630) Populus trichocarpa clone POP049-I09, complete se... 32 6.1 6
(CX110138) EI027G19 A normalized whole-life-cycle cDNA libra... 30 6.6 3
(CR394569) Zebrafish DNA sequence from clone CH211-212K20 in... 36 6.6 6
(FN357550) Schistosoma mansoni genome sequence supercontig S... 40 7.3 9
(CT027807) Zebrafish DNA sequence from clone CH73-165P16 in ... 44 7.4 1
(CR293515) Zebrafish DNA sequence from clone CH211-106H4 in ... 44 7.4 1
(BX950187) Zebrafish DNA sequence from clone CH211-15O14 in ... 44 7.4 1
(BX004870) Zebrafish DNA sequence from clone CH211-168H9 in ... 44 7.4 1
(AL935193) Zebrafish DNA sequence from clone CH211-209H11. 44 7.4 1
(AC165316) Mus musculus chromosome 5, clone RP23-168G13, com... 44 7.4 1
(AC140919) Mus musculus BAC clone RP24-510L10 from 1, comple... 44 7.4 1
(AC125025) Mus musculus chromosome 5, clone RP24-340K5, comp... 44 7.4 1
(AC116556) Mus musculus strain C57BL/6J chromosome 8 clone r... 44 7.4 1
(AC209100) Populus trichocarpa clone POP042-C19, complete se... 44 7.4 1
(AC139516) Rattus norvegicus clone CH230-177J1, WORKING DRAF... 44 7.4 1
(AC128767) Rattus norvegicus clone CH230-446I21, WORKING DRA... 44 7.4 1
(AC123283) Rattus norvegicus clone CH230-180D7, *** SEQUENCI... 44 7.4 1
(AC123264) Rattus norvegicus clone CH230-290F24, *** SEQUENC... 44 7.4 1
(AC105866) Rattus norvegicus clone CH230-102G8, *** SEQUENCI... 44 7.4 1
(AC096456) Rattus norvegicus clone CH230-163P20, *** SEQUENC... 44 7.4 1
(CU928364) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 7.4 1
(CU655941) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 7.4 1
(CU651647) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 7.4 1
(CT990630) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 7.4 1
(CT009675) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 7.4 1
(CR936558) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 44 7.4 1
(AK050875) Mus musculus 9 days embryo whole body cDNA, RIKEN... 44 7.4 1
(AZ865190) 2M0175L10F Mouse 10kb plasmid UUGC1M library Mus ... 44 7.4 1
(AZ394209) 1M0157J11R Mouse 10kb plasmid UUGC1M library Mus ... 44 7.4 1
(ET908822) CHO_OF345xn11r1.ab1 CHO_OF Nicotiana tabacum geno... 44 7.4 1
(ET850764) CHO_OF099xd11r1.ab1 CHO_OF Nicotiana tabacum geno... 44 7.4 1
(EK239200) 1095460214951 Global-Ocean-Sampling_GS-31-01-01-1... 44 7.4 1
(EJ772089) 1092970403757 Global-Ocean-Sampling_GS-30-02-01-1... 44 7.4 1
(EJ573762) 1092960076174 Global-Ocean-Sampling_GS-29-01-01-1... 44 7.4 1
(EJ431748) 1093015260808 Global-Ocean-Sampling_GS-28-01-01-1... 44 7.4 1
(EJ350445) 1092963582580 Global-Ocean-Sampling_GS-28-01-01-1... 44 7.4 1
(EI941274) VUH2-81F22TR VUUBBa (VUH2) Vigna unguiculata geno... 44 7.4 1
(ED698149) GM_WBb0038H22.r GM_WBb Glycine max genomic clone ... 44 7.4 1
(ED685357) GM_WBb0020B24.r GM_WBb Glycine max genomic clone ... 44 7.4 1
(DU031227) 12487 Tomato HindIII BAC Library Solanum lycopers... 44 7.4 1
(CZ511688) GMW2-38H22a.g1 GMW2 Glycine max genomic, genomic ... 44 7.4 1
(CZ500227) GMW2-20B24a.g1 GMW2 Glycine max genomic, genomic ... 44 7.4 1
(CT229145) Sus scrofa genomic clone PigE-1B7, genomic survey... 44 7.4 1
(CT152949) Sus scrofa genomic clone PigE-177G17, genomic sur... 44 7.4 1
(EH476037) FDR103-P00052-DEPE-R_E01 FDR103 Danio rerio cDNA ... 44 7.4 1
(EH450233) FDR103-P00052-DEPE-F_E01 FDR103 Danio rerio cDNA ... 44 7.4 1
(DT080923) AGENCOURT_56124931 NIH_ZGC_10 Danio rerio cDNA cl... 44 7.4 1
(CV048088) EST 13405 Ripe Apricot Fruit Lambda Zap II Librar... 44 7.4 1
(CD486166) CFUS6.4H09 Cotton Root and Hypocotyl tissues infe... 44 7.4 1
(CB824009) EST 5233 Ripe Apricot Fruit Lambda Zap II Library... 44 7.4 1
(GR145015) CCBX23354.b1 CCBX Mimulus guttatus IM62 floral bu... 44 7.4 1
