Dictyostelium discoideum cDNA Contig-U10458-1

Assembled

Chromosomal Location of Contig-U10458-1

Sequence Contig-U10458-1

AATCGTTGTT AAATTTTTGA GAAAGACCTT CAAATAAAAA GAGTTTTTTT
CTTTTTATTT TATATTTATT TTTATTTTCT ATTTTTTGTT TTATTTATAT
ATATATTTAC AAAATGTCAA AAAATGATAA AAAAAATAAA CAAAGTGGAT
CATCCAATAT GGATCAATTA AAAAGTGAAG ATATTCTTCA AGCAGTTGTT
TTAGGTGATA GTTTTGATAG AAAATTCGCA CCAATCACTT TAGAAAAACC
AAGAACATTA TTACCATTAG TTAATATACC ATTATTAGAT TATACATTAG
AATTTTTAGC AGCATCAGGA GTACAACAAA TATTTGTATT TTGTTGTGCA
CATGCATCAC AAATTAAAGA ATATATTCAA TCATCAAGAT GGCATGATCT
TCCAGGTGTT CAAGTAATTT GTATGACAGG TTCAAATTGT AGAACTACAG
GTGATGCTCT TCGTGGTGTT TATGATGCTC AAGTCATTCA ATCAGATTTC
ATTCTAATCT CTGGTGATGT TGTTTCAAAT ATGAATTTAC AAAAAGCATT
ACAAATTCAT AAGGATAGAA GAGAATTAGA TAAAAATAAT ATTATGACTA
TGGTATATAA ACAAGCATCA TCAACACATA GAACTAGAAG TAAACAAGAT
GATACAGTTA TTTGGTGTAA TAGAGATACT ATGCAAGTTG TATGTTATGA
TAATTCACCA AGTAAGAAGA AATCATCGAT TAGTGTTGAA TTGTTTCAAA
AACATCCATC TATTCAAATG AGATATGATT TAATCGATTG TCATATCGAT
ATTTGTTCAC CAGAGGTATT GGCATTGTTT AATGATAATT TTGATTTTGC
AGACATTCGT AAGGATTTCA TTCACGATAT TCTCACCAGT GATCTATTGG
ATTACAAATT GTCAGCCTAC GTTTTACAAG GTGAATACGC CGCAAGAGTT
AAAGATTTAC GTACCTACCA TTCCGTTAGT AAGGATATCA TTCACCGTTG
GACATTCCCA ATGGTGCCAG ATAACAATTT CATGTGCAAT TCAAGTTATT
CATTATCCCG TCAAATGATT TACAAAGAGA AGAATGTGAA ATTGTTGGGT
GATTGTTTGA TCTCTGATGA GACTGTTATT GGAACTCAAA CTGAGATTGG
CGCTGGTTCA ATCGTTAGTC ATTCAACTAT CGGTAGAAAT TGTATCATTG
GTAAGAATGT CAAAATCAAT GGTTCCTACA TTTGGGATGA TGTCACCATT
CAAGATAATG CAATCATTGA TCATTCAATC ATTTGCAATG GTTCCATCAT
TAAATCATCC TCTATCATTG GTCGTGGTTC AATCATTGGT TTCAATGTTT
ACATTGGTCA ATCGAAAACA TTAGAACCTT TCTCAAAAAT TACAATGGCT
CAATATAATG AAGATGAAGA TGATGAAGAA TTATTAGAAG AATATTTTAA
AGAAATAATT TAA

