Homology Contig-U10447-1 vs Protein
Query= Contig-U10447-1 (Contig-U10447-1Q) /CSM_Contig/Contig-U10447-1Q.Seq.d
(1124 letters)
Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT077474_1(BT077474|pid:none) Lepeophtheirus salmonis clone lsal... 223 1e-61
EU281316_1(EU281316|pid:none) Mus musculus Ran binding protein 1... 204 3e-56
AK173177_1(AK173177|pid:none) Mus musculus mRNA for mKIAA1464 pr... 204 3e-56
(Q6VN20) RecName: Full=Ran-binding protein 10; Short=Ra... 204 3e-56
BC167487_1(BC167487|pid:none) Xenopus laevis hypothetical protei... 202 6e-56
BC130175_1(BC130175|pid:none) Xenopus laevis hypothetical protei... 202 6e-56
EU918289_1(EU918289|pid:none) Felis catus Ran binding protein 10... 201 2e-55
BC165240_1(BC165240|pid:none) Danio rerio RAN binding protein 9,... 200 3e-55
(Q1LUS8) RecName: Full=Ran-binding protein 10; Short=Ra... 199 6e-55
(Q4Z8K6) RecName: Full=Ran-binding proteins 9/10 homolog; AltNam... 200 8e-55
BT083453_1(BT083453|pid:none) Drosophila melanogaster RH09117 fu... 200 8e-55
AE013599_1132(AE013599|pid:none) Drosophila melanogaster chromos... 200 8e-55
AE013599_1133(AE013599|pid:none) Drosophila melanogaster chromos... 200 8e-55
BC052781_1(BC052781|pid:none) Homo sapiens RAN binding protein 9... 199 1e-54
(P69566) RecName: Full=Ran-binding protein 9; Short=Ran... 199 1e-54
AK132714_1(AK132714|pid:none) Mus musculus adult male testis cDN... 199 1e-54
BC019886_1(BC019886|pid:none) Homo sapiens RAN binding protein 9... 199 1e-54
BT059319_1(BT059319|pid:none) Salmo salar clone ssal-rgf-541-066... 198 1e-54
AP007169_491(AP007169|pid:none) Aspergillus oryzae RIB40 genomic... 194 1e-51
EF678307_1(EF678307|pid:none) Picea sitchensis clone WS02913_N04... 205 2e-51
EU967151_1(EU967151|pid:none) Zea mays clone 299831 ran-binding ... 204 3e-51
AK295530_1(AK295530|pid:none) Homo sapiens cDNA FLJ58184 complet... 204 6e-51
CU640366_96(CU640366|pid:none) Podospora anserina genomic DNA ch... 200 6e-50
AB008515_1(AB008515|pid:none) Homo sapiens mRNA for RanBPM, comp... 199 2e-49
AY973544_1(AY973544|pid:none) Drosophila melanogaster clone RE54... 198 3e-49
AP004017_11(AP004017|pid:none) Oryza sativa Japonica Group genom... 188 3e-46
AK304030_1(AK304030|pid:none) Homo sapiens cDNA FLJ61049 complet... 169 8e-46
AM920436_1204(AM920436|pid:none) Penicillium chrysogenum Wiscons... 175 1e-44
AY039919_1(AY039919|pid:none) Arabidopsis thaliana unknown prote... 177 5e-43
AC023064_4(AC023064|pid:none) Arabidopsis thaliana chromosome 1 ... 174 7e-42
AB015640_1(AB015640|pid:none) Cricetinae gen. sp. RanBPM mRNA, p... 151 4e-35
EU953391_1(EU953391|pid:none) Zea mays clone 1406321 unknown mRNA. 151 5e-35
CP000882_97(CP000882|pid:none) Hemiselmis andersenii chromosome ... 120 9e-30
AJ010592_17(AJ010592|pid:none) Guillardia theta DNA for complete... 117 5e-29
AL032643_6(AL032643|pid:none) Caenorhabditis elegans YAC Y54E5A,... 130 8e-29
AK298806_1(AK298806|pid:none) Homo sapiens cDNA FLJ58041 complet... 112 2e-23