(GR143137) CCBX22288.b1 CCBX Mimulus guttatus IM62 floral bu... 44 7.4 1
(GR016863) CCIC6912.b1 CCIC Mimulus guttatus IM62 roots (H) ... 44 7.4 1
(GO297016) CAZC4189.fwd CAZC Teleopsis dalmanni Mid-pupal ey... 44 7.4 1
(FG296564) 1108793260820 New World Screwworm Larvae 9387 EST... 44 7.4 1
(AE008384) Methanosarcina mazei strain Goe1, complete genome. 44 7.4 1
(AC235412) Glycine max strain Williams 82 clone GM_WBb0129K0... 36 7.7 5
(AC235367) Glycine max strain Williams 82 clone GM_WBb0103G0... 36 7.7 5
(AC235757) Medicago truncatula, pooled multiple clones, *** ... 36 7.7 5
(CA856213) PfESToac58e01.y1 Plasmodium falciparum 3D7 gameto... 40 8.0 2
(CA855988) PfESToac52f12.y1 Plasmodium falciparum 3D7 gameto... 40 8.3 2
(EU795178) Uncultured bacterium HF0010_09O16 genomic sequence. 34 8.4 4
(CA854878) PfESToac15c07.y1 Plasmodium falciparum 3D7 gameto... 40 8.4 2
(BM274260) PfESToaa43a02.y1 Plasmodium falciparum 3D7 gameto... 40 8.6 2
(CA856198) PfESToac58c02.y1 Plasmodium falciparum 3D7 gameto... 40 8.7 2
>(AU269033) Dictyostelium discoideum vegetative cDNA clone:VSI654,
3' end single read.
Length = 559
Score = 1015 bits (512), Expect(2) = 0.0
Identities = 517/519 (99%)
Strand = Plus / Plus
Query: 41 ccaattcaattattggttccaggagtaattcaaaataaaggtgatgaaatgttagaacaa 100
|||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||
Sbjct: 40 ccaattcaattattggtttcaggagtaattcaaaataaaggtgatgnaatgttagaacaa 99
Query: 101 attaaaaaatatttaaaagagaatagaaattgtaaaagtgtaatatttaatgcattttca 160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 attaaaaaatatttaaaagagaatagaaattgtaaaagtgtaatatttaatgcattttca 159
Query: 161 aatggtggtggattttattatgcacatatgattcgtcaaattcatgaaagagaggattgc 220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 aatggtggtggattttattatgcacatatgattcgtcaaattcatgaaagagaggattgc 219
Query: 221 aagtggatggctcctttggtaaagggaactgtgttggattcgttgcctgcaattagacca 280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 aagtggatggctcctttggtaaagggaactgtgttggattcgttgcctgcaattagacca 279
Query: 281 ttatccatctattcagcattccgtttaactagtccaaatatgtttgtaactttcttatta 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 ttatccatctattcagcattccgtttaactagtccaaatatgtttgtaactttcttatta 339
Query: 341 gcattggtagtaccattatttgtagttttattttggagtaagatgtcatcgtatcaacaa 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 gcattggtagtaccattatttgtagttttattttggagtaagatgtcatcgtatcaacaa 399
Query: 401 attttaacctcaaaaaagaatcaatggcaacatttaattttctattcaaaagctgatact 460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 attttaacctcaaaaaagaatcaatggcaacatttaattttctattcaaaagctgatact 459
Query: 461 atagttcattctgatgatatcgataatttagttggtaaaataaagaataatttatcagat 520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 atagttcattctgatgatatcgataatttagttggtaaaataaagaataatttatcagat 519
Query: 521 gtcaatcatctagattataaatgtttcgacgattcacca 559
|||||||||||||||||||||||||||||||||||||||
Sbjct: 520 gtcaatcatctagattataaatgtttcgacgattcacca 558
Score = 75.8 bits (38), Expect(2) = 0.0
Identities = 41/41 (100%)
Strand = Plus / Plus
Query: 1 agaaaangtggtttcaatacattttcattttgttcaaaacc 41
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agaaaangtggtttcaatacattttcattttgttcaaaacc 41
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 108600042
Number of Hits to DB: 943,203,295
Number of extensions: 59381083
Number of successful extensions: 5371263
Number of sequences better than 10.0: 159
Length of query: 700
Length of database: 106,710,029,556
Length adjustment: 24
Effective length of query: 676
Effective length of database: 104,103,628,548
Effective search space: 70374052898448
Effective search space used: 70374052898448
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
Dictyostelium discoideum cDNA Project Home