Translated Amino Acid Sequence Contig-U10458-1

sllnf*ERPSNKKSFFLFILYLFLFSIFCFIYIYIYKMSKNDKKNKQSGSSNMDQLKSED
ILQAVVLGDSFDRKFAPITLEKPRTLLPLVNIPLLDYTLEFLAASGVQQIFVFCCAHASQ
IKEYIQSSRWHDLPGVQVICMTGSNCRTTGDALRGVYDAQVIQSDFILISGDVVSNMNLQ
KALQIHKDRRELDKNNIMTMVYKQASSTHRTRSKQDDTVIWCNRDTMQVVCYDNSPSKKK
SSISVELFQKHPSIQMRYDLIDCHIDICSPEVLALFNDNFDFADIRKDFIHDILTSDLLD
YKLSAYVLQGEYAARVKDLRTYHSVSKDIIHRWTFPMVPDNNFMCNSSYSLSRQMIYKEK
NVKLLGDCLISDETVIGTQTEIGAGSIVSHSTIGRNCIIGKNVKINGSYIWDDVTIQDNA
IIDHSIICNGSIIKSSSIIGRGSIIGFNVYIGQSKTLEPFSKITMAQYNEDEDDEELLEE
YFKEII*

Homology Contig-U10458-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U10458-1 (Contig-U10458-1Q) /CSM_Contig/Conti...  2631  0.0
Contig-U12155-1 (Contig-U12155-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U11507-1 (Contig-U11507-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U09825-1 (Contig-U09825-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U01096-1 (Contig-U01096-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U14010-1 (Contig-U14010-1Q) /CSM_Contig/Conti...    40  0.007
Contig-U13371-1 (Contig-U13371-1Q) /CSM_Contig/Conti...    40  0.007
Contig-U11875-1 (Contig-U11875-1Q) /CSM_Contig/Conti...    40  0.007
Contig-U11342-1 (Contig-U11342-1Q) /CSM_Contig/Conti...    40  0.007
Contig-U11110-1 (Contig-U11110-1Q) /CSM_Contig/Conti...    40  0.007

Homology Contig-U10458-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ435018) Dictyostelium discoideum cDNA clone:ddv25d24, 3' ...  1354   0.0    1
(BJ416323) Dictyostelium discoideum cDNA clone:ddv25d24, 5' ...  1257   0.0    1
(BJ415337) Dictyostelium discoideum cDNA clone:ddv22b08, 5' ...   973   0.0    2
(FF433532) G142P60165RE6.T0 Acorn worm juvenile pCMVSport6 l...    46   3e-04  2
(FF431492) G142P60134RC10.T0 Acorn worm juvenile pCMVSport6 ...    46   3e-04  2
(BM162322) EST564845 PyBS Plasmodium yoelii yoelii cDNA clon...    50   0.005  2
(FF607416) G825P5133RG8.T0 Acorn worm normalized gastrula pE...    40   0.014  2
(FF627333) G825P5327RA10.T0 Acorn worm normalized gastrula p...    40   0.014  2
(ER516033) 1093015516467 Global-Ocean-Sampling_GS-35-01-01-1...    52   0.065  1
(EC823319) SME00003776 esmbsro2 Sawyeria marylandensis cDNA,...    52   0.065  1

Homology Contig-U10458-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q54RF3) RecName: Full=Translation initiation factor eIF-2B subu...   826   0.0
(P56287) RecName: Full=Probable translation initiation factor eI...   367   e-100
(P87163) RecName: Full=Translation initiation factor eIF-2B subu...   343   9e-93
CR382121_176(CR382121|pid:none) Kluyveromyces lactis strain NRRL...   336   1e-90
AK065919_1(AK065919|pid:none) Oryza sativa Japonica Group cDNA c...   333   7e-90
CR382139_612(CR382139|pid:none) Debaryomyces hansenii strain CBS...   333   1e-89
AC004238_19(AC004238|pid:none) Arabidopsis thaliana chromosome 2...   332   2e-89
CP000496_934(CP000496|pid:none) Pichia stipitis CBS 6054 chromos...   329   2e-88
AM920437_430(AM920437|pid:none) Penicillium chrysogenum Wisconsi...   318   2e-85
CU928170_332(CU928170|pid:none) Kluyveromyces thermotolerans str...   314   6e-84