EU964069_1(EU964069|pid:none) Zea mays clone 275690 hypothetical... 105 3e-21
EF084667_1(EF084667|pid:none) Picea sitchensis clone WS02722_M17... 101 5e-20
BT046505_1(BT046505|pid:none) Salmo salar clone ssal-rgb2-545-32... 99 2e-19
(Q5ZKQ7) RecName: Full=Protein C20orf11 homolog; &AJ720027_1(AJ... 99 4e-19
(Q32L52) RecName: Full=Protein C20orf11 homolog; &BC109762_1(BC... 98 5e-19
(Q9D7M1) RecName: Full=Protein C20orf11 homolog; AltName: Full=T... 98 6e-19
(Q9NWU2) RecName: Full=Protein C20orf11; AltName: Full=Two hybri... 98 6e-19
BT057510_1(BT057510|pid:none) Salmo salar clone ssal-evd-536-009... 98 6e-19
BT053577_1(BT053577|pid:none) Medicago truncatula clone MTYFT1G-... 97 8e-19
AM910990_143(AM910990|pid:none) Plasmodium knowlesi strain H chr... 86 2e-17
CP001574_585(CP001574|pid:none) Micromonas sp. RCC299 chromosome... 88 5e-17
AL117386_7(AL117386|pid:none) Arabidopsis thaliana DNA chromosom... 89 3e-16
CR380955_166(CR380955|pid:none) Candida glabrata strain CBS138 c... 88 6e-16
AM055942_13(AM055942|pid:none) Toxoplasma gondii RH, genomic DNA... 86 2e-15
AY811908_1(AY811908|pid:none) Schistosoma japonicum SJCHGC07953 ... 72 3e-15
AK317144_1(AK317144|pid:none) Arabidopsis thaliana AT1G61150 mRN... 84 7e-15
AK228143_1(AK228143|pid:none) Arabidopsis thaliana mRNA for hypo... 84 7e-15
(P18160) RecName: Full=Dual specificity protein kinase dpyk1; ... 84 1e-14
T18276(T18276;A35670) protein-tyrosine kinase (EC 2.7.1.112) 1 -... 84 1e-14
AE017348_62(AE017348|pid:none) Cryptococcus neoformans var. neof... 82 3e-14
EF083725_1(EF083725|pid:none) Picea sitchensis clone WS0298_P07 ... 81 8e-14
(P53076) RecName: Full=Vacuolar import and degradation protein 3... 80 1e-13
DQ311247_1(DQ311247|pid:none) Bombyx mori BWK-1-like protein mRN... 79 2e-13
(Q54X16) RecName: Full=UPF0559 protein; 77 1e-12
AE014298_2871(AE014298|pid:none) Drosophila melanogaster chromos... 76 2e-12
CU928181_362(CU928181|pid:none) Zygosaccharomyces rouxii strain ... 74 7e-12
AE016819_475(AE016819|pid:none) Ashbya gossypii (= Eremothecium ... 73 2e-11
AM494972_665(AM494972|pid:none) Leishmania braziliensis chromoso... 64 6e-11
(A6S3E0) RecName: Full=Protein ssh4; 68 6e-11
AM502254_15(AM502254|pid:none) Leishmania infantum chromosome 36. 64 1e-10
AK055727_1(AK055727|pid:none) Homo sapiens cDNA FLJ31165 fis, cl... 70 1e-10
BC151931_1(BC151931|pid:none) Danio rerio zgc:171696, mRNA (cDNA... 68 7e-10
BC073489_1(BC073489|pid:none) Xenopus laevis hypothetical protei... 67 1e-09
BC129521_1(BC129521|pid:none) Xenopus laevis hypothetical protei... 67 1e-09
BC106681_1(BC106681|pid:none) Xenopus laevis hypothetical protei... 66 2e-09
AB170244_1(AB170244|pid:none) Macaca fascicularis brain cDNA clo... 66 3e-09
AK146689_1(AK146689|pid:none) Mus musculus 17 days embryo heart ... 66 3e-09
AY069048_1(AY069048|pid:none) Drosophila melanogaster GH05607 fu... 63 2e-08
AJ251757_1(AJ251757|pid:none) Globodera rostochiensis mRNA for f... 62 2e-08
T33951(T33951)hypothetical protein F53E2.1 - Caenorhabditis eleg... 61 6e-08
