<Clone: Contig-U10447-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>

Dictyostelium discoideum cDNA Contig-U10447-1

Dictyostelium discoideum cDNA Project Home

Assembled

Chromosomal Location of Contig-U10447-1

< more Chromosomal info >

Chromosome Number 6
Length 3595308
Start Poin 1,996,979
End Point 1,995,844
Strand MINUS

Sequence Contig-U10447-1

TTATTATTTC GAAATAACAG TAATTAGTAA AGGTAGAGAT GGTTATATTG
GTATAGGTGT TTGTACTTCA AACTATGTTA TTATCTCGTT TACCTGGTTG
GGAAAGAAAT TCATTTGGAT ATCATGGTGA TGATGGTAAT TTATTTAAAG
GTTCAGGTAC AGGTATATCA TATGGACCAA CATATACAAC TGGAGATGTT
GTTGGATGTT GTATAAATTT TGTTCAAGGT GCAATATTTT TCACAAAGAA
TGGAGTACCA TTAGGAGAAG CAACCAAAGA GATAAAAGGA TTATCATTAT
ACCCATGTGT TGGACTTAGA ACACCTGGAG AATCATTAGA AGCAAACTTT
GGACAACGAC CTTTTGCATT TGATGTGGAT CAACTATTTA AAGAGGAGAA
ACAAAGAGTA ATAAAAACTA TTAAAAACAC GAAAACTGTA GAGGATGACT
CAATCTCTAC TCAATTGGTA CTCTCTTATT TAATGCATCA TGGTTATAGT
GAAACTGTTA AACTATTTGC AAAAGCTACT GGTACTGATG GTGATTCTTT
AAATTCACAA TTAGATGATA TAAAAAATAG ACAAAGAATA TCAGAATTAT
TATCAAAAGG GAATATAGAT GAAGTTATTA AAGAGTTGGA TAATATTTAT
CCAAATTTTT TAACACAAAA TAGAGATATT CAATTTAAAT TATTATGTCA
AAAGTTTATA GAGATGATTA AAACATCACC AATTGAAGAG ACGATGGCAT
TTGGACAAAA TCAACTATCA AACTTTTCAT TTGAGTCAAA AGAATGCGAA
TCAAACCTAA ATGAAATTTT CTCATTGATA GCTTATTCAG ATCCATATAC
AAGTCCAGTT TCATTTTTAT TAGAAAAGAG TAAAAGAGAT CAAATTATAA
ATGATTTAAA TTGCGCATTA TTAGTATATT GTCATAAACC AGCAACTCCT
GTTTTAGAGA AAATCGTTAA ACAAGCAAAA GTTGCTATTG ATCAAGTTGT
TTATCAAAAT GCNAGTCCCG CCGCTGCTTT CATTAATGTA AAAGATTTTA
TTGATGTGAT NATATTATTT AAATAAATAT TAAAATAAAT TAAATAATAA
AANATTAAAT AACAAACAAA AAAT

Translated Amino Acid Sequence Contig-U10447-1

<All Frames> 
iisk*q*lvkvemvilv*VFVLQTMLLSRLPGWERNSFGYHGDDGNLFKGSGTGISYGPT
YTTGDVVGCCINFVQGAIFFTKNGVPLGEATKEIKGLSLYPCVGLRTPGESLEANFGQRP
FAFDVDQLFKEEKQRVIKTIKNTKTVEDDSISTQLVLSYLMHHGYSETVKLFAKATGTDG
DSLNSQLDDIKNRQRISELLSKGNIDEVIKELDNIYPNFLTQNRDIQFKLLCQKFIEMIK
TSPIEETMAFGQNQLSNFSFESKECESNLNEIFSLIAYSDPYTSPVSFLLEKSKRDQIIN
DLNCALLVYCHKPATPVLEKIVKQAKVAIDQVVYQNASPAAAFINVKDFIDVXILFK*il
k*ik**xik*qtkn


Homology Contig-U10447-1 vs CSM-Contig

<more CONTIG info> 
Sequences producing significant alignments:                        (bits)  Value


Contig-U10447-1 (Contig-U10447-1Q) /CSM_Contig/Conti...  2089  0.0
Contig-U13531-1 (Contig-U13531-1Q) /CSM_Contig/Conti...    38  0.020
Contig-U12580-1 (Contig-U12580-1Q) /CSM_Contig/Conti...    38  0.020
Contig-U14788-1 (Contig-U14788-1Q) /CSM_Contig/Conti...    36  0.079
Contig-U12038-1 (Contig-U12038-1Q) /CSM_Contig/Conti...    36  0.079
Contig-U08919-1 (Contig-U08919-1Q) /CSM_Contig/Conti...    36  0.079
Contig-U05363-1 (Contig-U05363-1Q) /CSM_Contig/Conti...    36  0.079
Contig-U05167-1 (Contig-U05167-1Q) /CSM_Contig/Conti...    36  0.079
Contig-U04397-1 (Contig-U04397-1Q) /CSM_Contig/Conti...    36  0.079
Contig-U03274-1 (Contig-U03274-1Q) /CSM_Contig/Conti...    36  0.079


Homology Contig-U10447-1 vs DNA

<more DNA info> 
Sequences producing significant alignments:                  (bits) Value  N


(BJ433174) Dictyostelium discoideum cDNA clone:ddv21b05, 3' ...  1098   0.0    1
(BJ414962) Dictyostelium discoideum cDNA clone:ddv21b05, 5' ...  1009   0.0    2
(AU262535) Dictyostelium discoideum vegetative cDNA clone:VS...   872   0.0    2
(GR585808) CCAB1078.g1 CCAB Dictyostelium purpureum 0 hr sta...   133   1e-70  5
(GR581443) CBZZ1347.g1 CBZZ Dictyostelium purpureum 18 hr st...   133   2e-26  1
(GR585281) CCAA408.g1 CCAA Dictyostelium purpureum 0 hr star...   109   2e-19  1
(EY325902) CAWY11240.fwd CAWY Helobdella robusta Subtracted ...    66   3e-06  1
(FG542487) OtP020H11_021607f Onthophagus taurus pupal librar...    36   0.040  2
(CP000882) Hemiselmis andersenii chromosome 2, complete sequ...    52   0.050  1
(DN248454) ACAE-aaa31a18.g1 Hydra EST UCI 5 Hydra magnipapil...    38   0.075  3


Homology Contig-U10447-1 vs Protein

<more Protein info> 
Sequences producing significant alignments:                      (bits) Value


BT077474_1(BT077474|pid:none) Lepeophtheirus salmonis clone lsal...   223   1e-61
EU281316_1(EU281316|pid:none) Mus musculus Ran binding protein 1...   204   3e-56
AK173177_1(AK173177|pid:none) Mus musculus mRNA for mKIAA1464 pr...   204   3e-56
(Q6VN20) RecName: Full=Ran-binding protein 10;          Short=Ra...   204   3e-56
BC167487_1(BC167487|pid:none) Xenopus laevis hypothetical protei...   202   6e-56
BC130175_1(BC130175|pid:none) Xenopus laevis hypothetical protei...   202   6e-56
EU918289_1(EU918289|pid:none) Felis catus Ran binding protein 10...   201   2e-55
BC165240_1(BC165240|pid:none) Danio rerio RAN binding protein 9,...   200   3e-55
(Q1LUS8) RecName: Full=Ran-binding protein 10;          Short=Ra...   199   6e-55
(Q4Z8K6) RecName: Full=Ran-binding proteins 9/10 homolog; AltNam...   200   8e-55


<Clone: Contig-U10447-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>

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