Homology Contig-U10447-1 vs DNA
Query= Contig-U10447-1 (Contig-U10447-1Q) /CSM_Contig/Contig-U10447-1Q.Seq.d
(1124 letters)
Database: ddbj_A
108,600,042 sequences; 106,710,029,556 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ433174) Dictyostelium discoideum cDNA clone:ddv21b05, 3' ... 1098 0.0 1
(BJ414962) Dictyostelium discoideum cDNA clone:ddv21b05, 5' ... 1009 0.0 2
(AU262535) Dictyostelium discoideum vegetative cDNA clone:VS... 872 0.0 2
(GR585808) CCAB1078.g1 CCAB Dictyostelium purpureum 0 hr sta... 133 1e-70 5
(GR581443) CBZZ1347.g1 CBZZ Dictyostelium purpureum 18 hr st... 133 2e-26 1
(GR585281) CCAA408.g1 CCAA Dictyostelium purpureum 0 hr star... 109 2e-19 1
(EY325902) CAWY11240.fwd CAWY Helobdella robusta Subtracted ... 66 3e-06 1
(FG542487) OtP020H11_021607f Onthophagus taurus pupal librar... 36 0.040 2
(CP000882) Hemiselmis andersenii chromosome 2, complete sequ... 52 0.050 1
(DN248454) ACAE-aaa31a18.g1 Hydra EST UCI 5 Hydra magnipapil... 38 0.075 3
(EE831557) 020605ONLN013086HT ONLN Ovis aries cDNA, mRNA seq... 36 0.15 2
(EE755722) 020605OCS411027040HT OCS4 Ovis aries cDNA, mRNA s... 36 0.15 2
(GO777959) 010628OFSA021719HT OFSA Ovis aries cDNA 5', mRNA ... 36 0.15 2
(EL569989) Physarum09689 Physarum polycephalum starvation st... 46 0.19 2
(EL569099) Physarum09686 Physarum polycephalum starvation st... 46 0.19 2
(EL573123) Physarum02395 Physarum polycephalum starvation st... 46 0.21 2
(AL161788) Human DNA sequence from clone RP11-421B23 on chro... 36 0.43 2
(GO780659) 010709OFSA027405HT OFSA Ovis aries cDNA 5', mRNA ... 34 0.57 2
(EL572689) Physarum09687 Physarum polycephalum starvation st... 46 0.62 2
(ES415219) SA_MX1_66f06_SP6 Dogfish Shark Multiple Tissues, ... 40 0.64 2
(EL578154) Physarum01710 Physarum polycephalum starvation st... 44 0.71 2
(EL564696) Physarum07457 Physarum polycephalum starvation st... 44 0.74 2
(AL031257) Human DNA sequence from clone RP4-796I11 on chrom... 36 0.75 4
(CF765242) CES002497 Bos taurus skin cDNA library Bos taurus... 48 0.78 1
(EE340810) LB02534.CR_M05 GC_BGC-25 Bos taurus cDNA clone IM... 34 1.5 3
(CU928060) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 1.7 4
(AC184429) Strongylocentrotus purpuratus clone R3-3089I6, WO... 36 2.2 9
(AC212661) Solanum lycopersicum chromosome 7 clone C07SLm014... 38 2.6 6
(FF577990) TTED836THB Tetrahymena thermophila conjugation cD... 44 2.8 2
(BX119972) Zebrafish DNA sequence from clone RP71-31E16 in l... 38 2.9 3
(EB561792) AGENCOURT_50937927 D. virilis EST Drosophila viri... 42 3.0 2
(CR788305) Zebrafish DNA sequence from clone DKEYP-59G5 in l... 46 3.1 1
(CT486008) Mouse DNA sequence from clone RP24-112G3 on chrom... 46 3.1 1
(AC132612) Mus musculus BAC clone RP23-388L8 from chromosome... 46 3.1 1
(AC220983) Pongo abelii BAC clone CH276-269G8 from chromosom... 46 3.1 1
(AJ010592) Guillardia theta DNA for complete sequence of nuc... 46 3.1 1
(AZ234416) RPCI-23-81L5.TV RPCI-23 Mus musculus genomic clon... 46 3.1 1
(AQ992713) RPCI-23-355D5.TV RPCI-23 Mus musculus genomic clo... 46 3.1 1
(CZ532859) SRAA-aac81c08.g1 Strongyloides ratti whole genome... 46 3.1 1
(AG558069) Mus musculus molossinus DNA, clone:MSMg01-476H20.... 46 3.1 1
(AG314712) Mus musculus molossinus DNA, clone:MSMg01-098J01.... 46 3.1 1
(CP001291) Cyanothece sp. PCC 7424, complete genome. 46 3.1 1
(FH279718) CHO_OF4176xb04f1.ab1 CHO_OF4 Nicotiana tabacum ge... 40 3.1 2
(CU302334) Medicago truncatula chromosome 5 clone mth2-5j11,... 32 3.7 8
(AF063866) Melanoplus sanguinipes entomopoxvirus, complete g... 36 3.9 10
(BX289389) Arabidopsis thaliana T-DNA flanking sequence GK-4... 40 4.0 2
(CP000395) Borrelia afzelii PKo, complete genome. 38 4.8 16
(AC087273) Homo sapiens chromosome 8, clone RP11-156K13, com... 42 4.9 5
(FH407957) CHO_OF4300xc24f1.ab1 CHO_OF4 Nicotiana tabacum ge... 38 5.0 2
(AC092362) Homo sapiens chromosome 5 clone RP11-392P13, WORK... 42 5.3 3
(AC131417) Rattus norvegicus clone CH230-293F6, WORKING DRAF... 36 5.4 6
(AB018696) Xenopus laevis RanBPM mRNA, complete cds. 38 5.4 3
(AC079813) Homo sapiens chromosome 3 clone RP11-413E19, WORK... 32 5.7 2