(Q1E2D2) RecName: Full=Protein SSH4; 61 8e-08
AM920431_1340(AM920431|pid:none) Penicillium chrysogenum Wiscons... 57 9e-08
CR382127_581(CR382127|pid:none) Yarrowia lipolytica strain CLIB1... 53 3e-07
AP007151_1060(AP007151|pid:none) Aspergillus oryzae RIB40 genomi... 59 3e-07
BC128750_1(BC128750|pid:none) Rattus norvegicus cDNA clone IMAGE... 59 3e-07
AM920437_917(AM920437|pid:none) Penicillium chrysogenum Wisconsi... 59 4e-07
BC025530_1(BC025530|pid:none) Mus musculus ring finger protein 1... 58 5e-07
BC057082_1(BC057082|pid:none) Mus musculus ring finger protein 1... 58 5e-07
(Q5XPI3) RecName: Full=E3 ubiquitin-protein ligase RNF123; ... 58 5e-07
FN357307_35(FN357307|pid:none) Schistosoma mansoni genome sequen... 58 7e-07
(Q4WRW0) RecName: Full=Protein ssh4; 57 9e-07
AM270249_4(AM270249|pid:none) Aspergillus niger contig An11c0320... 57 9e-07
AP004009_24(AP004009|pid:none) Oryza sativa Japonica Group genom... 57 9e-07
BC130632_1(BC130632|pid:none) Homo sapiens ring finger protein 1... 56 2e-06
BC110714_1(BC110714|pid:none) Xenopus laevis hypothetical protei... 54 8e-06
FJ882997_1(FJ882997|pid:none) Globodera pallida clone GPS10-17 R... 54 1e-05
EF423902_1(EF423902|pid:none) Globodera pallida strain Rookmaker... 53 2e-05
FJ882985_1(FJ882985|pid:none) Globodera pallida clone PUKE-3 RBP... 53 2e-05
FJ882995_1(FJ882995|pid:none) Globodera pallida clone GPS9-13 RB... 53 2e-05
AM491356_1(AM491356|pid:none) Globodera pallida partial mRNA for... 53 2e-05
EF423896_1(EF423896|pid:none) Globodera pallida strain D383 clas... 53 2e-05
FJ882990_1(FJ882990|pid:none) Globodera pallida clone GPS7-6 RBP... 53 2e-05
FJ882992_1(FJ882992|pid:none) Globodera pallida clone GPS7-8 RBP... 53 2e-05
FJ392677_1(FJ392677|pid:none) Globodera pallida clone Chav-7 RBP... 53 2e-05
EF423893_1(EF423893|pid:none) Globodera pallida strain D383 clas... 53 2e-05
CR382139_855(CR382139|pid:none) Debaryomyces hansenii strain CBS... 53 2e-05
AM491354_1(AM491354|pid:none) Globodera pallida partial mRNA for... 52 3e-05
FJ882988_1(FJ882988|pid:none) Globodera pallida clone GPS4-12 RB... 52 3e-05
EF423897_1(EF423897|pid:none) Globodera pallida strain Rookmaker... 52 3e-05
FJ810124_1(FJ810124|pid:none) Globodera pallida clone 24D4 RBP-4... 52 3e-05
AM491352_1(AM491352|pid:none) Globodera pallida mRNA for rbp-1 p... 52 3e-05
CP001330_422(CP001330|pid:none) Micromonas sp. RCC299 chromosome... 52 3e-05
FJ392678_1(FJ392678|pid:none) Globodera pallida clone Chav-6 RBP... 52 3e-05
AC159449_13(AC159449|pid:none) Trypanosoma brucei chromosome 4 c... 52 5e-05
EF423898_1(EF423898|pid:none) Globodera pallida strain Rookmaker... 51 8e-05
FJ882986_1(FJ882986|pid:none) Globodera pallida clone GUIC-3 RBP... 51 8e-05
FJ882991_1(FJ882991|pid:none) Globodera pallida clone GPS7-7 RBP... 50 1e-04
FJ882996_1(FJ882996|pid:none) Globodera pallida clone GPS10-16 R... 50 1e-04
EF423901_1(EF423901|pid:none) Globodera pallida strain Rookmaker... 50 1e-04
EF423895_1(EF423895|pid:none) Globodera pallida strain D383 clas... 50 1e-04
