<Clone: Contig-U10415-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>

Dictyostelium discoideum cDNA Contig-U10415-1

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Assembled

Chromosomal Location of Contig-U10415-1

< more Chromosomal info >

Chromosome Number 4
Length 5430582
Start Poin 4,743,710
End Point 4,742,756
Strand MINUS

Sequence Contig-U10415-1

AATATTAATT ATAATAATAA AAAAAATGAA TTATTTGGAA AATATCAACA
ACAACAACAA CAACAACAAA GATTAAATTA TTCAACACAT GTTAAAGAGG
AAATGGGAGA AAATAAAAAA AAGACAGTTT TAGATATTTT AAAGAAATAT
AAAGATGGTA TACCAATTTC AATGGTTACA GCATATGATT TTACAAGTTC
AAAGATAGTT GATAAATCAG GAATGGATAT GATACTGGTG GGAGATTCAT
TAGGTATGGT TATGAATGGT GAGAGTGGTA CAACATCAGT GACAATGGAA
CAAATGATTT ATCATTGTAA ATCAGTGATG AAAGGTAGTA AAAGGTCATT
TGTAGTTGGT GATATGCCAT TCGGTAGTTA TGAAACATCA ACAAAAGATG
CGGTTTCAAA TGCAATTCGT TTAATAAAGG AAGGTGGTGT TGATGCTATT
AAATTGGAAG GTGGTAAAAA ACAATTTGAA AAGATTAAAG CAATTTGTGA
TACTGGTATA TTGGTTGTCG GCCATATTGG TCTAACACCA CAAACTTCAA
CTTCACTAGG TGGATTTAAA TTACAGGGTA AAACCGAACA AGAAGCATTA
TCATTATTAG AGNACGCAAA ATCATTACAA GAAGCAGGTT GTTTTGNTAT
TGTTTTANAA ATGGTACCTC ATGCAACCGC TGTGGCCATA ACTAATACCC
TATCGATTCC AACCATTGGT ATTGGTGCTG GTAATGGTAC AAGTGGTCAA
GTTTTAGTTT ATCATGATCT ATTGGGACNA TATTCAGATT TCGTCCCTAA
ATTTTGTAAA CAATATGCAA CACTATCAGA AAATATTGAT CAATCTTTGA
AAAACTATAA AAATGAAGTT GAATCAANAG AATTTCCATC ACCTACTCAT
TCTTTCTCAA TGANAGAATC TGAATTATCA CCATTTTTAG AATAAAAATT
ATAA

Translated Amino Acid Sequence Contig-U10415-1

<All Frames> 
NINYNNKKNELFGKYQQQQQQQQRLNYSTHVKEEMGENKKKTVLDILKKYKDGIPISMVT
AYDFTSSKIVDKSGMDMILVGDSLGMVMNGESGTTSVTMEQMIYHCKSVMKGSKRSFVVG
DMPFGSYETSTKDAVSNAIRLIKEGGVDAIKLEGGKKQFEKIKAICDTGILVVGHIGLTP
QTSTSLGGFKLQGKTEQEALSLLEXAKSLQEAGCFXIVLXMVPHATAVAITNTLSIPTIG
IGAGNGTSGQVLVYHDLLGXYSDFVPKFCKQYATLSENIDQSLKNYKNEVESXEFPSPTH
SFSMXESELSPFLE*kl*


Homology Contig-U10415-1 vs CSM-Contig

<more CONTIG info> 
Sequences producing significant alignments:                        (bits)  Value


Contig-U10415-1 (Contig-U10415-1Q) /CSM_Contig/Conti...  1671  0.0
Contig-U13062-1 (Contig-U13062-1Q) /CSM_Contig/Conti...    40  0.004
Contig-U12128-1 (Contig-U12128-1Q) /CSM_Contig/Conti...    40  0.004
Contig-U11697-1 (Contig-U11697-1Q) /CSM_Contig/Conti...    40  0.004
Contig-U01332-1 (Contig-U01332-1Q) /CSM_Contig/Conti...    40  0.004
Contig-U14806-1 (Contig-U14806-1Q) /CSM_Contig/Conti...    38  0.017
Contig-U09597-1 (Contig-U09597-1Q) /CSM_Contig/Conti...    38  0.017
Contig-U10373-1 (Contig-U10373-1Q) /CSM_Contig/Conti...    36  0.067
Contig-U04014-1 (Contig-U04014-1Q) /CSM_Contig/Conti...    36  0.067
Contig-U14471-1 (Contig-U14471-1Q) /CSM_Contig/Conti...    34  0.27


Homology Contig-U10415-1 vs DNA

<more DNA info> 
Sequences producing significant alignments:                  (bits) Value  N


(BJ432079) Dictyostelium discoideum cDNA clone:ddv17e17, 3' ...  1320   0.0    1
(BJ413963) Dictyostelium discoideum cDNA clone:ddv17e17, 5' ...   799   0.0    4
(EK587085) 1095522117106 Global-Ocean-Sampling_GS-32-01-01-1...    40   1e-05  4
(GN128174) Sequence 11070 from Patent WO2009037329.                54   1e-05  2
(AL407653) T3 end of clone AV0AA003F05 of library AV0AA from...    58   6e-05  2
(GN128078) Sequence 10974 from Patent WO2009037329.                40   2e-04  3
(DL168956) Methods for Identifying the Target of a Compound ...    46   7e-04  2
(DJ374691) Identification of Essential Genes in Prokaryotes.       46   7e-04  2
(DL171692) Methods for Identifying the Target of a Compound ...    46   7e-04  2
(DJ377427) Identification of Essential Genes in Prokaryotes.       46   7e-04  2


Homology Contig-U10415-1 vs Protein

<more Protein info> 
Sequences producing significant alignments:                      (bits) Value


CP001078_1601(CP001078|pid:none) Clostridium botulinum E3 str. A...   265   2e-69
AL132962_13(AL132962|pid:none) Arabidopsis thaliana DNA chromoso...   261   2e-68
GN128072_1(GN128072|pid:none) Sequence 10968 from Patent WO20090...   258   2e-67
AP002900_4(AP002900|pid:none) Oryza sativa Japonica Group genomi...   258   2e-67
AM920427_804(AM920427|pid:none) Penicillium chrysogenum Wisconsi...   258   2e-67
CP001147_271(CP001147|pid:none) Thermodesulfovibrio yellowstonii...   253   7e-66
CP001197_2924(CP001197|pid:none) Desulfovibrio vulgaris str. 'Mi...   253   9e-66
CP001329_201(CP001329|pid:none) Micromonas sp. RCC299 chromosome...   251   2e-65
EU965724_1(EU965724|pid:none) Zea mays clone 288295 3-methyl-2-o...   251   3e-65
(A0PXQ3) RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltran...   251   3e-65


<Clone: Contig-U10415-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>

Dictyostelium discoideum cDNA Project Home