Homology Contig-U10410-1 vs Protein

Query= Contig-U10410-1 (Contig-U10410-1Q) /CSM_Contig/Contig-U10410-1Q.Seq.d
         (1100 letters)

Database: nrp_A
           3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB004538_3(AB004538|pid:none) Schizosaccharomyces pombe 39 kb ge...   129   2e-28
BC167497_1(BC167497|pid:none) Xenopus laevis hypothetical protei...   114   5e-24
(A1L1R0) RecName: Full=Protein SHQ1 homolog;  &BC129178_1(BC1291...   113   1e-23
AK001401_1(AK001401|pid:none) Homo sapiens cDNA FLJ10539 fis, cl...   112   3e-23
BC047879_1(BC047879|pid:none) Homo sapiens SHQ1 homolog (S. cere...   112   3e-23
CS185618_1(CS185618|pid:none) Sequence 101 from Patent EP1591448.     108   4e-22
BT045391_1(BT045391|pid:none) Salmo salar clone ssal-rgf-520-036...   107   1e-21
(Q9TYM6) RecName: Full=Protein SHQ1 homolog;  &AF125455_2(AF1254...    98   4e-19
BT076287_1(BT076287|pid:none) Caligus rogercresseyi clone crog-e...    94   8e-18
T33900(T33900)hypothetical protein Y48A5A.1 - Caenorhabditis ele...    86   2e-15
FN376312_9(FN376312|pid:none) Schistosoma mansoni genome sequenc...    84   1e-14
FM992689_528(FM992689|pid:none) Candida dubliniensis CD36 chromo...    81   6e-14
CU928171_415(CU928171|pid:none) Kluyveromyces thermotolerans str...    77   8e-13
CR382132_925(CR382132|pid:none) Yarrowia lipolytica strain CLIB1...    76   2e-12
AY810175_1(AY810175|pid:none) Schistosoma japonicum SJCHGC07166 ...    74   9e-12
CU928176_105(CU928176|pid:none) Zygosaccharomyces rouxii strain ...    70   2e-10
CR382126_172(CR382126|pid:none) Kluyveromyces lactis strain NRRL...    70   2e-10
(P40486) RecName: Full=Protein SHQ1; AltName: Full=Small nucleol...    60   1e-07
AM502250_433(AM502250|pid:none) Leishmania infantum chromosome 32.     56   3e-06
(Q9VI74) RecName: Full=Protein SHQ1 homolog;  &AE014297_582(AE01...    49   4e-04
AC024810_9(AC024810|pid:none) Caenorhabditis elegans cosmid Y54E...    35   6.1
BX538353_73(BX538353|pid:none) Cryptosporidium parvum chromosome...    34   7.9

>AB004538_3(AB004538|pid:none) Schizosaccharomyces pombe 39 kb
           genomic DNA, clone c568.
          Length = 405

 Score =  129 bits (324), Expect = 2e-28
 Identities = 66/180 (36%), Positives = 95/180 (52%), Gaps = 1/180 (0%)
 Frame = +1

Query: 421 SKKLITFSDEEKDIMKNLPNKEYMISNEKSILLGLVDIIYSYAYNERVNMGYENIESAWN 600
           S +L+ F+ EEK+ +  LP + Y+I N K++ L LV +I++YAY+ R  +G   IES WN
Sbjct: 203 SDRLLEFTSEEKEALAKLPKRSYLIDNPKNVYLCLVPLIFAYAYDNRTTLGDPTIESCWN 262

Query: 601 ICKLSGTLSCLD-NFYNLSSVLECCFKRSLTFPLYRSWLLSERVLRDTKQIFQLGKRSXX 777
           I  LS T+SCLD NF  +  +   C +RSL +PLYR+W L+    +DT  I  LGKR
Sbjct: 263 IGTLSSTISCLDTNFLAIKDIFIACIRRSLAYPLYRNWDLALTCWKDTHAILSLGKRWIL 322

Query: 778 XXXXXXXXXXESSEFKYYLNRLYIDDYCIWLQHAXXXXXXXXXXXXXEYEMKKSMISWPL 957
                     E  +  Y  N + ++DY  W+Q A             E  + K   +WPL
Sbjct: 323 RVLLRIRNLFEHHDVYYIYNAIVLNDYAYWIQTANDNVLAALAYQVSECTITKEETNWPL 382

Lambda     K      H
   0.315    0.133    0.384

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 918,662,967
Number of extensions: 15026903
Number of successful extensions: 46872
Number of sequences better than 10.0: 22
Number of HSP's gapped: 46736
Number of HSP's successfully gapped: 22
Length of query: 366
Length of database: 1,040,966,779
Length adjustment: 130
Effective length of query: 236
Effective length of database: 624,409,729
Effective search space: 147360696044
Effective search space used: 147360696044
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 32 (16.9 bits)