AM491355_1(AM491355|pid:none) Globodera pallida partial mRNA for... 50 1e-04
EF423900_1(EF423900|pid:none) Globodera pallida strain Rookmaker... 50 1e-04
AP007154_587(AP007154|pid:none) Aspergillus oryzae RIB40 genomic... 50 2e-04
FJ392679_1(FJ392679|pid:none) Globodera mexicana clone 1 RBP1 (r... 49 2e-04
FJ810125_1(FJ810125|pid:none) Globodera pallida clone 33H17 RBP-... 49 3e-04
EU982199_1(EU982199|pid:none) Globodera pallida isolate Guiclan ... 49 4e-04
AM270408_42(AM270408|pid:none) Aspergillus niger contig An18c016... 48 5e-04
FJ810122_1(FJ810122|pid:none) Globodera pallida clone 13G11 RBP-... 48 5e-04
EF423894_1(EF423894|pid:none) Globodera pallida strain D383 clas... 48 5e-04
FN357582_8(FN357582|pid:none) Schistosoma mansoni genome sequenc... 48 7e-04
(Q2H991) RecName: Full=Protein FYV10; 47 0.001
FN357435_14(FN357435|pid:none) Schistosoma mansoni genome sequen... 47 0.001
FM992691_417(FM992691|pid:none) Candida dubliniensis CD36 chromo... 47 0.002
BC008570_1(BC008570|pid:none) Mus musculus DEAD (Asp-Glu-Ala-Asp... 46 0.002
AK132157_1(AK132157|pid:none) Mus musculus 14, 17 days embryo he... 46 0.002
(Q641Y8) RecName: Full=ATP-dependent RNA helicase DDX1; ... 45 0.004
AF222733_1(AF222733|pid:none) Rattus norvegicus DEAD box protein... 45 0.004
CR954206_481(CR954206|pid:none) Ostreococcus tauri strain OTTH05... 45 0.004
(Q91VR5) RecName: Full=ATP-dependent RNA helicase DDX1; ... 45 0.004
CP001327_453(CP001327|pid:none) Micromonas sp. RCC299 chromosome... 45 0.005
FN357552_2(FN357552|pid:none) Schistosoma mansoni genome sequenc... 45 0.006
AP007255_4276(AP007255|pid:none) Magnetospirillum magneticum AMB... 40 0.006
(Q0IIK5) RecName: Full=ATP-dependent RNA helicase DDX1; ... 44 0.008
(Q92499) RecName: Full=ATP-dependent RNA helicase DDX1; ... 44 0.008
CR382124_413(CR382124|pid:none) Kluyveromyces lactis strain NRRL... 44 0.008
AK298426_1(AK298426|pid:none) Homo sapiens cDNA FLJ51031 complet... 44 0.008
AK298212_1(AK298212|pid:none) Homo sapiens cDNA FLJ51017 partial... 44 0.008
BT030738_1(BT030738|pid:none) Bos taurus DEAD (Asp-Glu-Ala-Asp) ... 44 0.008
AL590442_99(AL590442|pid:none) chromosome II of strain GB-M1 of ... 44 0.008
AK297432_1(AK297432|pid:none) Homo sapiens cDNA FLJ57326 complet... 44 0.008
BC084742_1(BC084742|pid:none) Xenopus laevis scaffold attachment... 44 0.010
CU928170_406(CU928170|pid:none) Kluyveromyces thermotolerans str... 44 0.013
U53150_10(U53150|pid:none) Caenorhabditis elegans cosmid F20A1, ... 39 0.013
AF068847_1(AF068847|pid:none) Xenopus laevis scaffold attachment... 43 0.018
CP000586_435(CP000586|pid:none) Ostreococcus lucimarinus CCE9901... 43 0.023
(Q90WU3) RecName: Full=ATP-dependent RNA helicase DDX1; ... 43 0.023
A97312(A97312) membrane associated methyl-accepting chemotaxis p... 43 0.023
CU928173_298(CU928173|pid:none) Zygosaccharomyces rouxii strain ... 42 0.030
CU633454_248(CU633454|pid:none) Podospora anserina genomic DNA c... 42 0.030
CR382126_739(CR382126|pid:none) Kluyveromyces lactis strain NRRL... 42 0.039