(DL005611) NUCLEIC ACID PROBES AND NUCLEIC ACID ANALOG PROBES. 32 5.7 2
(CS459536) Sequence 17 from Patent WO2006117596. 32 5.7 2
(AC084358) Homo sapiens 12p BAC RP11-418C2 (Roswell Park Can... 32 5.8 2
(GN009435) Sequence 1876 from Patent EP2014669. 32 6.1 2
(AC103775) Homo sapiens chromosome 8 clone RP11-413F22 map 8... 32 6.1 2
(U63313) Human cosmid LL12NC01-88A9, ETV6 gene, exons 6, 7 a... 32 6.3 2
(FH111368) CHO_OF3058xm06r1.ab1 CHO_OF3 Nicotiana tabacum ge... 38 6.6 2
(AC138069) Homo sapiens chromosome 3 clone RP13-546I2, compl... 40 6.7 5
(AC170073) Loxodonta africana clone VMRC15-334G8, WORKING DR... 44 6.8 3
(EI984730) SB_BBc50-H14.R SB_BBc Sorghum bicolor genomic 3',... 32 7.6 2
(BH137972) ENTOA01TF Entamoeba histolytica Sheared DNA Entam... 34 7.7 2
(AZ676681) ENTMG36TF Entamoeba histolytica Sheared DNA Entam... 34 7.7 2
(BH149825) ENTPQ52TR Entamoeba histolytica Sheared DNA Entam... 34 7.7 2
(AZ675173) ENTKU40TF Entamoeba histolytica Sheared DNA Entam... 34 7.7 2
(AZ536181) ENTCR20TF Entamoeba histolytica Sheared DNA Entam... 34 7.7 2
(FK854542) K30541B03 Karenia brevis Multi-strain Library Kar... 32 7.7 2
(ES400523) MUT11-M03.x1d-t SHGC-MUT Mytilus californianus cD... 38 8.2 3
(BJ386892) Dictyostelium discoideum cDNA clone:dds11o06, 5' ... 38 8.6 2
(CP001357) Brachyspira hyodysenteriae WA1, complete genome. 36 9.4 17
(AC155731) Mus musculus clone RP24-211F9, WORKING DRAFT SEQU... 40 9.4 5
(EX817484) CBNA5586.fwd CBNA Phycomyces blakesleeanus NRRL15... 38 9.9 2
(CU468262) M.truncatula DNA sequence from clone MTH2-34E14 o... 36 10.0 3
>(BJ433174) Dictyostelium discoideum cDNA clone:ddv21b05, 3' end,
single read.
Length = 651
Score = 1098 bits (554), Expect = 0.0
Identities = 557/557 (100%)
Strand = Plus / Minus
Query: 475 cttatttaatgcatcatggttatagtgaaactgttaaactatttgcaaaagctactggta 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 cttatttaatgcatcatggttatagtgaaactgttaaactatttgcaaaagctactggta 592
Query: 535 ctgatggtgattctttaaattcacaattagatgatataaaaaatagacaaagaatatcag 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 ctgatggtgattctttaaattcacaattagatgatataaaaaatagacaaagaatatcag 532
Query: 595 aattattatcaaaagggaatatagatgaagttattaaagagttggataatatttatccaa 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 aattattatcaaaagggaatatagatgaagttattaaagagttggataatatttatccaa 472
Query: 655 attttttaacacaaaatagagatattcaatttaaattattatgtcaaaagtttatagaga 714
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 attttttaacacaaaatagagatattcaatttaaattattatgtcaaaagtttatagaga 412
Query: 715 tgattaaaacatcaccaattgaagagacgatggcatttggacaaaatcaactatcaaact 774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 tgattaaaacatcaccaattgaagagacgatggcatttggacaaaatcaactatcaaact 352
Query: 775 tttcatttgagtcaaaagaatgcgaatcaaacctaaatgaaattttctcattgatagctt 834
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 tttcatttgagtcaaaagaatgcgaatcaaacctaaatgaaattttctcattgatagctt 292
Query: 835 attcagatccatatacaagtccagtttcatttttattagaaaagagtaaaagagatcaaa 894
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 attcagatccatatacaagtccagtttcatttttattagaaaagagtaaaagagatcaaa 232
Query: 895 ttataaatgatttaaattgcgcattattagtatattgtcataaaccagcaactcctgttt 954
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 ttataaatgatttaaattgcgcattattagtatattgtcataaaccagcaactcctgttt 172
Query: 955 tagagaaaatcgttaaacaagcaaaagttgctattgatcaagttgtttatcaaaatgcna 1014
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 tagagaaaatcgttaaacaagcaaaagttgctattgatcaagttgtttatcaaaatgcna 112
Query: 1015 gtcccgccgctgctttc 1031
|||||||||||||||||
Sbjct: 111 gtcccgccgctgctttc 95
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 108600042
Number of Hits to DB: 1,501,831,797
Number of extensions: 89306734
Number of successful extensions: 7307999
Number of sequences better than 10.0: 75
Length of query: 1124
Length of database: 106,710,029,556
Length adjustment: 24
Effective length of query: 1100
Effective length of database: 104,103,628,548
Effective search space: 114513991402800
Effective search space used: 114513991402800
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
Dictyostelium discoideum cDNA Project Home