Dictyostelium discoideum cDNA Contig-U10443-1

Assembled

Chromosomal Location of Contig-U10443-1

Sequence Contig-U10443-1

GTAAATATTA ATATAATNAA AATGTTAAGA ATAACAGAAT TTCTAACTTA
CGTACTTTTG GTCAACGTTT CTTCTCAACT GAACAACAAG ATGTTGTTGT
TATTGGTGGT GGACCAGGTG GTTATGTTGC AGGTATTAAA GCAGGTCAAT
TAGGTATGAA AGTTACAGTT GTAGAGAAAA GAGGTAAATT AGGAGGAACA
TGTTTAAATG TTGGTTGTAT TCCATCAAAA GCATTATTGA ATGCATCACA
TCTTTATGAA GAAGCCACCA CTAAAATGTC CAAATATGGT GTCAAATGTT
CAGGTGTTGA ATTAGATTTG GGAGCAATGA TGCAATACAA AGATAAATCA
GTCAGTGGCT TAACATCAGG TATTGAAGGT TTATTCAAAA AGAACAAAGT
AAAATATGAT AAAGGTTTCA CTGGTACTCT CGAAGCTGAT GCTGTCCTTG
TCTCTGTTGG TCGTCGTCCA AATACTAGTG GTCTTGGTCT TGAATCAGTT
GGTATCCCAA CCGATAAAGC TGGTCGTGTC GAAGTTGGAG ATCACTTTAA
CACTAAAGTT CCATCAATTT TCGCAATTGG TGATGCCATC CGTGGTCCAA
TGCTTGCTCA CAAAGCTGAA NAANAAGGTA TTGCTATCAT TGAACAAATT
CACAATGGTG GTGGTCATGT TAACTATGGT GCCATCCCAT CCATTATNTA
CACTCACCCA NAAGTTGCTT GGGTTGGTAA GACTGAANAA GAATTACAAA
AANAAGGTAT CCAATACAAT ATTGGTANAT TCCCATTCGT TGCAAACTCT
ANAGCCAAAA CAAACGATGA TGTCGAAGGT TTCGTTAAAT TCCTCGCCGC
TAAAGATTCT GATANAGNCC TTGGNGCTCA TATTATGGGN ACCAATGCTG
GTGAATTAAT TGGTGAATGT GTTTTAGCTA TGGAATATGG TGCCTCATGT
GAAGATATTG CAAGAACNTG TCAAGGTCAT CCAACTTTAN CCGAAGCTGT
TAAANAAGCT GCTATGGANG CNTACGATAA GCCNATCCAT ATGTAATCAA
TTTTAAAAAA AAAAACAAAA TATAAATAAA AAAT

Translated Amino Acid Sequence Contig-U10443-1

ky*YNXNVKNNRISNLRTFGQRFFSTEQQDVVVIGGGPGGYVAGIKAGQLGMKVTVVEKR
GKLGGTCLNVGCIPSKALLNASHLYEEATTKMSKYGVKCSGVELDLGAMMQYKDKSVSGL
TSGIEGLFKKNKVKYDKGFTGTLEADAVLVSVGRRPNTSGLGLESVGIPTDKAGRVEVGD
HFNTKVPSIFAIGDAIRGPMLAHKAEXXGIAIIEQIHNGGGHVNYGAIPSIXYTHPXVAW
VGKTEXELQKXGIQYNIGXFPFVANSXAKTNDDVEGFVKFLAAKDSDXXLGAHIMGTNAG
ELIGECVLAMEYGASCEDIARTCQGHPTLXEAVKXAAMXAYDKPIHM*silkkktkyk*k

Homology Contig-U10443-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U10443-1 (Contig-U10443-1Q) /CSM_Contig/Conti...  1976  0.0
Contig-U13825-1 (Contig-U13825-1Q) /CSM_Contig/Conti...  1142  0.0
Contig-U01125-1 (Contig-U01125-1Q) /CSM_Contig/Conti...    42  0.001
Contig-U12131-1 (Contig-U12131-1Q) /CSM_Contig/Conti...    38  0.019
Contig-U10397-1 (Contig-U10397-1Q) /CSM_Contig/Conti...    38  0.019
Contig-U11512-1 (Contig-U11512-1Q) /CSM_Contig/Conti...    36  0.077
Contig-U10328-1 (Contig-U10328-1Q) /CSM_Contig/Conti...    36  0.077
Contig-U09489-1 (Contig-U09489-1Q) /CSM_Contig/Conti...    36  0.077
Contig-U13894-1 (Contig-U13894-1Q) /CSM_Contig/Conti...    34  0.30
Contig-U13716-1 (Contig-U13716-1Q) /CSM_Contig/Conti...    34  0.30

Homology Contig-U10443-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ414663) Dictyostelium discoideum cDNA clone:ddv20d02, 5' ...  1205   0.0    1
(BJ340901) Dictyostelium discoideum cDNA clone:dda4h08, 3' e...  1142   0.0    1
(BJ434271) Dictyostelium discoideum cDNA clone:ddv16j12, 3' ...  1094   0.0    2
(BJ430662) Dictyostelium discoideum cDNA clone:ddv8n03, 3' e...  1094   0.0    2
(BJ430115) Dictyostelium discoideum cDNA clone:ddv6k06, 3' e...  1094   0.0    2
(BJ402363) Dictyostelium discoideum cDNA clone:dds16c18, 3' ...  1094   0.0    1
(BJ378007) Dictyostelium discoideum cDNA clone:ddc26b23, 3' ...  1094   0.0    2
(BJ342090) Dictyostelium discoideum cDNA clone:dda9a13, 3' e...  1094   0.0    2
(BJ341707) Dictyostelium discoideum cDNA clone:dda7g20, 3' e...  1094   0.0    2
(BJ341135) Dictyostelium discoideum cDNA clone:dda5k08, 3' e...  1094   0.0    2

Homology Contig-U10443-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


AP007171_417(AP007171|pid:none) Aspergillus oryzae RIB40 genomic...   254   3e-66
AF542528_19(AF542528|pid:none) Cryptococcus neoformans var. grub...   253   6e-66
AY710429_12(AY710429|pid:none) Cryptococcus gattii strain E566 M...   252   1e-65
AY710430_14(AY710430|pid:none) Cryptococcus gattii strain WM276 ...   251   4e-65
AE017344_576(AE017344|pid:none) Cryptococcus neoformans var. neo...   248   2e-64
AM270136_18(AM270136|pid:none) Aspergillus niger contig An07c019...   248   3e-64
CR382130_836(CR382130|pid:none) Yarrowia lipolytica strain CLIB1...   246   8e-64
AF295339_1(AF295339|pid:none) Solanum tuberosum dihydrolipoamide...   245   2e-63
DQ674546_1(DQ674546|pid:none) Coccidioides posadasii dihydrolipo...   245   2e-63
Z82277_3(Z82277|pid:none) Caenorhabditis elegans Cosmid LLC1, co...   244   4e-63