Z49705_20(Z49705|pid:none) S.cerevisiae chromosome XIII cosmid 8... 41 0.067
U34773_1(U34773|pid:none) Drosophila melanogaster DEAD-box prote... 41 0.067
(Q03212) RecName: Full=Protein EAR1; AltName: Full=Endosomal ada... 41 0.067
CR382136_522(CR382136|pid:none) Debaryomyces hansenii strain CBS... 41 0.087
BC167650_1(BC167650|pid:none) Xenopus tropicalis heterogeneous n... 41 0.087
BC158418_1(BC158418|pid:none) Xenopus tropicalis heterogeneous n... 41 0.087
AC024830_10(AC024830|pid:none) Caenorhabditis elegans cosmid Y55... 40 0.11
(Q9VNV3) RecName: Full=ATP-dependent RNA helicase Ddx1; ... 40 0.15
AK291315_1(AK291315|pid:none) Homo sapiens cDNA FLJ78309 complet... 40 0.15
CP001357_965(CP001357|pid:none) Brachyspira hyodysenteriae WA1, ... 39 0.25
AM179409_1(AM179409|pid:none) Chondromyces crocatus chondramide ... 39 0.25
(Q5XH91) RecName: Full=ATP-dependent RNA helicase DDX1; ... 39 0.25
BC009988_1(BC009988|pid:none) Homo sapiens heterogeneous nuclear... 39 0.33
BC114691_1(BC114691|pid:none) Bos taurus heterogeneous nuclear r... 39 0.33
BC078642_1(BC078642|pid:none) Mus musculus heterogeneous nuclear... 39 0.33
AJ007509_1(AJ007509|pid:none) Homo sapiens mRNA for E1B-55kDa-as... 39 0.33
BC027713_1(BC027713|pid:none) Homo sapiens heterogeneous nuclear... 39 0.33
AK155604_1(AK155604|pid:none) Mus musculus B6-derived CD11 +ve d... 39 0.33
AK291762_1(AK291762|pid:none) Homo sapiens cDNA FLJ78252 complet... 39 0.33
AX882507_1(AX882507|pid:none) Sequence 17412 from Patent EP10746... 39 0.33
AK290729_1(AK290729|pid:none) Homo sapiens cDNA FLJ75163 complet... 39 0.33
BC002564_1(BC002564|pid:none) Homo sapiens heterogeneous nuclear... 39 0.33
(Q8VDM6) RecName: Full=Heterogeneous nuclear ribonucleoprotein U... 39 0.33
AM270258_7(AM270258|pid:none) Aspergillus niger contig An12c0010... 39 0.33
BT030999_1(BT030999|pid:none) Drosophila melanogaster LP04379 fu... 39 0.43
CP000962_3002(CP000962|pid:none) Clostridium botulinum A3 str. L... 38 0.57
AB169385_1(AB169385|pid:none) Macaca fascicularis testis cDNA, c... 38 0.57
AM502249_174(AM502249|pid:none) Leishmania infantum chromosome 31. 38 0.74
BC172909_1(BC172909|pid:none) Synthetic construct Homo sapiens c... 37 0.97
(Q15751) RecName: Full=Probable E3 ubiquitin-protein ligase HERC... 37 0.97
(A4RK04) RecName: Full=Protein FYV10; 37 0.97
AB001025_1(AB001025|pid:none) Homo sapiens mRNA for brain ryanod... 37 0.97
AK083444_1(AK083444|pid:none) Mus musculus 9 days embryo whole b... 37 0.97
AM502250_445(AM502250|pid:none) Leishmania infantum chromosome 32. 37 0.97
CR382139_797(CR382139|pid:none) Debaryomyces hansenii strain CBS... 37 0.97
(Q15413) RecName: Full=Ryanodine receptor 3; Short=RYR-... 37 0.97
S74173(S74173)ryanodine receptor 3 - Mustela sp. 37 1.3
AF098788_1(AF098788|pid:none) Gallus gallus nuclear calmodulin-b... 37 1.3
CP001279_159(CP001279|pid:none) Nautilia profundicola AmH, compl... 37 1.3
FN357480_10(FN357480|pid:none) Schistosoma mansoni genome sequen... 37 1.6
CP000497_639(CP000497|pid:none) Pichia stipitis CBS 6054 chromos... 37 1.6
FN357480_7(FN357480|pid:none) Schistosoma mansoni genome sequenc... 37 1.6
(A2VD92) RecName: Full=ATP-dependent RNA helicase DDX1; ... 36 2.2
BC117608_1(BC117608|pid:none) Danio rerio heterogeneous nuclear ... 36 2.2
EU177006_1(EU177006|pid:none) Meleagris gallopavo skeletal muscl... 36 2.2
X95267_1(X95267|pid:none) G.gallus mRNA for ryanodine receptor t... 36 2.2
S66572(S66572)ryanodine receptor type 3 - chicken 36 2.2
CP000780_354(CP000780|pid:none) Candidatus Methanoregula boonei ... 36 2.8
(Q00PI9) RecName: Full=Heterogeneous nuclear ribonucleoprotein U... 36 2.8
BC152909_1(BC152909|pid:none) Synthetic construct Mus musculus c... 36 2.8
(P32343) RecName: Full=Protein SSH4; AltName: Full=Suppressor of... 36 2.8
S44213_5(S44213|pid:none) YKL522=mitochondrial ADP/ATP carrier p... 36 2.8
BT059195_1(BT059195|pid:none) Salmo salar clone ssal-rgf-531-353... 35 3.7
AL731595_5(AL731595|pid:none) Oryza sativa genomic DNA, chromoso... 35 3.7
AB014514_1(AB014514|pid:none) Homo sapiens mRNA for KIAA0614 pro... 35 3.7
(Q1KMD3) RecName: Full=Heterogeneous nuclear ribonucleoprotein U... 35 3.7
(Q9Y4D8) RecName: Full=Probable E3 ubiquitin-protein ligase KIAA... 35 3.7
AP006628_330(AP006628|pid:none) Onion yellows phytoplasma OY-M D... 35 3.7
FN357483_26(FN357483|pid:none) Schistosoma mansoni genome sequen... 35 3.7
AK054654_1(AK054654|pid:none) Homo sapiens cDNA FLJ30092 fis, cl... 35 3.7
AM910992_106(AM910992|pid:none) Plasmodium knowlesi strain H chr... 35 3.7
Z95559_15(Z95559|pid:none) Caenorhabditis elegans YAC Y41E3, com... 35 3.7
AE014185_144(AE014185|pid:none) Plasmodium falciparum 3D7 chromo... 35 4.8
(Q6CP05) RecName: Full=Protein FYV10; &CR382125_372(CR382125|pi... 35 4.8
FM992692_162(FM992692|pid:none) Candida dubliniensis CD36 chromo... 35 4.8
AE015927_389(AE015927|pid:none) Clostridium tetani E88, complete... 35 4.8
FN392322_182(FN392322|pid:none) Pichia pastoris GS115 chromosome... 35 4.8
AP006852_360(AP006852|pid:none) Candida albicans genomic DNA, ch... 35 4.8
CP000081_534(CP000081|pid:none) Leishmania major chromosome 35, ... 35 4.8
CP000492_2148(CP000492|pid:none) Chlorobium phaeobacteroides DSM... 35 4.8
AM502253_540(AM502253|pid:none) Leishmania infantum chromosome 35. 35 6.3
CP000675_2194(CP000675|pid:none) Legionella pneumophila str. Cor... 35 6.3
CR380954_342(CR380954|pid:none) Candida glabrata strain CBS138 c... 34 8.2
BX284746_6(BX284746|pid:none) Neurospora crassa DNA linkage grou... 34 8.2
CP000560_1570(CP000560|pid:none) Bacillus amyloliquefaciens FZB4... 34 8.2
FN314027_1(FN314027|pid:none) Schistosoma japonicum isolate Anhu... 34 8.2
M27878_1(M27878|pid:none) Human DNA binding protein (HPF2) mRNA,... 34 8.2
CP001291_1045(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 34 8.2
B32891(B32891)finger protein 2, placental - human 34 8.2
>BT077474_1(BT077474|pid:none) Lepeophtheirus salmonis clone
lsal-evj-539-375 Ran-binding protein 10 putative mRNA,
complete cds.
Length = 477
Score = 223 bits (567), Expect(2) = 1e-61
Identities = 134/374 (35%), Positives = 198/374 (52%), Gaps = 46/374 (12%)
Frame = +3
Query: 69 QTMLLSRLPGWERNSFGYHGDDGNLFKGSGTGISYGPTYTTGDVVGCCINFVQGAIFFTK 248
Q + L+RLPGW++NS+GYHGDDG+ F SGTG SYGPT+TTGDV+GC +N + G+ F+TK
Sbjct: 109 QGVNLNRLPGWDKNSYGYHGDDGHSFCSSGTGQSYGPTFTTGDVIGCGVNLIDGSCFYTK 168
Query: 249 NGVPLGEATKEIKGLSLYPCVGLRTPGESLEANFGQRPFAFDVDQLFKEEKQRVIKTIKN 428
NG LG A +I ++YP VGL+TPGE ++ NFGQ PF FD++ E + R+ + I +
Sbjct: 169 NGHHLGIAFTDIPS-NMYPTVGLQTPGEVVDTNFGQEPFLFDIEGEVFEYRSRMHRIISD 227
Query: 429 ----TKTVEDDSISTQLVLSYLMHHGYSETVKLFAKATGTDGDSLNSQLDDIKNRQRISE 596
+ E I ++V SYL+HHGY T + F + T G ++ L +KNRQ + +
Sbjct: 228 FPVPGRHGEWQQILQKMVSSYLVHHGYCATAESFVRGT---GQQISEDLSSVKNRQAVRK 284
Query: 597 LLSKGNIDEVIKELDNIYPNFLTQNRDIQFKLLCQKFIEMIKTSPIEETMAFGQNQLSNF 776
L+ G + E I+ D +YP L ++F L + FIEM+ EE+ + G N SN
Sbjct: 285 LVLAGRLGEAIRLTDKLYPGLLESRPTLKFILKVRHFIEMVGGID-EESTSNGNNSASNG 343
Query: 777 SFE------------------------------------------SKECESNLNEIFSLI 830
S + ++E L + FSL+
Sbjct: 344 STDDNNKMDVDPPPLASNPHRLERLIHFGRCLQTMLTELETTNGKNEENTKMLQDAFSLL 403
Query: 831 AYSDPYTSPVSFLLEKSKRDQIINDLNCALLVYCHKPATPVLEKIVKQAKVAIDQVVYQN 1010
A+ DP+ SPV + L+ S+R+ I LN A+L P P LE + K + +++ N
Sbjct: 404 AHVDPWGSPVGWQLDSSQRESICTTLNSAILESKSLPGKPPLEISLGHIKKLV-KIMADN 462
Query: 1011 ASPAAAFINVKDFI 1052
AF +V DF+
Sbjct: 463 DLGTCAFADVDDFL 476
Score = 38.9 bits (89), Expect(2) = 1e-61
Identities = 13/20 (65%), Positives = 19/20 (95%)
Frame = +2
Query: 2 YYFEITVISKGRDGYIGIGV 61
YYFE+ ++SKGRDGY+G+G+
Sbjct: 87 YYFEVKIVSKGRDGYMGVGL 106
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 1,542,405,105
Number of extensions: 30592744
Number of successful extensions: 89460
Number of sequences better than 10.0: 235
Number of HSP's gapped: 89205
Number of HSP's successfully gapped: 309
Length of query: 374
Length of database: 1,040,966,779
Length adjustment: 130
Effective length of query: 244
Effective length of database: 624,409,729
Effective search space: 152355973876
Effective search space used: 152355973876
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
Dictyostelium discoideum cDNA Project Home